RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 KNSTRNQ9Y448 316 aa4.58□□□□□ -1.68
PCDH11X-208ENST00000504220 SLIT1O75093 1534 aa4.58□□□□□ -1.68
PCDH11X-208ENST00000504220 MED14O60244 1454 aa4.58□□□□□ -1.68
PCDH11X-208ENST00000504220 SATB1Q01826 763 aa4.58□□□□□ -1.68
PCDH11X-208ENST00000504220 ERVK-7P63135 1459 aa4.58□□□□□ -1.68
PCDH11X-208ENST00000504220 SPHKAPQ2M3C7 1700 aa4.58□□□□□ -1.68
PCDH11X-208ENST00000504220 NUTM2DQ5VT03 806 aaPredicted RBP4.58□□□□□ -1.68
PCDH11X-208ENST00000504220 DDX46Q7L014 1031 aaKnown RBP4.58□□□□□ -1.68
PCDH11X-208ENST00000504220 FAM177A1Q8N128 213 aaPredicted RBP4.58□□□□□ -1.68
PCDH11X-208ENST00000504220 PSMD1Q99460 953 aa4.58□□□□□ -1.68
PCDH11X-208ENST00000504220 KLHL33A6NCF5 533 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 U2SURPO15042 1029 aaKnown RBP4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 HSP90AB1P08238 724 aaKnown RBP4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 GPATCH11Q8N954 259 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 CEP83Q9Y592 693 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 IQGAP1P46940 1657 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 ARHGAP23Q9P227 1491 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 UHRF1BP1Q6BDS2 1440 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 UVSSAQ2YD98 709 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 CCDC184Q52MB2 194 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 SDR16C5Q8N3Y7 309 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 FOXD4L1Q9NU39 408 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 ZNF446Q9NWS9 450 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 MYO5BQ9ULV0 1848 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 CCER2I3L3R5 266 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 SAFB2Q14151 953 aaKnown RBP eCLIP4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 ILDR2Q71H61 639 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 GAS2L3Q86XJ1 694 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 XIRP1Q702N8 1843 aaKnown RBP4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 STRCP1A6NGW2 1772 aa4.57□□□□□ -1.68
PCDH11X-208ENST00000504220 CHMLP26374 656 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 GTF2F1P35269 517 aaKnown RBP eCLIP4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 KCNN1Q92952 543 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 TNPO1Q92973 898 aaKnown RBP4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 ITFG2Q969R8 447 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 TSPAN18Q96SJ8 248 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 ZMYM3Q14202 1370 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 TMEM131LA2VDJ0 1609 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 ADGRB3O60242 1522 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 NWD1Q149M9 1564 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 RBM5P52756 815 aaKnown RBP eCLIP4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 CGNQ9P2M7 1197 aaKnown RBP4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 IFT172Q9UG01 1749 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 SWT1Q5T5J6 900 aaKnown RBP4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 RINLQ6ZS11 566 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 MICALL1Q8N3F8 863 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 TATDN2Q93075 761 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 CLUAP1Q96AJ1 413 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 PANK3Q9H999 370 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 BSDC1Q9NW68 430 aaPredicted RBP4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 NOS1P29475 1434 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 SCP2P22307 547 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 ZKSCAN8Q15776 578 aaPredicted RBP4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 NUTM2GQ5VZR2 741 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 PHF8Q9UPP1 1060 aa4.56□□□□□ -1.68
PCDH11X-208ENST00000504220 HSPA5P11021 654 aaKnown RBP4.55□□□□□ -1.68
PCDH11X-208ENST00000504220 PKD2Q13563 968 aa4.55□□□□□ -1.68
PCDH11X-208ENST00000504220 HSP90AB3PQ58FF7 597 aa4.55□□□□□ -1.68
PCDH11X-208ENST00000504220 KIF15Q9NS87 1388 aa4.55□□□□□ -1.68
PCDH11X-208ENST00000504220 SETD1AO15047 1707 aaKnown RBP4.55□□□□□ -1.68
PCDH11X-208ENST00000504220 MAP9Q49MG5 647 aa4.55□□□□□ -1.68
PCDH11X-208ENST00000504220 MAP7D2Q96T17 732 aa4.55□□□□□ -1.68
PCDH11X-208ENST00000504220 CCDC172P0C7W6 258 aa4.55□□□□□ -1.68
PCDH11X-208ENST00000504220 LMOD2Q6P5Q4 547 aa4.55□□□□□ -1.68
PCDH11X-208ENST00000504220 NUP155O75694 1391 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 ZRSR1Q15695 479 aaKnown RBP4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 KCNV1Q6PIU1 500 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 DONSONQ9NYP3 566 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 PLIN1O60240 522 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 KDM4AO75164 1064 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 PDE4AP27815 886 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 CEBPAP49715 358 aaPredicted RBP4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 FOXD4L5Q5VV16 416 aaPredicted RBP4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 SKAP1Q86WV1 359 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 BANK1Q8NDB2 785 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 FOXD4L4Q8WXT5 416 aaPredicted RBP4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 PPP1R9BQ96SB3 815 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 ANKRD30AQ9BXX3 1397 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 DIP2AQ14689 1571 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 ALDH1B1P30837 517 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 TAF3Q5VWG9 929 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 ZNF513Q8N8E2 541 aaPredicted RBP4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 CERKQ8TCT0 537 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 NCAPGQ9BPX3 1015 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 EFCC1Q9HA90 598 aa4.54□□□□□ -1.68
PCDH11X-208ENST00000504220 ALKQ9UM73 1620 aa4.53□□□□□ -1.68
PCDH11X-208ENST00000504220 TRIM6-TRIM34B2RNG4 842 aa4.53□□□□□ -1.68
PCDH11X-208ENST00000504220 MSNP26038 577 aaKnown RBP4.53□□□□□ -1.68
PCDH11X-208ENST00000504220 MYBPC2Q14324 1141 aa4.53□□□□□ -1.68
PCDH11X-208ENST00000504220 FOXD4L6Q3SYB3 417 aaPredicted RBP4.53□□□□□ -1.68
PCDH11X-208ENST00000504220 FOXD4L3Q6VB84 417 aaPredicted RBP4.53□□□□□ -1.68
PCDH11X-208ENST00000504220 NOL8Q76FK4 1167 aaKnown RBP4.53□□□□□ -1.68
PCDH11X-208ENST00000504220 TRIM34Q9BYJ4 488 aa4.53□□□□□ -1.68
PCDH11X-208ENST00000504220 TRPM2O94759 1503 aa4.53□□□□□ -1.68
PCDH11X-208ENST00000504220 NRXN3Q9Y4C0 1643 aa4.53□□□□□ -1.68
PCDH11X-208ENST00000504220 DHX16O60231 1041 aaKnown RBP4.53□□□□□ -1.68
PCDH11X-208ENST00000504220 KCNJ4P48050 445 aa4.53□□□□□ -1.68
PCDH11X-208ENST00000504220 CPS1P31327 1500 aa4.53□□□□□ -1.68
PCDH11X-208ENST00000504220 CHD2O14647 1828 aaKnown RBP4.53□□□□□ -1.68
PCDH11X-208ENST00000504220 GYS2P54840 703 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms