RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PAK3O75914 559 aaPredicted RBP13.91□□□□□ -0.18
TPM3-217ENST00000504663 WDR43Q15061 677 aaKnown RBP eCLIP13.9□□□□□ -0.18
TPM3-217ENST00000504663 CFAP53Q96M91 514 aa13.9□□□□□ -0.18
TPM3-217ENST00000504663 ZNF521Q96K83 1311 aa13.9□□□□□ -0.19
TPM3-217ENST00000504663 PHLPP1O60346 1717 aa13.89□□□□□ -0.19
TPM3-217ENST00000504663 NCAPD2Q15021 1401 aa13.89□□□□□ -0.19
TPM3-217ENST00000504663 ARHGEF10O15013 1369 aa13.88□□□□□ -0.19
TPM3-217ENST00000504663 SENP3-EIF4A1A0A087X0R7 540 aa13.88□□□□□ -0.19
TPM3-217ENST00000504663 DIAPH1O60610 1272 aaKnown RBP13.88□□□□□ -0.19
TPM3-217ENST00000504663 EIF4A2Q14240 407 aaKnown RBP13.88□□□□□ -0.19
TPM3-217ENST00000504663 HSP90AB2PQ58FF8 381 aa13.88□□□□□ -0.19
TPM3-217ENST00000504663 PLEKHF1Q96S99 279 aa13.88□□□□□ -0.19
TPM3-217ENST00000504663 FAM208AQ9UK61 1670 aaKnown RBP13.88□□□□□ -0.19
TPM3-217ENST00000504663 SOX12O15370 315 aa13.87□□□□□ -0.19
TPM3-217ENST00000504663 GCP02774 474 aa13.87□□□□□ -0.19
TPM3-217ENST00000504663 HOXC9P31274 260 aa13.87□□□□□ -0.19
TPM3-217ENST00000504663 ARHGEF25Q86VW2 580 aa13.87□□□□□ -0.19
TPM3-217ENST00000504663 CCDC146Q8IYE0 955 aa13.87□□□□□ -0.19
TPM3-217ENST00000504663 KDRP35968 1356 aa13.86□□□□□ -0.19
TPM3-217ENST00000504663 DLG5Q8TDM6 1919 aa13.86□□□□□ -0.19
TPM3-217ENST00000504663 RSPH6AQ9H0K4 717 aa13.86□□□□□ -0.19
TPM3-217ENST00000504663 CPDO75976 1380 aa13.85□□□□□ -0.19
TPM3-217ENST00000504663 PPM1GO15355 546 aaPredicted RBP13.85□□□□□ -0.19
TPM3-217ENST00000504663 KCNH5Q8NCM2 988 aa13.85□□□□□ -0.19
TPM3-217ENST00000504663 IGSF1Q8N6C5 1336 aa13.85□□□□□ -0.19
TPM3-217ENST00000504663 CENPBP07199 599 aaPredicted RBP13.84□□□□□ -0.19
TPM3-217ENST00000504663 U2AF1L5P0DN76 240 aaPredicted RBP13.83□□□□□ -0.2
TPM3-217ENST00000504663 U2AF1Q01081 240 aaKnown RBP eCLIP13.83□□□□□ -0.2
TPM3-217ENST00000504663 IP6K1Q92551 441 aa13.83□□□□□ -0.2
TPM3-217ENST00000504663 RUNDC1Q96C34 613 aa13.83□□□□□ -0.2
TPM3-217ENST00000504663 APAF1O14727 1248 aa13.82□□□□□ -0.2
TPM3-217ENST00000504663 AEBP1Q8IUX7 1158 aa13.82□□□□□ -0.2
TPM3-217ENST00000504663 CABLES1Q8TDN4 633 aa13.82□□□□□ -0.2
TPM3-217ENST00000504663 NUDCQ9Y266 331 aa13.82□□□□□ -0.2
TPM3-217ENST00000504663 U2SURPO15042 1029 aaKnown RBP13.81□□□□□ -0.2
TPM3-217ENST00000504663 LRRC37A3O60309 1634 aa13.8□□□□□ -0.2
TPM3-217ENST00000504663 AMPHP49418 695 aa13.8□□□□□ -0.2
TPM3-217ENST00000504663 LMOD2Q6P5Q4 547 aa13.8□□□□□ -0.2
TPM3-217ENST00000504663 AXIN2Q9Y2T1 843 aa13.8□□□□□ -0.2
TPM3-217ENST00000504663 KIAA0232Q92628 1395 aa13.8□□□□□ -0.2
TPM3-217ENST00000504663 NRAPQ86VF7 1730 aa13.79□□□□□ -0.2
TPM3-217ENST00000504663 FCHSD2O94868 740 aa13.79□□□□□ -0.2
TPM3-217ENST00000504663 HMOX1P09601 288 aa13.79□□□□□ -0.2
TPM3-217ENST00000504663 TCP11L2Q8N4U5 519 aa13.79□□□□□ -0.2
TPM3-217ENST00000504663 EYA1Q99502 592 aa13.79□□□□□ -0.2
TPM3-217ENST00000504663 COL14A1Q05707 1796 aaKnown RBP13.78□□□□□ -0.2
TPM3-217ENST00000504663 PRKAR2BP31323 418 aa13.78□□□□□ -0.2
TPM3-217ENST00000504663 CERKQ8TCT0 537 aa13.78□□□□□ -0.2
TPM3-217ENST00000504663 PHACTR3Q96KR7 559 aa13.78□□□□□ -0.2
TPM3-217ENST00000504663 PLCH1Q4KWH8 1693 aa13.78□□□□□ -0.2
TPM3-217ENST00000504663 ATXN8OSP0DMR3 200 aa13.77□□□□□ -0.21
TPM3-217ENST00000504663 ERBB3P21860 1342 aa13.77□□□□□ -0.21
TPM3-217ENST00000504663 PKD1L3Q7Z443 1732 aa13.76□□□□□ -0.21
TPM3-217ENST00000504663 COL5A2P05997 1499 aaPredicted RBP13.76□□□□□ -0.21
TPM3-217ENST00000504663 ZC3H6P61129 1189 aaKnown RBP13.76□□□□□ -0.21
TPM3-217ENST00000504663 CCDC27Q2M243 656 aa13.76□□□□□ -0.21
TPM3-217ENST00000504663 TRMT2AQ8IZ69 625 aaKnown RBP13.76□□□□□ -0.21
TPM3-217ENST00000504663 CDCA7LQ96GN5 454 aa13.76□□□□□ -0.21
TPM3-217ENST00000504663 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
TPM3-217ENST00000504663 TRIM35Q9UPQ4 493 aa13.76□□□□□ -0.21
TPM3-217ENST00000504663 RRP7AQ9Y3A4 280 aaKnown RBP13.76□□□□□ -0.21
TPM3-217ENST00000504663 SALL2Q9Y467 1007 aaPredicted RBP13.76□□□□□ -0.21
TPM3-217ENST00000504663 ADAMTS7Q9UKP4 1686 aa13.75□□□□□ -0.21
TPM3-217ENST00000504663 TOM1O60784 492 aa13.75□□□□□ -0.21
TPM3-217ENST00000504663 PLEKHG5O94827 1062 aa13.75□□□□□ -0.21
TPM3-217ENST00000504663 TMPOP42166 694 aaKnown RBP13.75□□□□□ -0.21
TPM3-217ENST00000504663 NBPF6Q5VWK0 638 aa13.75□□□□□ -0.21
TPM3-217ENST00000504663 SULT6B1Q6IMI4 303 aa13.75□□□□□ -0.21
TPM3-217ENST00000504663 NGEFQ8N5V2 710 aa13.75□□□□□ -0.21
TPM3-217ENST00000504663 NBPF4Q96M43 638 aa13.75□□□□□ -0.21
TPM3-217ENST00000504663 WNK3Q9BYP7 1800 aa13.75□□□□□ -0.21
TPM3-217ENST00000504663 SHANK3Q9BYB0 1731 aa13.75□□□□□ -0.21
TPM3-217ENST00000504663 UBAP1LF5GYI3 381 aa13.74□□□□□ -0.21
TPM3-217ENST00000504663 WWC1Q8IX03 1113 aa13.74□□□□□ -0.21
TPM3-217ENST00000504663 VIRMAQ69YN4 1812 aaKnown RBP13.74□□□□□ -0.21
TPM3-217ENST00000504663 PDE3BQ13370 1112 aa13.73□□□□□ -0.21
TPM3-217ENST00000504663 ANKRD24Q8TF21 1146 aa13.73□□□□□ -0.21
TPM3-217ENST00000504663 LRRC59Q96AG4 307 aaKnown RBP13.73□□□□□ -0.21
TPM3-217ENST00000504663 SLFN5Q08AF3 891 aa13.72□□□□□ -0.21
TPM3-217ENST00000504663 CHRNA2Q15822 529 aa13.72□□□□□ -0.21
TPM3-217ENST00000504663 NFE2L2Q16236 605 aa13.72□□□□□ -0.21
TPM3-217ENST00000504663 DUSP27Q5VZP5 1158 aa13.72□□□□□ -0.21
TPM3-217ENST00000504663 USHBP1Q8N6Y0 703 aa13.72□□□□□ -0.21
TPM3-217ENST00000504663 LTV1Q96GA3 475 aaPredicted RBP13.72□□□□□ -0.21
TPM3-217ENST00000504663 MEGF6O75095 1541 aa13.72□□□□□ -0.21
TPM3-217ENST00000504663 MAPK8IP3Q9UPT6 1336 aa13.71□□□□□ -0.21
TPM3-217ENST00000504663 PARP4Q9UKK3 1724 aaKnown RBP13.71□□□□□ -0.21
TPM3-217ENST00000504663 NWD2Q9ULI1 1742 aa13.71□□□□□ -0.21
TPM3-217ENST00000504663 ZBTB7CA1YPR0 619 aa13.71□□□□□ -0.21
TPM3-217ENST00000504663 PIP4K2BP78356 416 aa13.71□□□□□ -0.21
TPM3-217ENST00000504663 PLCB2Q00722 1185 aa13.7□□□□□ -0.22
TPM3-217ENST00000504663 RNF216Q9NWF9 866 aaPredicted RBP13.7□□□□□ -0.22
TPM3-217ENST00000504663 LRP6O75581 1613 aa13.7□□□□□ -0.22
TPM3-217ENST00000504663 SIPA1L3O60292 1781 aaPredicted RBP13.69□□□□□ -0.22
TPM3-217ENST00000504663 PNNQ9H307 717 aaKnown RBP13.69□□□□□ -0.22
TPM3-217ENST00000504663 PLEKHG2Q9H7P9 1386 aa13.69□□□□□ -0.22
TPM3-217ENST00000504663 FAM83GA6ND36 823 aa13.68□□□□□ -0.22
TPM3-217ENST00000504663 RIPK4P57078 832 aa13.68□□□□□ -0.22
TPM3-217ENST00000504663 GOLGA2Q08379 1002 aa13.68□□□□□ -0.22
TPM3-217ENST00000504663 NEUROD2Q15784 382 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms