RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 FKBP4Q02790 459 aaKnown RBP eCLIP5.15□□□□□ -1.59
HMGB1P22-201ENST00000505315 MTMR3Q13615 1198 aa5.15□□□□□ -1.59
HMGB1P22-201ENST00000505315 C1orf216Q8TAB5 229 aa5.15□□□□□ -1.59
HMGB1P22-201ENST00000505315 ZNF592Q92610 1267 aa5.15□□□□□ -1.59
HMGB1P22-201ENST00000505315 CXXC1Q9P0U4 656 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P22-201ENST00000505315 VTI1BQ9UEU0 232 aa5.15□□□□□ -1.59
HMGB1P22-201ENST00000505315 FKBPLQ9UIM3 349 aa5.15□□□□□ -1.59
HMGB1P22-201ENST00000505315 ATMINO43313 823 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 NUDT7P0C024 238 aa5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 IBSPP21815 317 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 DNAJA1P31689 397 aaKnown RBP5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 SEC13P55735 322 aa5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 FUT2Q10981 343 aa5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 AAMPQ13685 434 aa5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 CCDC144BQ3MJ40 725 aa5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 RNF34Q969K3 372 aa5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 FAM161BQ96MY7 647 aa5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 PSMD1Q99460 953 aa5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 ZSWIM4Q9H7M6 989 aa5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 CEP126Q9P2H0 1117 aa5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 SEPT3Q9UH03 358 aa5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 ZC3H4Q9UPT8 1303 aaKnown RBP5.14□□□□□ -1.59
HMGB1P22-201ENST00000505315 hCG_2014768A0A024R1R8 64 aa5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 TLDC2A0PJX2 215 aa5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 TRIM6-TRIM34B2RNG4 842 aa5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 PPP1R3GB7ZBB8 358 aa5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 RNF40O75150 1001 aa5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 CLSTN1O94985 981 aa5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 P4HBP07237 508 aaKnown RBP5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 SLC10A3P09131 477 aa5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 CTHP32929 405 aa5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 MAPK8P45983 427 aa5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 IGBP1P78318 339 aa5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 COL19A1Q14993 1142 aa5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 SWT1Q5T5J6 900 aaKnown RBP5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 RGL4Q8IZJ4 473 aa5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 MICAL1Q8TDZ2 1067 aa5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 CUEDC1Q9NWM3 386 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 DNMT3AQ9Y6K1 912 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P22-201ENST00000505315 PTPREP23469 700 aa5.12□□□□□ -1.59
HMGB1P22-201ENST00000505315 CLDN10P78369 228 aa5.12□□□□□ -1.59
HMGB1P22-201ENST00000505315 PSMD2Q13200 908 aa5.12□□□□□ -1.59
HMGB1P22-201ENST00000505315 SF3B2Q13435 895 aaKnown RBP5.12□□□□□ -1.59
HMGB1P22-201ENST00000505315 MAP7D1Q3KQU3 841 aa5.12□□□□□ -1.59
HMGB1P22-201ENST00000505315 OXLD1Q5BKU9 147 aa5.12□□□□□ -1.59
HMGB1P22-201ENST00000505315 PPP4R3BQ5MIZ7 849 aa5.12□□□□□ -1.59
HMGB1P22-201ENST00000505315 TAS1R3Q7RTX0 852 aa5.12□□□□□ -1.59
HMGB1P22-201ENST00000505315 RETREG3Q86VR2 466 aa5.12□□□□□ -1.59
HMGB1P22-201ENST00000505315 LARGE2Q8N3Y3 721 aa5.12□□□□□ -1.59
HMGB1P22-201ENST00000505315 TPCN2Q8NHX9 752 aa5.12□□□□□ -1.59
HMGB1P22-201ENST00000505315 SBNO2Q9Y2G9 1366 aa5.12□□□□□ -1.59
HMGB1P22-201ENST00000505315 C19orf67A6NJJ6 358 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 SFI1A8K8P3 1242 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 NDUFB5O43674 189 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 RAB11FIP3O75154 756 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 LDHBP07195 334 aaKnown RBP5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 CFHP08603 1231 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 ZNF76P36508 570 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 ATP6V1AP38606 617 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 ANAPC15P60006 121 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 GTF2IP78347 998 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 FGD1P98174 961 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 PTK2Q05397 1052 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 RAD51AP2Q09MP3 1159 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 MRPL58Q14197 206 aaKnown RBP5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 NAA30Q147X3 362 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 CCDC102BQ68D86 513 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 SDE2Q6IQ49 451 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 ACBD3Q9H3P7 528 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 PARP2Q9UGN5 583 aa5.11□□□□□ -1.59
HMGB1P22-201ENST00000505315 SORBS3O60504 671 aa5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 MCCD1P59942 119 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 ATP2B2Q01814 1243 aa5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 PLCB3Q01970 1234 aa5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 PDE3BQ13370 1112 aa5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 LYPD8Q6UX82 237 aa5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 TMC7Q7Z402 723 aa5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 KHSRPQ92945 711 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 DUSP9Q99956 384 aaKnown RBP5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 TINF2Q9BSI4 451 aa5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 TGIF2Q9GZN2 237 aa5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 NLRP2Q9NX02 1062 aa5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 DOLKQ9UPQ8 538 aa5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 COLQQ9Y215 455 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 INPP5FQ9Y2H2 1132 aa5.1□□□□□ -1.59
HMGB1P22-201ENST00000505315 KDM4FA0A1W2PPD8 638 aa5.09□□□□□ -1.59
HMGB1P22-201ENST00000505315 FAM13AO94988 1023 aa5.09□□□□□ -1.59
HMGB1P22-201ENST00000505315 TNNI2P48788 182 aa5.09□□□□□ -1.59
HMGB1P22-201ENST00000505315 ARHGAP4P98171 946 aa5.09□□□□□ -1.59
HMGB1P22-201ENST00000505315 OCLNQ16625 522 aa5.09□□□□□ -1.59
HMGB1P22-201ENST00000505315 PROX2Q3B8N5 592 aa5.09□□□□□ -1.59
HMGB1P22-201ENST00000505315 Q3C1V9 767 aa5.09□□□□□ -1.59
HMGB1P22-201ENST00000505315 ARSIQ5FYB1 569 aa5.09□□□□□ -1.59
HMGB1P22-201ENST00000505315 ASTLQ6HA08 431 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P22-201ENST00000505315 VTI1AQ96AJ9 217 aa5.09□□□□□ -1.59
HMGB1P22-201ENST00000505315 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P22-201ENST00000505315 PTCD1O75127 700 aaKnown RBP5.08□□□□□ -1.6
HMGB1P22-201ENST00000505315 ARID5AQ03989 594 aa5.08□□□□□ -1.6
HMGB1P22-201ENST00000505315 BMS1Q14692 1282 aaKnown RBP5.08□□□□□ -1.6
HMGB1P22-201ENST00000505315 PTPROQ16827 1216 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms