RNA–Protein interactions for RNA: ENST00000504221.5

CAST-212, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-212ENST00000504221 CD46P15529 392 aa12□□□□□ -0.49
CAST-212ENST00000504221 TRIM46Q7Z4K8 759 aa12□□□□□ -0.49
CAST-212ENST00000504221 ARHGEF40Q8TER5 1519 aa11.99□□□□□ -0.49
CAST-212ENST00000504221 FER1L4A9Z1Z3 1794 aa11.98□□□□□ -0.49
CAST-212ENST00000504221 ALDH1A1P00352 501 aa11.98□□□□□ -0.49
CAST-212ENST00000504221 IRF7Q92985 503 aa11.98□□□□□ -0.49
CAST-212ENST00000504221 PTPRKQ15262 1439 aa11.97□□□□□ -0.49
CAST-212ENST00000504221 H3BM21 787 aa11.97□□□□□ -0.49
CAST-212ENST00000504221 CCDC24Q8N4L8 307 aa11.97□□□□□ -0.49
CAST-212ENST00000504221 KDM4AO75164 1064 aa11.96□□□□□ -0.49
CAST-212ENST00000504221 SMYD5Q6GMV2 418 aa11.96□□□□□ -0.49
CAST-212ENST00000504221 SETD1AO15047 1707 aaKnown RBP11.96□□□□□ -0.49
CAST-212ENST00000504221 KIAA0556O60303 1618 aa11.96□□□□□ -0.5
CAST-212ENST00000504221 NEO1Q92859 1461 aa11.95□□□□□ -0.5
CAST-212ENST00000504221 HLA-CQ95604 372 aa11.95□□□□□ -0.5
CAST-212ENST00000504221 ERBB4Q15303 1308 aa11.94□□□□□ -0.5
CAST-212ENST00000504221 BMP1P13497 986 aa11.94□□□□□ -0.5
CAST-212ENST00000504221 SETD1BQ9UPS6 1966 aaKnown RBP11.93□□□□□ -0.5
CAST-212ENST00000504221 VEGFBP49765 207 aa11.93□□□□□ -0.5
CAST-212ENST00000504221 FRMPD1Q5SYB0 1578 aa11.92□□□□□ -0.5
CAST-212ENST00000504221 CAPN5O15484 640 aaPredicted RBP11.92□□□□□ -0.5
CAST-212ENST00000504221 PTCRAQ6ISU1 281 aaPredicted RBP11.91□□□□□ -0.5
CAST-212ENST00000504221 ARHGEF12Q9NZN5 1544 aa11.91□□□□□ -0.5
CAST-212ENST00000504221 JUNDP17535 347 aa11.89□□□□□ -0.51
CAST-212ENST00000504221 USP46P62068 366 aa11.89□□□□□ -0.51
CAST-212ENST00000504221 TRAPPC8Q9Y2L5 1435 aa11.87□□□□□ -0.51
CAST-212ENST00000504221 CPS1P31327 1500 aa11.87□□□□□ -0.51
CAST-212ENST00000504221 CAMSAP1Q5T5Y3 1602 aa11.87□□□□□ -0.51
CAST-212ENST00000504221 HOXA2O43364 376 aa11.87□□□□□ -0.51
CAST-212ENST00000504221 DENND4BO75064 1496 aaPredicted RBP11.87□□□□□ -0.51
CAST-212ENST00000504221 EHBP1Q8NDI1 1231 aa11.86□□□□□ -0.51
CAST-212ENST00000504221 ZFP42Q96MM3 310 aa11.86□□□□□ -0.51
CAST-212ENST00000504221 SYMPKQ92797 1274 aaKnown RBP11.85□□□□□ -0.51
CAST-212ENST00000504221 EFCAB5A4FU69 1503 aa11.85□□□□□ -0.51
CAST-212ENST00000504221 FHOD3Q2V2M9 1422 aa11.85□□□□□ -0.51
CAST-212ENST00000504221 SRCAPQ6ZRS2 3230 aa11.84□□□□□ -0.51
CAST-212ENST00000504221 SH3BP2P78314 561 aa11.84□□□□□ -0.51
CAST-212ENST00000504221 TRIM52Q96A61 297 aa11.84□□□□□ -0.51
CAST-212ENST00000504221 WASF2Q9Y6W5 498 aa11.84□□□□□ -0.51
CAST-212ENST00000504221 ZFYVE16Q7Z3T8 1539 aa11.84□□□□□ -0.51
CAST-212ENST00000504221 MAGI2Q86UL8 1455 aa11.83□□□□□ -0.52
CAST-212ENST00000504221 GUCA2AQ02747 115 aa11.83□□□□□ -0.52
CAST-212ENST00000504221 SUZ12Q15022 739 aaKnown RBP11.83□□□□□ -0.52
CAST-212ENST00000504221 NUDT12Q9BQG2 462 aa11.83□□□□□ -0.52
CAST-212ENST00000504221 DISP1Q96F81 1524 aa11.81□□□□□ -0.52
CAST-212ENST00000504221 SIGLEC1Q9BZZ2 1709 aa11.81□□□□□ -0.52
CAST-212ENST00000504221 ESF1Q9H501 851 aaKnown RBP11.81□□□□□ -0.52
CAST-212ENST00000504221 VSIG8P0DPA2 414 aa11.8□□□□□ -0.52
CAST-212ENST00000504221 GPIHBP1Q8IV16 184 aa11.8□□□□□ -0.52
CAST-212ENST00000504221 RETREG3Q86VR2 466 aa11.79□□□□□ -0.52
CAST-212ENST00000504221 ABCA9Q8IUA7 1624 aa11.78□□□□□ -0.52
CAST-212ENST00000504221 GSK3AP49840 483 aa11.78□□□□□ -0.52
CAST-212ENST00000504221 ALKQ9UM73 1620 aa11.78□□□□□ -0.52
CAST-212ENST00000504221 PLA2R1Q13018 1463 aa11.77□□□□□ -0.52
CAST-212ENST00000504221 ZMYM4Q5VZL5 1548 aa11.77□□□□□ -0.52
CAST-212ENST00000504221 MAP2K5Q13163 448 aa11.77□□□□□ -0.53
CAST-212ENST00000504221 SHANK2Q9UPX8 1470 aa11.76□□□□□ -0.53
CAST-212ENST00000504221 IQGAP2Q13576 1575 aa11.76□□□□□ -0.53
CAST-212ENST00000504221 YY1P25490 414 aa11.76□□□□□ -0.53
CAST-212ENST00000504221 MDM2Q00987 491 aaPredicted RBP11.76□□□□□ -0.53
CAST-212ENST00000504221 ZNF772Q68DY9 489 aaPredicted RBP11.76□□□□□ -0.53
CAST-212ENST00000504221 MPNDQ8N594 471 aa11.76□□□□□ -0.53
CAST-212ENST00000504221 ATP10AO60312 1499 aa11.76□□□□□ -0.53
CAST-212ENST00000504221 RICTORQ6R327 1708 aa11.75□□□□□ -0.53
CAST-212ENST00000504221 IRF6O14896 467 aa11.75□□□□□ -0.53
CAST-212ENST00000504221 C9orf84Q5VXU9 1444 aa11.75□□□□□ -0.53
CAST-212ENST00000504221 RXRBP28702 533 aa11.74□□□□□ -0.53
CAST-212ENST00000504221 KCNMA1Q12791 1236 aa11.74□□□□□ -0.53
CAST-212ENST00000504221 MRPL14Q6P1L8 145 aaKnown RBP11.74□□□□□ -0.53
CAST-212ENST00000504221 TCOF1Q13428 1488 aaKnown RBP11.74□□□□□ -0.53
CAST-212ENST00000504221 RAPGEF2Q9Y4G8 1499 aa11.74□□□□□ -0.53
CAST-212ENST00000504221 SETBP1Q9Y6X0 1596 aa11.74□□□□□ -0.53
CAST-212ENST00000504221 KLF16Q9BXK1 252 aaPredicted RBP11.73□□□□□ -0.53
CAST-212ENST00000504221 TLL2Q9Y6L7 1015 aa11.73□□□□□ -0.53
CAST-212ENST00000504221 CCNYL3P0C7X3 344 aa11.72□□□□□ -0.53
CAST-212ENST00000504221 EVA1BQ9NVM1 165 aa11.72□□□□□ -0.53
CAST-212ENST00000504221 PCDHGC3Q9UN70 934 aa11.72□□□□□ -0.53
CAST-212ENST00000504221 IGF1RP08069 1367 aa11.71□□□□□ -0.53
CAST-212ENST00000504221 SENP3-EIF4A1A0A087X0R7 540 aa11.71□□□□□ -0.53
CAST-212ENST00000504221 TIMP2P16035 220 aa11.71□□□□□ -0.53
CAST-212ENST00000504221 NNTQ13423 1086 aa11.71□□□□□ -0.53
CAST-212ENST00000504221 PURBQ96QR8 312 aaKnown RBP11.71□□□□□ -0.53
CAST-212ENST00000504221 UNC93B1Q9H1C4 597 aa11.71□□□□□ -0.53
CAST-212ENST00000504221 C3P01024 1663 aa11.71□□□□□ -0.54
CAST-212ENST00000504221 SOBPA7XYQ1 873 aa11.7□□□□□ -0.54
CAST-212ENST00000504221 MS4A1P11836 297 aa11.7□□□□□ -0.54
CAST-212ENST00000504221 BAP1Q92560 729 aa11.7□□□□□ -0.54
CAST-212ENST00000504221 PLEKHG3A1L390 1219 aa11.69□□□□□ -0.54
CAST-212ENST00000504221 SCARF1Q14162 830 aa11.69□□□□□ -0.54
CAST-212ENST00000504221 FAM217BQ9NTX9 383 aaPredicted RBP11.69□□□□□ -0.54
CAST-212ENST00000504221 LRRC7Q96NW7 1537 aa11.69□□□□□ -0.54
CAST-212ENST00000504221 NPATQ14207 1427 aa11.69□□□□□ -0.54
CAST-212ENST00000504221 VARSP26640 1264 aaKnown RBP11.68□□□□□ -0.54
CAST-212ENST00000504221 PTPRNQ16849 979 aa11.68□□□□□ -0.54
CAST-212ENST00000504221 CDK12Q9NYV4 1490 aaPredicted RBP11.68□□□□□ -0.54
CAST-212ENST00000504221 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
CAST-212ENST00000504221 KCTD17Q8N5Z5 321 aa11.67□□□□□ -0.54
CAST-212ENST00000504221 MINK1Q8N4C8 1332 aaPredicted RBP11.66□□□□□ -0.54
CAST-212ENST00000504221 FDX1P10109 184 aa11.66□□□□□ -0.54
CAST-212ENST00000504221 KCNH2Q12809 1159 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms