RNA–Protein interactions for RNA: ENST00000504417.1

ITGA3-203, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-203ENST00000504417 TIMELESSQ9UNS1 1208 aa10.16□□□□□ -0.78
ITGA3-203ENST00000504417 NINLQ9Y2I6 1382 aa10.15□□□□□ -0.78
ITGA3-203ENST00000504417 TTC21AQ8NDW8 1320 aa10.15□□□□□ -0.78
ITGA3-203ENST00000504417 PAK3O75914 559 aaPredicted RBP10.15□□□□□ -0.78
ITGA3-203ENST00000504417 LMOD2Q6P5Q4 547 aa10.15□□□□□ -0.78
ITGA3-203ENST00000504417 MAP2P11137 1827 aaKnown RBP10.14□□□□□ -0.79
ITGA3-203ENST00000504417 ST20-MTHFSA0A0A6YYL1 179 aa10.14□□□□□ -0.79
ITGA3-203ENST00000504417 ABCB7O75027 752 aa10.14□□□□□ -0.79
ITGA3-203ENST00000504417 NUTM2GQ5VZR2 741 aa10.14□□□□□ -0.79
ITGA3-203ENST00000504417 PCGF6Q9BYE7 350 aa10.14□□□□□ -0.79
ITGA3-203ENST00000504417 BTG4Q9NY30 223 aa10.14□□□□□ -0.79
ITGA3-203ENST00000504417 AATKQ6ZMQ8 1374 aa10.14□□□□□ -0.79
ITGA3-203ENST00000504417 KTN1Q86UP2 1357 aaKnown RBP10.14□□□□□ -0.79
ITGA3-203ENST00000504417 NUP188Q5SRE5 1749 aa10.13□□□□□ -0.79
ITGA3-203ENST00000504417 SPATA31A1Q5TZJ5 1347 aa10.13□□□□□ -0.79
ITGA3-203ENST00000504417 SPDYE4A6NLX3 237 aa10.13□□□□□ -0.79
ITGA3-203ENST00000504417 GCP02774 474 aa10.13□□□□□ -0.79
ITGA3-203ENST00000504417 DSG3P32926 999 aa10.13□□□□□ -0.79
ITGA3-203ENST00000504417 ABTB2Q8N961 1025 aa10.13□□□□□ -0.79
ITGA3-203ENST00000504417 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
ITGA3-203ENST00000504417 CHRNA2Q15822 529 aa10.12□□□□□ -0.79
ITGA3-203ENST00000504417 ZNF692Q9BU19 519 aaPredicted RBP10.12□□□□□ -0.79
ITGA3-203ENST00000504417 PRDM11Q9NQV5 511 aa10.12□□□□□ -0.79
ITGA3-203ENST00000504417 DISP2A7MBM2 1401 aa10.12□□□□□ -0.79
ITGA3-203ENST00000504417 ANKRD36BQ8N2N9 1353 aa10.12□□□□□ -0.79
ITGA3-203ENST00000504417 PLEKHG5O94827 1062 aa10.11□□□□□ -0.79
ITGA3-203ENST00000504417 ZC3H6P61129 1189 aaKnown RBP10.11□□□□□ -0.79
ITGA3-203ENST00000504417 NLRP13Q86W25 1043 aa10.11□□□□□ -0.79
ITGA3-203ENST00000504417 SLC12A5Q9H2X9 1139 aa10.11□□□□□ -0.79
ITGA3-203ENST00000504417 BLMP54132 1417 aaPredicted RBP10.1□□□□□ -0.79
ITGA3-203ENST00000504417 CRB1P82279 1406 aa10.1□□□□□ -0.79
ITGA3-203ENST00000504417 ARHGEF25Q86VW2 580 aa10.1□□□□□ -0.79
ITGA3-203ENST00000504417 SEPT12Q8IYM1 358 aa10.1□□□□□ -0.79
ITGA3-203ENST00000504417 PROM2Q8N271 834 aa10.1□□□□□ -0.79
ITGA3-203ENST00000504417 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
ITGA3-203ENST00000504417 ZBTB12Q9Y330 459 aaPredicted RBP10.1□□□□□ -0.79
ITGA3-203ENST00000504417 NHSQ6T4R5 1651 aa10.09□□□□□ -0.79
ITGA3-203ENST00000504417 NLRP6P59044 892 aa10.08□□□□□ -0.8
ITGA3-203ENST00000504417 LARP1Q6PKG0 1096 aaKnown RBP10.08□□□□□ -0.8
ITGA3-203ENST00000504417 BARGINQ6ZT62 677 aa10.08□□□□□ -0.8
ITGA3-203ENST00000504417 NME9Q86XW9 330 aa10.08□□□□□ -0.8
ITGA3-203ENST00000504417 AXIN2Q9Y2T1 843 aa10.08□□□□□ -0.8
ITGA3-203ENST00000504417 FAM98CQ17RN3 349 aaKnown RBP10.07□□□□□ -0.8
ITGA3-203ENST00000504417 PKD1L3Q7Z443 1732 aa10.07□□□□□ -0.8
ITGA3-203ENST00000504417 SRCAPQ6ZRS2 3230 aa10.07□□□□□ -0.8
ITGA3-203ENST00000504417 BTAF1O14981 1849 aa10.06□□□□□ -0.8
ITGA3-203ENST00000504417 VIRMAQ69YN4 1812 aaKnown RBP10.06□□□□□ -0.8
ITGA3-203ENST00000504417 KRT27Q7Z3Y8 459 aa10.06□□□□□ -0.8
ITGA3-203ENST00000504417 LRP5O75197 1615 aa10.06□□□□□ -0.8
ITGA3-203ENST00000504417 KAT6BQ8WYB5 2073 aa10.06□□□□□ -0.8
ITGA3-203ENST00000504417 BCL9O00512 1426 aa10.06□□□□□ -0.8
ITGA3-203ENST00000504417 WDR17Q8IZU2 1322 aa10.06□□□□□ -0.8
ITGA3-203ENST00000504417 DOT1LQ8TEK3 1739 aa10.05□□□□□ -0.8
ITGA3-203ENST00000504417 SLC24A1O60721 1099 aa10.05□□□□□ -0.8
ITGA3-203ENST00000504417 KCNH5Q8NCM2 988 aa10.05□□□□□ -0.8
ITGA3-203ENST00000504417 TNS2Q63HR2 1409 aa10.05□□□□□ -0.8
ITGA3-203ENST00000504417 TMF1P82094 1093 aa10.04□□□□□ -0.8
ITGA3-203ENST00000504417 HDGFL2Q7Z4V5 671 aaPredicted RBP10.04□□□□□ -0.8
ITGA3-203ENST00000504417 STRN4Q9NRL3 753 aa10.04□□□□□ -0.8
ITGA3-203ENST00000504417 THRAP3Q9Y2W1 955 aaKnown RBP10.04□□□□□ -0.8
ITGA3-203ENST00000504417 TUBGCP6Q96RT7 1819 aa10.04□□□□□ -0.8
ITGA3-203ENST00000504417 NCAPD2Q15021 1401 aa10.04□□□□□ -0.8
ITGA3-203ENST00000504417 ERBB3P21860 1342 aa10.04□□□□□ -0.8
ITGA3-203ENST00000504417 RTL1A6NKG5 1358 aa10.03□□□□□ -0.8
ITGA3-203ENST00000504417 ITGB4P16144 1822 aa10.03□□□□□ -0.8
ITGA3-203ENST00000504417 LY75O60449 1722 aa10.03□□□□□ -0.8
ITGA3-203ENST00000504417 CCDC125Q86Z20 511 aa10.03□□□□□ -0.8
ITGA3-203ENST00000504417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.03□□□□□ -0.8
ITGA3-203ENST00000504417 TCP11L2Q8N4U5 519 aa10.03□□□□□ -0.8
ITGA3-203ENST00000504417 TMC1Q8TDI8 760 aa10.03□□□□□ -0.8
ITGA3-203ENST00000504417 NSD3Q9BZ95 1437 aa10.03□□□□□ -0.8
ITGA3-203ENST00000504417 TERF2IPQ9NYB0 399 aa10.03□□□□□ -0.8
ITGA3-203ENST00000504417 CCDC9Q9Y3X0 531 aaKnown RBP10.03□□□□□ -0.8
ITGA3-203ENST00000504417 TOGARAM1Q9Y4F4 1720 aa10.03□□□□□ -0.8
ITGA3-203ENST00000504417 PAPPAQ13219 1627 aa10.03□□□□□ -0.8
ITGA3-203ENST00000504417 QSER1Q2KHR3 1735 aa10.02□□□□□ -0.8
ITGA3-203ENST00000504417 CASZ1Q86V15 1759 aa10.02□□□□□ -0.81
ITGA3-203ENST00000504417 AMER1Q5JTC6 1135 aaPredicted RBP10.02□□□□□ -0.81
ITGA3-203ENST00000504417 CARD14Q9BXL6 1004 aa10.02□□□□□ -0.81
ITGA3-203ENST00000504417 RTN4Q9NQC3 1192 aaKnown RBP10.02□□□□□ -0.81
ITGA3-203ENST00000504417 HSPA5P11021 654 aaKnown RBP10.01□□□□□ -0.81
ITGA3-203ENST00000504417 CCER1Q8TC90 406 aaPredicted RBP10.01□□□□□ -0.81
ITGA3-203ENST00000504417 CCDC7Q96M83 1385 aa10.01□□□□□ -0.81
ITGA3-203ENST00000504417 OVOS2A0A0G2JMS6 1433 aa10□□□□□ -0.81
ITGA3-203ENST00000504417 SMG6Q86US8 1419 aaKnown RBP10□□□□□ -0.81
ITGA3-203ENST00000504417 COL24A1Q17RW2 1714 aa10□□□□□ -0.81
ITGA3-203ENST00000504417 FYB1O15117 783 aa10□□□□□ -0.81
ITGA3-203ENST00000504417 FAM182BQ5T319 152 aa10□□□□□ -0.81
ITGA3-203ENST00000504417 CARD10Q9BWT7 1032 aa10□□□□□ -0.81
ITGA3-203ENST00000504417 MAP3K19Q56UN5 1328 aa10□□□□□ -0.81
ITGA3-203ENST00000504417 TAF1LQ8IZX4 1826 aa10□□□□□ -0.81
ITGA3-203ENST00000504417 MEGF6O75095 1541 aa9.99□□□□□ -0.81
ITGA3-203ENST00000504417 DEFB132Q7Z7B7 95 aa9.99□□□□□ -0.81
ITGA3-203ENST00000504417 C11orf95C9JLR9 678 aaPredicted RBP9.98□□□□□ -0.81
ITGA3-203ENST00000504417 SOX12O15370 315 aa9.98□□□□□ -0.81
ITGA3-203ENST00000504417 CACNB1Q02641 598 aaPredicted RBP9.98□□□□□ -0.81
ITGA3-203ENST00000504417 CDCA8Q53HL2 280 aa9.98□□□□□ -0.81
ITGA3-203ENST00000504417 IP6K1Q92551 441 aa9.98□□□□□ -0.81
ITGA3-203ENST00000504417 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
ITGA3-203ENST00000504417 KIF24Q5T7B8 1368 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms