RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 U2AF1Q01081 240 aaKnown RBP eCLIP17.35■□□□□ 0.37
COL6A4P2-202ENST00000504443 CFAP70Q5T0N1 1121 aa17.35■□□□□ 0.37
COL6A4P2-202ENST00000504443 PIBF1Q8WXW3 757 aa17.35■□□□□ 0.37
COL6A4P2-202ENST00000504443 USP25Q9UHP3 1055 aa17.35■□□□□ 0.37
COL6A4P2-202ENST00000504443 ATP10AO60312 1499 aa17.35■□□□□ 0.37
COL6A4P2-202ENST00000504443 NSD3Q9BZ95 1437 aa17.34■□□□□ 0.37
COL6A4P2-202ENST00000504443 SYCP2Q9BX26 1530 aa17.34■□□□□ 0.37
COL6A4P2-202ENST00000504443 GTF2F1P35269 517 aaKnown RBP eCLIP17.34■□□□□ 0.37
COL6A4P2-202ENST00000504443 IPO4Q8TEX9 1081 aaKnown RBP17.34■□□□□ 0.37
COL6A4P2-202ENST00000504443 TSPY26PQ9H489 355 aa17.34■□□□□ 0.37
COL6A4P2-202ENST00000504443 PLCB2Q00722 1185 aa17.33■□□□□ 0.36
COL6A4P2-202ENST00000504443 SLC12A5Q9H2X9 1139 aa17.33■□□□□ 0.36
COL6A4P2-202ENST00000504443 GDPD2Q9HCC8 539 aa17.32■□□□□ 0.36
COL6A4P2-202ENST00000504443 CFAP74Q9C0B2 1584 aa17.32■□□□□ 0.36
COL6A4P2-202ENST00000504443 RIOK3O14730 519 aaKnown RBP17.32■□□□□ 0.36
COL6A4P2-202ENST00000504443 PLCH2O75038 1416 aa17.31■□□□□ 0.36
COL6A4P2-202ENST00000504443 CDK11BP21127 795 aaKnown RBP17.3■□□□□ 0.36
COL6A4P2-202ENST00000504443 RABEP1Q15276 862 aa17.3■□□□□ 0.36
COL6A4P2-202ENST00000504443 KCNJ4P48050 445 aa17.3■□□□□ 0.36
COL6A4P2-202ENST00000504443 PPIP5K1Q6PFW1 1433 aa17.29■□□□□ 0.36
COL6A4P2-202ENST00000504443 TRAPPC8Q9Y2L5 1435 aa17.29■□□□□ 0.36
COL6A4P2-202ENST00000504443 GSPT1P15170 499 aaKnown RBP17.29■□□□□ 0.36
COL6A4P2-202ENST00000504443 RIMBP3CA6NJZ7 1639 aa17.29■□□□□ 0.36
COL6A4P2-202ENST00000504443 RIMBP3BA6NNM3 1639 aa17.29■□□□□ 0.36
COL6A4P2-202ENST00000504443 RIMBP3Q9UFD9 1639 aa17.29■□□□□ 0.36
COL6A4P2-202ENST00000504443 ZNF518AQ6AHZ1 1483 aa17.29■□□□□ 0.36
COL6A4P2-202ENST00000504443 NOS1P29475 1434 aa17.29■□□□□ 0.36
COL6A4P2-202ENST00000504443 CDC45O75419 566 aa17.28■□□□□ 0.36
COL6A4P2-202ENST00000504443 ADCY5O95622 1261 aa17.28■□□□□ 0.36
COL6A4P2-202ENST00000504443 TRIM35Q9UPQ4 493 aa17.28■□□□□ 0.36
COL6A4P2-202ENST00000504443 GADD45BO75293 160 aaPredicted RBP17.28■□□□□ 0.36
COL6A4P2-202ENST00000504443 FKBP5Q13451 457 aaPredicted RBP17.28■□□□□ 0.36
COL6A4P2-202ENST00000504443 CD109Q6YHK3 1445 aa17.27■□□□□ 0.36
COL6A4P2-202ENST00000504443 PREX2Q70Z35 1606 aa17.27■□□□□ 0.35
COL6A4P2-202ENST00000504443 RAPGEF3O95398 923 aa17.27■□□□□ 0.35
COL6A4P2-202ENST00000504443 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.35
COL6A4P2-202ENST00000504443 FAM69CQ0P6D2 419 aa17.27■□□□□ 0.35
COL6A4P2-202ENST00000504443 NOL8Q76FK4 1167 aaKnown RBP17.27■□□□□ 0.35
COL6A4P2-202ENST00000504443 SIRT2Q8IXJ6 389 aa17.27■□□□□ 0.35
COL6A4P2-202ENST00000504443 MAST1Q9Y2H9 1570 aa17.27■□□□□ 0.35
COL6A4P2-202ENST00000504443 SPHKAPQ2M3C7 1700 aa17.26■□□□□ 0.35
COL6A4P2-202ENST00000504443 RSPH4AQ5TD94 716 aa17.26■□□□□ 0.35
COL6A4P2-202ENST00000504443 SMARCA5O60264 1052 aaPredicted RBP17.26■□□□□ 0.35
COL6A4P2-202ENST00000504443 CT47B1P0C2W7 299 aaPredicted RBP17.26■□□□□ 0.35
COL6A4P2-202ENST00000504443 NAA30Q147X3 362 aaPredicted RBP17.26■□□□□ 0.35
COL6A4P2-202ENST00000504443 C16orf71Q8IYS4 520 aaPredicted RBP17.26■□□□□ 0.35
COL6A4P2-202ENST00000504443 DUOX2Q9NRD8 1548 aa17.26■□□□□ 0.35
COL6A4P2-202ENST00000504443 USP26Q9BXU7 913 aa17.25■□□□□ 0.35
COL6A4P2-202ENST00000504443 CHMP4AQ9BY43 222 aa17.25■□□□□ 0.35
COL6A4P2-202ENST00000504443 CWC22Q9HCG8 908 aaKnown RBP17.25■□□□□ 0.35
COL6A4P2-202ENST00000504443 PYCARDQ9ULZ3 195 aa17.25■□□□□ 0.35
COL6A4P2-202ENST00000504443 CFAP53Q96M91 514 aa17.25■□□□□ 0.35
COL6A4P2-202ENST00000504443 ADGRF5Q8IZF2 1346 aa17.25■□□□□ 0.35
COL6A4P2-202ENST00000504443 PAXIP1Q6ZW49 1069 aaPredicted RBP17.24■□□□□ 0.35
COL6A4P2-202ENST00000504443 PTPRTO14522 1441 aa17.24■□□□□ 0.35
COL6A4P2-202ENST00000504443 U2SURPO15042 1029 aaKnown RBP17.24■□□□□ 0.35
COL6A4P2-202ENST00000504443 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
COL6A4P2-202ENST00000504443 ANKRD7Q92527 254 aa17.24■□□□□ 0.35
COL6A4P2-202ENST00000504443 ZBTB7BO15156 539 aaPredicted RBP17.23■□□□□ 0.35
COL6A4P2-202ENST00000504443 FANCAO15360 1455 aa17.23■□□□□ 0.35
COL6A4P2-202ENST00000504443 MBD3O95983 291 aa17.23■□□□□ 0.35
COL6A4P2-202ENST00000504443 HCLS1P14317 486 aaPredicted RBP17.23■□□□□ 0.35
COL6A4P2-202ENST00000504443 SPC24Q8NBT2 197 aa17.23■□□□□ 0.35
COL6A4P2-202ENST00000504443 SPTLC3Q9NUV7 552 aa17.23■□□□□ 0.35
COL6A4P2-202ENST00000504443 SPAG9O60271 1321 aaKnown RBP17.23■□□□□ 0.35
COL6A4P2-202ENST00000504443 TAF3Q5VWG9 929 aa17.22■□□□□ 0.35
COL6A4P2-202ENST00000504443 GCC1Q96CN9 775 aa17.22■□□□□ 0.35
COL6A4P2-202ENST00000504443 TRERF1Q96PN7 1200 aa17.22■□□□□ 0.35
COL6A4P2-202ENST00000504443 ST18O60284 1047 aa17.22■□□□□ 0.35
COL6A4P2-202ENST00000504443 APBB1O00213 710 aa17.21■□□□□ 0.35
COL6A4P2-202ENST00000504443 IPO8O15397 1037 aaKnown RBP17.21■□□□□ 0.35
COL6A4P2-202ENST00000504443 OTUD7AQ8TE49 926 aaPredicted RBP17.21■□□□□ 0.35
COL6A4P2-202ENST00000504443 PLEKHF1Q96S99 279 aa17.21■□□□□ 0.35
COL6A4P2-202ENST00000504443 OGFRQ9NZT2 677 aa17.21■□□□□ 0.35
COL6A4P2-202ENST00000504443 CLTCL1P53675 1640 aa17.2■□□□□ 0.34
COL6A4P2-202ENST00000504443 ERICH4A6NGS2 130 aa17.2■□□□□ 0.34
COL6A4P2-202ENST00000504443 SLFN14P0C7P3 912 aa17.2■□□□□ 0.34
COL6A4P2-202ENST00000504443 CHAF1AQ13111 956 aaPredicted RBP17.2■□□□□ 0.34
COL6A4P2-202ENST00000504443 CERS3Q8IU89 383 aa17.2■□□□□ 0.34
COL6A4P2-202ENST00000504443 ADGRB2O60241 1585 aa17.2■□□□□ 0.34
COL6A4P2-202ENST00000504443 KCNF1Q9H3M0 494 aa17.2■□□□□ 0.34
COL6A4P2-202ENST00000504443 ATAD2Q6PL18 1390 aa17.2■□□□□ 0.34
COL6A4P2-202ENST00000504443 ABCC11Q96J66 1382 aa17.2■□□□□ 0.34
COL6A4P2-202ENST00000504443 NCBP1Q09161 790 aaKnown RBP17.19■□□□□ 0.34
COL6A4P2-202ENST00000504443 PLEKHM2Q8IWE5 1019 aa17.19■□□□□ 0.34
COL6A4P2-202ENST00000504443 DIAPH3Q9NSV4 1193 aa17.19■□□□□ 0.34
COL6A4P2-202ENST00000504443 TRAK1Q9UPV9 953 aa17.18■□□□□ 0.34
COL6A4P2-202ENST00000504443 AP5Z1O43299 807 aa17.18■□□□□ 0.34
COL6A4P2-202ENST00000504443 KIAA1524Q8TCG1 905 aa17.18■□□□□ 0.34
COL6A4P2-202ENST00000504443 USP48Q86UV5 1035 aa17.17■□□□□ 0.34
COL6A4P2-202ENST00000504443 ELL2O00472 640 aaPredicted RBP17.17■□□□□ 0.34
COL6A4P2-202ENST00000504443 NEK4P51957 841 aa17.17■□□□□ 0.34
COL6A4P2-202ENST00000504443 FEZ1Q99689 392 aa17.17■□□□□ 0.34
COL6A4P2-202ENST00000504443 CTNNA3Q9UI47 895 aa17.17■□□□□ 0.34
COL6A4P2-202ENST00000504443 TMX3Q96JJ7 454 aa17.17■□□□□ 0.34
COL6A4P2-202ENST00000504443 TAF7LQ5H9L4 462 aa17.16■□□□□ 0.34
COL6A4P2-202ENST00000504443 SYAP1Q96A49 352 aaPredicted RBP17.16■□□□□ 0.34
COL6A4P2-202ENST00000504443 TRPM2O94759 1503 aa17.16■□□□□ 0.34
COL6A4P2-202ENST00000504443 ADGRL1O94910 1474 aa17.16■□□□□ 0.34
COL6A4P2-202ENST00000504443 CTIFO43310 598 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms