RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.05■□□□□ 0.32
PDLIM7-214ENST00000505746 CDCA7Q9BWT1 371 aaPredicted RBP17.05■□□□□ 0.32
PDLIM7-214ENST00000505746 SLC24A1O60721 1099 aa17.04■□□□□ 0.32
PDLIM7-214ENST00000505746 CSB-PGBD3P0DP91 1061 aa17.04■□□□□ 0.32
PDLIM7-214ENST00000505746 TERF2IPQ9NYB0 399 aa17.04■□□□□ 0.32
PDLIM7-214ENST00000505746 R3HDM1Q15032 1099 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-214ENST00000505746 CARD10Q9BWT7 1032 aa17.03■□□□□ 0.32
PDLIM7-214ENST00000505746 SLC12A5Q9H2X9 1139 aa17.03■□□□□ 0.32
PDLIM7-214ENST00000505746 USP31Q70CQ4 1352 aa17.02■□□□□ 0.32
PDLIM7-214ENST00000505746 NME9Q86XW9 330 aa17.01■□□□□ 0.31
PDLIM7-214ENST00000505746 OVOS2A0A0G2JMS6 1433 aa17.01■□□□□ 0.31
PDLIM7-214ENST00000505746 OVOS2A0A0J9YW53 1432 aa17.01■□□□□ 0.31
PDLIM7-214ENST00000505746 OVOS2Q6IE36 1432 aa17.01■□□□□ 0.31
PDLIM7-214ENST00000505746 AKAP12Q02952 1782 aa17■□□□□ 0.31
PDLIM7-214ENST00000505746 NBPF14Q5TI25 921 aa17■□□□□ 0.31
PDLIM7-214ENST00000505746 TNS1Q9HBL0 1735 aaKnown RBP17■□□□□ 0.31
PDLIM7-214ENST00000505746 CD163L1Q9NR16 1453 aa16.99■□□□□ 0.31
PDLIM7-214ENST00000505746 ST20-MTHFSA0A0A6YYL1 179 aa16.99■□□□□ 0.31
PDLIM7-214ENST00000505746 PARP4Q9UKK3 1724 aaKnown RBP16.99■□□□□ 0.31
PDLIM7-214ENST00000505746 EDC4Q6P2E9 1401 aaKnown RBP16.98■□□□□ 0.31
PDLIM7-214ENST00000505746 COL18A1P39060 1754 aa16.98■□□□□ 0.31
PDLIM7-214ENST00000505746 NFAT5O94916 1531 aa16.98■□□□□ 0.31
PDLIM7-214ENST00000505746 EXOC5O00471 708 aa16.98■□□□□ 0.31
PDLIM7-214ENST00000505746 TESK2Q96S53 571 aa16.98■□□□□ 0.31
PDLIM7-214ENST00000505746 CCDC7Q96M83 1385 aa16.98■□□□□ 0.31
PDLIM7-214ENST00000505746 BCL11BQ9C0K0 894 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-214ENST00000505746 NINLQ9Y2I6 1382 aa16.97■□□□□ 0.31
PDLIM7-214ENST00000505746 ABCC6O95255 1503 aa16.96■□□□□ 0.31
PDLIM7-214ENST00000505746 PLSCR1O15162 318 aa16.96■□□□□ 0.31
PDLIM7-214ENST00000505746 MARCH10Q8NA82 808 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-214ENST00000505746 A0A1W2PP64 1363 aa16.96■□□□□ 0.31
PDLIM7-214ENST00000505746 LRP5O75197 1615 aa16.96■□□□□ 0.3
PDLIM7-214ENST00000505746 MON2Q7Z3U7 1717 aa16.95■□□□□ 0.3
PDLIM7-214ENST00000505746 NLRP2Q9NX02 1062 aa16.94■□□□□ 0.3
PDLIM7-214ENST00000505746 BCL9O00512 1426 aa16.94■□□□□ 0.3
PDLIM7-214ENST00000505746 ERBB3P21860 1342 aa16.94■□□□□ 0.3
PDLIM7-214ENST00000505746 ANKRD24Q8TF21 1146 aa16.93■□□□□ 0.3
PDLIM7-214ENST00000505746 LRRC37A3O60309 1634 aa16.92■□□□□ 0.3
PDLIM7-214ENST00000505746 TMF1P82094 1093 aa16.92■□□□□ 0.3
PDLIM7-214ENST00000505746 COG3Q96JB2 828 aa16.92■□□□□ 0.3
PDLIM7-214ENST00000505746 PEAK1Q9H792 1746 aa16.9■□□□□ 0.3
PDLIM7-214ENST00000505746 IL2RBP14784 551 aa16.9■□□□□ 0.3
PDLIM7-214ENST00000505746 IP6K1Q92551 441 aa16.9■□□□□ 0.3
PDLIM7-214ENST00000505746 USP54Q70EL1 1684 aa16.89■□□□□ 0.29
PDLIM7-214ENST00000505746 PTF1AQ7RTS3 328 aa16.89■□□□□ 0.29
PDLIM7-214ENST00000505746 TIMELESSQ9UNS1 1208 aa16.89■□□□□ 0.29
PDLIM7-214ENST00000505746 USP47Q96K76 1375 aa16.89■□□□□ 0.29
PDLIM7-214ENST00000505746 TNS2Q63HR2 1409 aa16.88■□□□□ 0.29
PDLIM7-214ENST00000505746 CDCA8Q53HL2 280 aa16.88■□□□□ 0.29
PDLIM7-214ENST00000505746 ANKRD36BQ8N2N9 1353 aa16.88■□□□□ 0.29
PDLIM7-214ENST00000505746 RREB1Q92766 1687 aa16.88■□□□□ 0.29
PDLIM7-214ENST00000505746 RGPD5Q99666 1765 aa16.85■□□□□ 0.29
PDLIM7-214ENST00000505746 AMPHP49418 695 aa16.85■□□□□ 0.29
PDLIM7-214ENST00000505746 PROM2Q8N271 834 aa16.85■□□□□ 0.29
PDLIM7-214ENST00000505746 LTV1Q96GA3 475 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-214ENST00000505746 SPON1Q9HCB6 807 aa16.85■□□□□ 0.29
PDLIM7-214ENST00000505746 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
PDLIM7-214ENST00000505746 KCNQ2O43526 872 aa16.84■□□□□ 0.29
PDLIM7-214ENST00000505746 TXNRD1Q16881 649 aa16.84■□□□□ 0.29
PDLIM7-214ENST00000505746 MAP3K19Q56UN5 1328 aa16.84■□□□□ 0.29
PDLIM7-214ENST00000505746 CLSPNQ9HAW4 1339 aa16.84■□□□□ 0.29
PDLIM7-214ENST00000505746 WNK3Q9BYP7 1800 aa16.84■□□□□ 0.29
PDLIM7-214ENST00000505746 HOXC9P31274 260 aa16.83■□□□□ 0.28
PDLIM7-214ENST00000505746 ACSBG1Q96GR2 724 aa16.83■□□□□ 0.28
PDLIM7-214ENST00000505746 FYB1O15117 783 aa16.82■□□□□ 0.28
PDLIM7-214ENST00000505746 ANO8Q9HCE9 1232 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-214ENST00000505746 PPP1R1BQ9UD71 204 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-214ENST00000505746 RGPD3A6NKT7 1758 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-214ENST00000505746 RGPD4Q7Z3J3 1758 aa16.82■□□□□ 0.28
PDLIM7-214ENST00000505746 FBLN1P23142 703 aa16.81■□□□□ 0.28
PDLIM7-214ENST00000505746 PCGF6Q9BYE7 350 aa16.81■□□□□ 0.28
PDLIM7-214ENST00000505746 GGNBP2Q9H3C7 697 aa16.81■□□□□ 0.28
PDLIM7-214ENST00000505746 STK32BQ9NY57 414 aa16.81■□□□□ 0.28
PDLIM7-214ENST00000505746 LTN1O94822 1766 aa16.8■□□□□ 0.28
PDLIM7-214ENST00000505746 SBF2Q86WG5 1849 aa16.8■□□□□ 0.28
PDLIM7-214ENST00000505746 SLC15A2Q16348 729 aa16.79■□□□□ 0.28
PDLIM7-214ENST00000505746 DDX54Q8TDD1 881 aaKnown RBP16.79■□□□□ 0.28
PDLIM7-214ENST00000505746 RTL1A6NKG5 1358 aa16.78■□□□□ 0.28
PDLIM7-214ENST00000505746 RRS1Q15050 365 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-214ENST00000505746 ZCRB1Q8TBF4 217 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-214ENST00000505746 SMG6Q86US8 1419 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-214ENST00000505746 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
PDLIM7-214ENST00000505746 ZBTB7AO95365 584 aa16.74■□□□□ 0.27
PDLIM7-214ENST00000505746 NBPF6Q5VWK0 638 aa16.74■□□□□ 0.27
PDLIM7-214ENST00000505746 NBPF4Q96M43 638 aa16.74■□□□□ 0.27
PDLIM7-214ENST00000505746 CARD14Q9BXL6 1004 aa16.74■□□□□ 0.27
PDLIM7-214ENST00000505746 PDGFDQ9GZP0 370 aaPredicted RBP16.74■□□□□ 0.27
PDLIM7-214ENST00000505746 NHSQ6T4R5 1651 aa16.74■□□□□ 0.27
PDLIM7-214ENST00000505746 CGNL1Q0VF96 1302 aa16.73■□□□□ 0.27
PDLIM7-214ENST00000505746 RAPGEF4Q8WZA2 1011 aa16.73■□□□□ 0.27
PDLIM7-214ENST00000505746 KIF24Q5T7B8 1368 aa16.73■□□□□ 0.27
PDLIM7-214ENST00000505746 FAM208AQ9UK61 1670 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-214ENST00000505746 HSP90AB2PQ58FF8 381 aa16.72■□□□□ 0.27
PDLIM7-214ENST00000505746 SLC27A3Q5K4L6 730 aa16.72■□□□□ 0.27
PDLIM7-214ENST00000505746 SYTL4Q96C24 671 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-214ENST00000505746 INSRP06213 1382 aa16.72■□□□□ 0.27
PDLIM7-214ENST00000505746 PRIM1P49642 420 aaKnown RBP16.71■□□□□ 0.27
PDLIM7-214ENST00000505746 ATF5Q9Y2D1 282 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-214ENST00000505746 FLT4P35916 1363 aa16.71■□□□□ 0.27
PDLIM7-214ENST00000505746 NSD3Q9BZ95 1437 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms