RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 PEX19P40855 299 aa12.19□□□□□ -0.46
ITGA1-203ENST00000504669 CHGAP10645 457 aaKnown RBP12.19□□□□□ -0.46
ITGA1-203ENST00000504669 NBPF6Q5VWK0 638 aa12.19□□□□□ -0.46
ITGA1-203ENST00000504669 NBPF5PQ86XG9 351 aaPredicted RBP12.19□□□□□ -0.46
ITGA1-203ENST00000504669 NBPF4Q96M43 638 aa12.19□□□□□ -0.46
ITGA1-203ENST00000504669 ANO2Q9NQ90 1003 aa12.19□□□□□ -0.46
ITGA1-203ENST00000504669 CWC22Q9HCG8 908 aaKnown RBP12.19□□□□□ -0.46
ITGA1-203ENST00000504669 CEP162Q5TB80 1403 aa12.18□□□□□ -0.46
ITGA1-203ENST00000504669 CLIP1P30622 1438 aa12.18□□□□□ -0.46
ITGA1-203ENST00000504669 USP6NLQ92738 828 aa12.18□□□□□ -0.46
ITGA1-203ENST00000504669 TNMDQ9H2S6 317 aa12.18□□□□□ -0.46
ITGA1-203ENST00000504669 ZSCAN12O43309 604 aa12.18□□□□□ -0.46
ITGA1-203ENST00000504669 CCDC27Q2M243 656 aa12.18□□□□□ -0.46
ITGA1-203ENST00000504669 LUC7L2Q9Y383 392 aaKnown RBP12.18□□□□□ -0.46
ITGA1-203ENST00000504669 PHLDB1Q86UU1 1377 aa12.18□□□□□ -0.46
ITGA1-203ENST00000504669 PPFIBP1Q86W92 1011 aa12.18□□□□□ -0.46
ITGA1-203ENST00000504669 NINLQ9Y2I6 1382 aa12.17□□□□□ -0.46
ITGA1-203ENST00000504669 CCDC196A0A1B0GTZ2 297 aa12.17□□□□□ -0.46
ITGA1-203ENST00000504669 STAC3Q96MF2 364 aa12.17□□□□□ -0.46
ITGA1-203ENST00000504669 NOLC1Q14978 699 aaKnown RBP eCLIP12.17□□□□□ -0.46
ITGA1-203ENST00000504669 VCXQ9H320 206 aa12.17□□□□□ -0.46
ITGA1-203ENST00000504669 PPP1R12BO60237 982 aaPredicted RBP12.16□□□□□ -0.46
ITGA1-203ENST00000504669 CEP104O60308 925 aa12.16□□□□□ -0.46
ITGA1-203ENST00000504669 U2AF2P26368 475 aaKnown RBP eCLIP12.16□□□□□ -0.463e-6■■□□□ 13.9
ITGA1-203ENST00000504669 RILPL2Q969X0 211 aa12.16□□□□□ -0.46
ITGA1-203ENST00000504669 WWC2Q6AWC2 1192 aa12.16□□□□□ -0.46
ITGA1-203ENST00000504669 RAI14Q9P0K7 980 aa12.16□□□□□ -0.46
ITGA1-203ENST00000504669 SATB2Q9UPW6 733 aa12.16□□□□□ -0.46
ITGA1-203ENST00000504669 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.16□□□□□ -0.46
ITGA1-203ENST00000504669 MXRA7P84157 204 aa12.16□□□□□ -0.46
ITGA1-203ENST00000504669 CCDC38Q502W7 563 aa12.16□□□□□ -0.46
ITGA1-203ENST00000504669 CIZ1Q9ULV3 898 aaPredicted RBP12.16□□□□□ -0.46
ITGA1-203ENST00000504669 SSBP05455 408 aaKnown RBP eCLIP12.16□□□□□ -0.46
ITGA1-203ENST00000504669 INTS3Q68E01 1043 aaKnown RBP12.16□□□□□ -0.46
ITGA1-203ENST00000504669 CCDC174Q6PII3 467 aa12.16□□□□□ -0.46
ITGA1-203ENST00000504669 NUTM1Q86Y26 1132 aa12.16□□□□□ -0.46
ITGA1-203ENST00000504669 TSPYL2Q9H2G4 693 aaPredicted RBP12.16□□□□□ -0.46
ITGA1-203ENST00000504669 GCOM1H8Y6P7 765 aaPredicted RBP12.16□□□□□ -0.46
ITGA1-203ENST00000504669 HSF2BPO75031 334 aa12.16□□□□□ -0.46
ITGA1-203ENST00000504669 MYZAPP0CAP1 466 aa12.16□□□□□ -0.46
ITGA1-203ENST00000504669 TERF1P54274 439 aa12.15□□□□□ -0.46
ITGA1-203ENST00000504669 TPX2Q9ULW0 747 aaKnown RBP12.15□□□□□ -0.46
ITGA1-203ENST00000504669 XRCC6P12956 609 aaKnown RBP eCLIP12.15□□□□□ -0.46
ITGA1-203ENST00000504669 GBP1P32455 592 aa12.15□□□□□ -0.46
ITGA1-203ENST00000504669 FRMD3A2A2Y4 597 aa12.15□□□□□ -0.46
ITGA1-203ENST00000504669 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.46
ITGA1-203ENST00000504669 MORC4Q8TE76 937 aa12.15□□□□□ -0.46
ITGA1-203ENST00000504669 STAMBPO95630 424 aa12.15□□□□□ -0.46
ITGA1-203ENST00000504669 ZNF513Q8N8E2 541 aaPredicted RBP12.15□□□□□ -0.46
ITGA1-203ENST00000504669 PCK1P35558 622 aa12.15□□□□□ -0.46
ITGA1-203ENST00000504669 MAP7D1Q3KQU3 841 aa12.15□□□□□ -0.46
ITGA1-203ENST00000504669 CCDC171Q6TFL3 1326 aa12.15□□□□□ -0.47
ITGA1-203ENST00000504669 INPP5BP32019 993 aa12.14□□□□□ -0.47
ITGA1-203ENST00000504669 NSRP1Q9H0G5 558 aaKnown RBP12.14□□□□□ -0.47
ITGA1-203ENST00000504669 CCDC113Q9H0I3 377 aa12.14□□□□□ -0.47
ITGA1-203ENST00000504669 WASHC2AQ641Q2 1341 aa12.14□□□□□ -0.47
ITGA1-203ENST00000504669 CA8P35219 290 aa12.14□□□□□ -0.47
ITGA1-203ENST00000504669 CLUAP1Q96AJ1 413 aa12.14□□□□□ -0.47
ITGA1-203ENST00000504669 TACC1O75410 805 aa12.14□□□□□ -0.47
ITGA1-203ENST00000504669 RANBP1P43487 201 aa12.14□□□□□ -0.47
ITGA1-203ENST00000504669 MAP3K7CLP57077 242 aa12.14□□□□□ -0.47
ITGA1-203ENST00000504669 CTNNBL1Q8WYA6 563 aaPredicted RBP12.14□□□□□ -0.47
ITGA1-203ENST00000504669 GTF3C6Q969F1 213 aa12.14□□□□□ -0.47
ITGA1-203ENST00000504669 EIF3AQ14152 1382 aaKnown RBP12.14□□□□□ -0.47
ITGA1-203ENST00000504669 K7ELQ4 463 aaPredicted RBP12.14□□□□□ -0.47
ITGA1-203ENST00000504669 ATP11AP98196 1134 aa12.14□□□□□ -0.47
ITGA1-203ENST00000504669 WASHC2CQ9Y4E1 1318 aa12.14□□□□□ -0.47
ITGA1-203ENST00000504669 ROCK1Q13464 1354 aa12.14□□□□□ -0.47
ITGA1-203ENST00000504669 NEMFO60524 1076 aa12.13□□□□□ -0.47
ITGA1-203ENST00000504669 RFC1P35251 1148 aaPredicted RBP12.13□□□□□ -0.47
ITGA1-203ENST00000504669 SNW1Q13573 536 aaKnown RBP12.13□□□□□ -0.47
ITGA1-203ENST00000504669 ZKSCAN8Q15776 578 aaPredicted RBP12.13□□□□□ -0.47
ITGA1-203ENST00000504669 ANKS4BQ8N8V4 417 aa12.13□□□□□ -0.47
ITGA1-203ENST00000504669 KINO60870 393 aaKnown RBP12.13□□□□□ -0.47
ITGA1-203ENST00000504669 CLIP2Q9UDT6 1046 aa12.13□□□□□ -0.47
ITGA1-203ENST00000504669 KIF5CO60282 957 aa12.13□□□□□ -0.47
ITGA1-203ENST00000504669 CCDC65Q8IXS2 484 aa12.13□□□□□ -0.47
ITGA1-203ENST00000504669 VEZTQ9HBM0 779 aa12.13□□□□□ -0.47
ITGA1-203ENST00000504669 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.13□□□□□ -0.47
ITGA1-203ENST00000504669 CNKSR2Q8WXI2 1034 aa12.12□□□□□ -0.47
ITGA1-203ENST00000504669 ARFGAP3Q9NP61 516 aa12.12□□□□□ -0.47
ITGA1-203ENST00000504669 IFFO1Q0D2I5 559 aa12.12□□□□□ -0.47
ITGA1-203ENST00000504669 POLD1P28340 1107 aa12.12□□□□□ -0.47
ITGA1-203ENST00000504669 PSMC4P43686 418 aa12.12□□□□□ -0.47
ITGA1-203ENST00000504669 SUFUQ9UMX1 484 aa12.12□□□□□ -0.47
ITGA1-203ENST00000504669 LACTBP83111 547 aaPredicted RBP12.12□□□□□ -0.47
ITGA1-203ENST00000504669 B4GALNT4Q76KP1 1039 aa12.12□□□□□ -0.47
ITGA1-203ENST00000504669 ARMC9Q7Z3E5 817 aa12.12□□□□□ -0.47
ITGA1-203ENST00000504669 SDF4Q9BRK5 362 aa12.12□□□□□ -0.47
ITGA1-203ENST00000504669 TRMT1Q9NXH9 659 aaKnown RBP12.12□□□□□ -0.47
ITGA1-203ENST00000504669 PDCD7Q8N8D1 485 aaKnown RBP12.11□□□□□ -0.47
ITGA1-203ENST00000504669 ANKRD18BA2A2Z9 1011 aa12.11□□□□□ -0.47
ITGA1-203ENST00000504669 ADCY5O95622 1261 aa12.11□□□□□ -0.47
ITGA1-203ENST00000504669 TXLNAP40222 546 aa12.11□□□□□ -0.47
ITGA1-203ENST00000504669 FOSBP53539 338 aa12.11□□□□□ -0.47
ITGA1-203ENST00000504669 BRPF1P55201 1214 aaPredicted RBP12.11□□□□□ -0.47
ITGA1-203ENST00000504669 UIMC1Q96RL1 719 aa12.11□□□□□ -0.47
ITGA1-203ENST00000504669 ESF1Q9H501 851 aaKnown RBP12.11□□□□□ -0.47
ITGA1-203ENST00000504669 ZKSCAN5Q9Y2L8 839 aa12.11□□□□□ -0.47
ITGA1-203ENST00000504669 MIER3Q7Z3K6 550 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms