RNA–Protein interactions for RNA: ENST00000504956.5

AFF1-205, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-205ENST00000504956 PARD3Q8TEW0 1356 aa21.51■■□□□ 1.03
AFF1-205ENST00000504956 PPM1GO15355 546 aaPredicted RBP21.51■■□□□ 1.03
AFF1-205ENST00000504956 AMPHP49418 695 aa21.51■■□□□ 1.03
AFF1-205ENST00000504956 AXIN2Q9Y2T1 843 aa21.51■■□□□ 1.03
AFF1-205ENST00000504956 COL5A2P05997 1499 aaPredicted RBP21.51■■□□□ 1.03
AFF1-205ENST00000504956 BCL9LQ86UU0 1499 aa21.51■■□□□ 1.03
AFF1-205ENST00000504956 RTL1A6NKG5 1358 aa21.51■■□□□ 1.03
AFF1-205ENST00000504956 FNBP4Q8N3X1 1017 aaPredicted RBP21.5■■□□□ 1.03
AFF1-205ENST00000504956 PHF23Q9BUL5 403 aaPredicted RBP21.5■■□□□ 1.03
AFF1-205ENST00000504956 POLKQ9UBT6 870 aa21.5■■□□□ 1.03
AFF1-205ENST00000504956 USP21Q9UK80 565 aa21.5■■□□□ 1.03
AFF1-205ENST00000504956 SMG6Q86US8 1419 aaKnown RBP21.5■■□□□ 1.03
AFF1-205ENST00000504956 HOXC9P31274 260 aa21.49■■□□□ 1.03
AFF1-205ENST00000504956 FLT4P35916 1363 aa21.49■■□□□ 1.03
AFF1-205ENST00000504956 IP6K1Q92551 441 aa21.48■■□□□ 1.03
AFF1-205ENST00000504956 STRN4Q9NRL3 753 aa21.48■■□□□ 1.03
AFF1-205ENST00000504956 BLMP54132 1417 aaPredicted RBP21.47■■□□□ 1.03
AFF1-205ENST00000504956 FAM208AQ9UK61 1670 aaKnown RBP21.47■■□□□ 1.03
AFF1-205ENST00000504956 UNC5CLQ8IV45 518 aa21.47■■□□□ 1.03
AFF1-205ENST00000504956 CDK12Q9NYV4 1490 aaPredicted RBP21.46■■□□□ 1.03
AFF1-205ENST00000504956 KIF24Q5T7B8 1368 aa21.46■■□□□ 1.03
AFF1-205ENST00000504956 PPP2R1AP30153 589 aa21.45■■□□□ 1.02
AFF1-205ENST00000504956 HSP90AB2PQ58FF8 381 aa21.45■■□□□ 1.02
AFF1-205ENST00000504956 RGS17Q9UGC6 210 aaPredicted RBP21.45■■□□□ 1.02
AFF1-205ENST00000504956 MTHFSP49914 203 aa21.44■■□□□ 1.02
AFF1-205ENST00000504956 EVA1CP58658 441 aa21.44■■□□□ 1.02
AFF1-205ENST00000504956 RALBP1Q15311 655 aa21.44■■□□□ 1.02
AFF1-205ENST00000504956 LTV1Q96GA3 475 aaPredicted RBP21.44■■□□□ 1.02
AFF1-205ENST00000504956 PRKRIP1Q9H875 184 aaPredicted RBP21.44■■□□□ 1.02
AFF1-205ENST00000504956 ANKRD24Q8TF21 1146 aa21.44■■□□□ 1.02
AFF1-205ENST00000504956 INSRP06213 1382 aa21.43■■□□□ 1.02
AFF1-205ENST00000504956 ZNF772Q68DY9 489 aaPredicted RBP21.43■■□□□ 1.02
AFF1-205ENST00000504956 ATRNO75882 1429 aa21.43■■□□□ 1.02
AFF1-205ENST00000504956 WNK3Q9BYP7 1800 aa21.43■■□□□ 1.02
AFF1-205ENST00000504956 ERBB3P21860 1342 aa21.42■■□□□ 1.02
AFF1-205ENST00000504956 LARP1Q6PKG0 1096 aaKnown RBP21.42■■□□□ 1.02
AFF1-205ENST00000504956 GLI3P10071 1580 aa21.41■■□□□ 1.02
AFF1-205ENST00000504956 CSB-PGBD3P0DP91 1061 aa21.41■■□□□ 1.02
AFF1-205ENST00000504956 CCDC9Q9Y3X0 531 aaKnown RBP21.41■■□□□ 1.02
AFF1-205ENST00000504956 WDR17Q8IZU2 1322 aa21.4■■□□□ 1.02
AFF1-205ENST00000504956 QTRT2Q9H974 415 aaKnown RBP21.4■■□□□ 1.02
AFF1-205ENST00000504956 TRPC5Q9UL62 973 aaPredicted RBP21.4■■□□□ 1.02
AFF1-205ENST00000504956 CRB1P82279 1406 aa21.39■■□□□ 1.02
AFF1-205ENST00000504956 ANP32CO43423 234 aa21.39■■□□□ 1.01
AFF1-205ENST00000504956 VPS72Q15906 364 aa21.39■■□□□ 1.01
AFF1-205ENST00000504956 MYBBP1AQ9BQG0 1328 aaKnown RBP21.39■■□□□ 1.01
AFF1-205ENST00000504956 COL3A1P02461 1466 aaPredicted RBP21.38■■□□□ 1.01
AFF1-205ENST00000504956 TOM1L2Q6ZVM7 507 aa21.38■■□□□ 1.01
AFF1-205ENST00000504956 POTEAQ6S8J7 498 aa21.37■■□□□ 1.01
AFF1-205ENST00000504956 USP35Q9P2H5 1018 aa21.37■■□□□ 1.01
AFF1-205ENST00000504956 RGPD1P0DJD0 1748 aa21.37■■□□□ 1.01
AFF1-205ENST00000504956 EIF4A2Q14240 407 aaKnown RBP21.36■■□□□ 1.01
AFF1-205ENST00000504956 NLRP2Q9NX02 1062 aa21.36■■□□□ 1.01
AFF1-205ENST00000504956 SPATA31A5Q5VU36 1347 aa21.36■■□□□ 1.01
AFF1-205ENST00000504956 SPATA31A7Q8IWB4 1347 aa21.36■■□□□ 1.01
AFF1-205ENST00000504956 DIEXFQ68CQ4 756 aaKnown RBP21.35■■□□□ 1.01
AFF1-205ENST00000504956 SPATA31A1Q5TZJ5 1347 aa21.34■■□□□ 1.01
AFF1-205ENST00000504956 GJD4Q96KN9 370 aaPredicted RBP21.34■■□□□ 1.01
AFF1-205ENST00000504956 USHBP1Q8N6Y0 703 aa21.33■■□□□ 1
AFF1-205ENST00000504956 NBPF6Q5VWK0 638 aa21.32■■□□□ 1
AFF1-205ENST00000504956 NBPF4Q96M43 638 aa21.32■■□□□ 1
AFF1-205ENST00000504956 CFAP53Q96M91 514 aa21.32■■□□□ 1
AFF1-205ENST00000504956 CARD10Q9BWT7 1032 aa21.32■■□□□ 1
AFF1-205ENST00000504956 BRWD3Q6RI45 1802 aa21.31■■□□□ 1
AFF1-205ENST00000504956 DIAPH1O60610 1272 aaKnown RBP21.31■■□□□ 1
AFF1-205ENST00000504956 IL13P35225 146 aa21.31■■□□□ 1
AFF1-205ENST00000504956 RBM6P78332 1123 aaKnown RBP21.31■■□□□ 1
AFF1-205ENST00000504956 THSD7AQ9UPZ6 1657 aa21.31■■□□□ 1
AFF1-205ENST00000504956 PARP4Q9UKK3 1724 aaKnown RBP21.3■■□□□ 1
AFF1-205ENST00000504956 RXRBP28702 533 aa21.29■■□□□ 1
AFF1-205ENST00000504956 FAM98CQ17RN3 349 aaKnown RBP21.29■■□□□ 1
AFF1-205ENST00000504956 TCP11L2Q8N4U5 519 aa21.29■■□□□ 1
AFF1-205ENST00000504956 EYA1Q99502 592 aa21.29■■□□□ 1
AFF1-205ENST00000504956 LRRC37A3O60309 1634 aa21.28■■□□□ 1
AFF1-205ENST00000504956 IGSF1Q8N6C5 1336 aa21.27■■□□□ 1
AFF1-205ENST00000504956 NCAPD2Q15021 1401 aa21.27■■□□□ 1
AFF1-205ENST00000504956 THRAP3Q9Y2W1 955 aaKnown RBP21.26■□□□□ 0.99
AFF1-205ENST00000504956 RGS12O14924 1447 aa21.26■□□□□ 0.99
AFF1-205ENST00000504956 A0A0G2JS52 829 aa21.25■□□□□ 0.99
AFF1-205ENST00000504956 U2SURPO15042 1029 aaKnown RBP21.25■□□□□ 0.99
AFF1-205ENST00000504956 MYT1Q01538 1121 aa21.25■□□□□ 0.99
AFF1-205ENST00000504956 MEGF6O75095 1541 aa21.25■□□□□ 0.99
AFF1-205ENST00000504956 DISP2A7MBM2 1401 aa21.25■□□□□ 0.99
AFF1-205ENST00000504956 BARGINQ6ZT62 677 aa21.24■□□□□ 0.99
AFF1-205ENST00000504956 SHANK3Q9BYB0 1731 aa21.24■□□□□ 0.99
AFF1-205ENST00000504956 CCDC184Q52MB2 194 aa21.24■□□□□ 0.99
AFF1-205ENST00000504956 AEBP1Q8IUX7 1158 aa21.24■□□□□ 0.99
AFF1-205ENST00000504956 HMOX1P09601 288 aa21.22■□□□□ 0.99
AFF1-205ENST00000504956 SULT6B1Q6IMI4 303 aa21.22■□□□□ 0.99
AFF1-205ENST00000504956 PKD1L3Q7Z443 1732 aa21.22■□□□□ 0.99
AFF1-205ENST00000504956 IL2RBP14784 551 aa21.21■□□□□ 0.99
AFF1-205ENST00000504956 NUDCQ9Y266 331 aa21.21■□□□□ 0.99
AFF1-205ENST00000504956 SEPT12Q8IYM1 358 aa21.21■□□□□ 0.99
AFF1-205ENST00000504956 KDRP35968 1356 aa21.2■□□□□ 0.98
AFF1-205ENST00000504956 ONECUT3O60422 494 aaPredicted RBP21.19■□□□□ 0.98
AFF1-205ENST00000504956 RAPGEF4Q8WZA2 1011 aa21.19■□□□□ 0.98
AFF1-205ENST00000504956 OVOS2A0A0G2JMS6 1433 aa21.19■□□□□ 0.98
AFF1-205ENST00000504956 U2AF1L5P0DN76 240 aaPredicted RBP21.18■□□□□ 0.98
AFF1-205ENST00000504956 U2AF1Q01081 240 aaKnown RBP eCLIP21.18■□□□□ 0.98
AFF1-205ENST00000504956 MRS2Q9HD23 443 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms