RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.43■□□□□ 0.22
LETM1-203ENST00000505551 SYNMO15061 1565 aa16.42■□□□□ 0.22
LETM1-203ENST00000505551 RBSNQ9H1K0 784 aa16.42■□□□□ 0.22
LETM1-203ENST00000505551 SSFA2P28290 1259 aa16.42■□□□□ 0.22
LETM1-203ENST00000505551 MYRIPQ8NFW9 859 aa16.42■□□□□ 0.22
LETM1-203ENST00000505551 NPC1L1Q9UHC9 1359 aa16.42■□□□□ 0.22
LETM1-203ENST00000505551 IQGAP1P46940 1657 aa16.41■□□□□ 0.22
LETM1-203ENST00000505551 BAG4O95429 457 aaKnown RBP16.41■□□□□ 0.22
LETM1-203ENST00000505551 CABP2Q9NPB3 220 aa16.41■□□□□ 0.22
LETM1-203ENST00000505551 TNNQ9UQP3 1299 aa16.41■□□□□ 0.22
LETM1-203ENST00000505551 MYOM2P54296 1465 aa16.4■□□□□ 0.22
LETM1-203ENST00000505551 ZSCAN23Q3MJ62 389 aa16.4■□□□□ 0.22
LETM1-203ENST00000505551 CCDC39Q9UFE4 941 aa16.4■□□□□ 0.22
LETM1-203ENST00000505551 RICTORQ6R327 1708 aa16.4■□□□□ 0.22
LETM1-203ENST00000505551 SIGLEC1Q9BZZ2 1709 aa16.4■□□□□ 0.22
LETM1-203ENST00000505551 ZNF710Q8N1W2 664 aa16.39■□□□□ 0.22
LETM1-203ENST00000505551 TMEM51Q9NW97 253 aa16.39■□□□□ 0.22
LETM1-203ENST00000505551 ERVK-7P63135 1459 aa16.39■□□□□ 0.21
LETM1-203ENST00000505551 ADGRB3O60242 1522 aa16.39■□□□□ 0.21
LETM1-203ENST00000505551 ZNF592Q92610 1267 aa16.39■□□□□ 0.21
LETM1-203ENST00000505551 FAM43BQ6ZT52 329 aaPredicted RBP16.39■□□□□ 0.21
LETM1-203ENST00000505551 KIF2CQ99661 725 aa16.39■□□□□ 0.21
LETM1-203ENST00000505551 TICAM2Q86XR7 235 aa16.38■□□□□ 0.21
LETM1-203ENST00000505551 SLC52A1Q9NWF4 448 aa16.38■□□□□ 0.21
LETM1-203ENST00000505551 RPGRIP1LQ68CZ1 1315 aa16.38■□□□□ 0.21
LETM1-203ENST00000505551 K7ELQ4 463 aaPredicted RBP16.37■□□□□ 0.21
LETM1-203ENST00000505551 GTF2F1P35269 517 aaKnown RBP eCLIP16.37■□□□□ 0.21
LETM1-203ENST00000505551 RGS22Q8NE09 1264 aa16.37■□□□□ 0.21
LETM1-203ENST00000505551 MINK1Q8N4C8 1332 aaPredicted RBP16.37■□□□□ 0.21
LETM1-203ENST00000505551 CAMSAP1Q5T5Y3 1602 aa16.37■□□□□ 0.21
LETM1-203ENST00000505551 CD2BP2O95400 341 aaKnown RBP16.36■□□□□ 0.21
LETM1-203ENST00000505551 MVPQ14764 893 aaKnown RBP16.36■□□□□ 0.21
LETM1-203ENST00000505551 CAVIN1Q6NZI2 390 aaKnown RBP16.36■□□□□ 0.21
LETM1-203ENST00000505551 DIP2BQ9P265 1576 aa16.36■□□□□ 0.21
LETM1-203ENST00000505551 CBX1P83916 185 aa16.35■□□□□ 0.21
LETM1-203ENST00000505551 HDAC1Q13547 482 aaPredicted RBP16.35■□□□□ 0.21
LETM1-203ENST00000505551 TAF3Q5VWG9 929 aa16.35■□□□□ 0.21
LETM1-203ENST00000505551 PRIMPOLQ96LW4 560 aa16.35■□□□□ 0.21
LETM1-203ENST00000505551 PRIM1P49642 420 aaKnown RBP16.35■□□□□ 0.21
LETM1-203ENST00000505551 ESF1Q9H501 851 aaKnown RBP16.35■□□□□ 0.21
LETM1-203ENST00000505551 MYOM1P52179 1685 aa16.34■□□□□ 0.21
LETM1-203ENST00000505551 SRPK2P78362 688 aaKnown RBP16.34■□□□□ 0.21
LETM1-203ENST00000505551 NRXN1Q9ULB1 1477 aa16.34■□□□□ 0.21
LETM1-203ENST00000505551 ATP2B3Q16720 1220 aa16.34■□□□□ 0.21
LETM1-203ENST00000505551 LMBRD1Q9NUN5 540 aa16.34■□□□□ 0.21
LETM1-203ENST00000505551 GAS2L2Q8NHY3 880 aa16.33■□□□□ 0.21
LETM1-203ENST00000505551 FOXD4L1Q9NU39 408 aa16.33■□□□□ 0.21
LETM1-203ENST00000505551 PRAM1Q96QH2 718 aa16.33■□□□□ 0.2
LETM1-203ENST00000505551 AK9Q5TCS8 1911 aa16.33■□□□□ 0.2
LETM1-203ENST00000505551 PATL2C9JE40 543 aaKnown RBP16.32■□□□□ 0.2
LETM1-203ENST00000505551 HMGN5P82970 282 aaKnown RBP16.32■□□□□ 0.2
LETM1-203ENST00000505551 KIAA2012Q0VF49 1180 aa16.32■□□□□ 0.2
LETM1-203ENST00000505551 MORC1Q86VD1 984 aa16.32■□□□□ 0.2
LETM1-203ENST00000505551 GLI2P10070 1586 aa16.31■□□□□ 0.2
LETM1-203ENST00000505551 ZBTB22O15209 634 aa16.31■□□□□ 0.2
LETM1-203ENST00000505551 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
LETM1-203ENST00000505551 IFT172Q9UG01 1749 aa16.3■□□□□ 0.2
LETM1-203ENST00000505551 NSD3Q9BZ95 1437 aa16.3■□□□□ 0.2
LETM1-203ENST00000505551 CYP2E1P05181 493 aaPredicted RBP16.3■□□□□ 0.2
LETM1-203ENST00000505551 MCTP1Q6DN14 999 aa16.3■□□□□ 0.2
LETM1-203ENST00000505551 WAPLQ7Z5K2 1190 aa16.3■□□□□ 0.2
LETM1-203ENST00000505551 JARID2Q92833 1246 aaPredicted RBP16.3■□□□□ 0.2
LETM1-203ENST00000505551 NEUROD2Q15784 382 aa16.3■□□□□ 0.2
LETM1-203ENST00000505551 LRSAM1Q6UWE0 723 aa16.3■□□□□ 0.2
LETM1-203ENST00000505551 IQSEC2Q5JU85 1478 aa16.3■□□□□ 0.2
LETM1-203ENST00000505551 PHF23Q9BUL5 403 aaPredicted RBP16.29■□□□□ 0.2
LETM1-203ENST00000505551 PPLO60437 1756 aa16.29■□□□□ 0.2
LETM1-203ENST00000505551 EVC2Q86UK5 1308 aa16.29■□□□□ 0.2
LETM1-203ENST00000505551 TSC1Q92574 1164 aa16.29■□□□□ 0.2
LETM1-203ENST00000505551 BCL2L13Q9BXK5 485 aa16.29■□□□□ 0.2
LETM1-203ENST00000505551 ADGRB1O14514 1584 aa16.28■□□□□ 0.2
LETM1-203ENST00000505551 FAM193AP78312 1265 aa16.28■□□□□ 0.2
LETM1-203ENST00000505551 KIAA1210Q9ULL0 1709 aa16.28■□□□□ 0.2
LETM1-203ENST00000505551 ZBTB7CA1YPR0 619 aa16.28■□□□□ 0.2
LETM1-203ENST00000505551 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.28■□□□□ 0.2
LETM1-203ENST00000505551 KDM5AP29375 1690 aaKnown RBP16.28■□□□□ 0.2
LETM1-203ENST00000505551 NEURL4Q96JN8 1562 aa16.28■□□□□ 0.2
LETM1-203ENST00000505551 NEXMIFQ5QGS0 1516 aa16.27■□□□□ 0.2
LETM1-203ENST00000505551 NUCB2P80303 420 aa16.27■□□□□ 0.2
LETM1-203ENST00000505551 CEBPAP49715 358 aaPredicted RBP16.27■□□□□ 0.19
LETM1-203ENST00000505551 GPT2Q8TD30 523 aa16.26■□□□□ 0.19
LETM1-203ENST00000505551 PIK3C2BO00750 1634 aa16.26■□□□□ 0.19
LETM1-203ENST00000505551 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
LETM1-203ENST00000505551 SHPRHQ149N8 1683 aa16.26■□□□□ 0.19
LETM1-203ENST00000505551 ZKSCAN2Q63HK3 967 aa16.26■□□□□ 0.19
LETM1-203ENST00000505551 WDR63Q8IWG1 891 aa16.26■□□□□ 0.19
LETM1-203ENST00000505551 DZIP1LQ8IYY4 767 aaKnown RBP16.26■□□□□ 0.19
LETM1-203ENST00000505551 POLR3AO14802 1390 aaPredicted RBP16.26■□□□□ 0.19
LETM1-203ENST00000505551 RRP7AQ9Y3A4 280 aaKnown RBP16.25■□□□□ 0.19
LETM1-203ENST00000505551 MYO5BQ9ULV0 1848 aa16.25■□□□□ 0.19
LETM1-203ENST00000505551 BMP2KLQ5H9B9 411 aa16.25■□□□□ 0.19
LETM1-203ENST00000505551 PIBF1Q8WXW3 757 aa16.25■□□□□ 0.19
LETM1-203ENST00000505551 RBM42Q9BTD8 480 aaKnown RBP16.25■□□□□ 0.19
LETM1-203ENST00000505551 GGNBP2Q9H3C7 697 aa16.25■□□□□ 0.19
LETM1-203ENST00000505551 RBM27Q9P2N5 1060 aaKnown RBP16.25■□□□□ 0.19
LETM1-203ENST00000505551 KIF3AQ9Y496 699 aa16.25■□□□□ 0.19
LETM1-203ENST00000505551 MTHFSP49914 203 aa16.24■□□□□ 0.19
LETM1-203ENST00000505551 NUCB1Q02818 461 aa16.24■□□□□ 0.19
LETM1-203ENST00000505551 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
LETM1-203ENST00000505551 DNTTIP2Q5QJE6 756 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms