RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 STK3Q13188 491 aa8.55□□□□□ -1.04
SYNPO2-205ENST00000504178 CEBPZQ03701 1054 aaKnown RBP8.55□□□□□ -1.04
SYNPO2-205ENST00000504178 MYO6Q9UM54 1294 aa8.55□□□□□ -1.04
SYNPO2-205ENST00000504178 NEK4P51957 841 aa8.55□□□□□ -1.04
SYNPO2-205ENST00000504178 STK38Q15208 465 aa8.55□□□□□ -1.04
SYNPO2-205ENST00000504178 CCDC57Q2TAC2 916 aa8.55□□□□□ -1.04
SYNPO2-205ENST00000504178 NBPF1Q3BBV0 1214 aa8.55□□□□□ -1.04
SYNPO2-205ENST00000504178 SRCIN1Q9C0H9 1055 aa8.55□□□□□ -1.04
SYNPO2-205ENST00000504178 MCM2P49736 904 aa8.55□□□□□ -1.04
SYNPO2-205ENST00000504178 MPHOSPH8Q99549 860 aa8.55□□□□□ -1.04
SYNPO2-205ENST00000504178 RABEP1Q15276 862 aa8.54□□□□□ -1.04
SYNPO2-205ENST00000504178 NESP48681 1621 aa8.54□□□□□ -1.04
SYNPO2-205ENST00000504178 BRPF1P55201 1214 aaPredicted RBP8.54□□□□□ -1.04
SYNPO2-205ENST00000504178 CC2D2AQ9P2K1 1620 aa8.54□□□□□ -1.04
SYNPO2-205ENST00000504178 CYP46A1Q9Y6A2 500 aa8.54□□□□□ -1.04
SYNPO2-205ENST00000504178 ARAP1Q96P48 1450 aa8.54□□□□□ -1.04
SYNPO2-205ENST00000504178 NUP133Q8WUM0 1156 aa8.54□□□□□ -1.04
SYNPO2-205ENST00000504178 SLC12A5Q9H2X9 1139 aa8.54□□□□□ -1.04
SYNPO2-205ENST00000504178 NASPP49321 788 aaPredicted RBP8.54□□□□□ -1.04
SYNPO2-205ENST00000504178 ANKRD1Q15327 319 aa8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 SOGA3Q5TF21 947 aa8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 AACSQ86V21 672 aa8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 TRIM5Q9C035 493 aa8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 DAPK1P53355 1430 aa8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 PIP4K2AP48426 406 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 RRS1Q15050 365 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 AEBP1Q8IUX7 1158 aa8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 FAM13BQ9NYF5 915 aa8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 PDCP20941 246 aa8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 CAVIN1Q6NZI2 390 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 BICDL1Q6ZP65 573 aa8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 TRIM22Q8IYM9 498 aa8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 XPCQ01831 940 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 CCP110O43303 1012 aa8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 FKBP4Q02790 459 aaKnown RBP eCLIP8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 RNF214Q8ND24 703 aa8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 RPGRIP1LQ68CZ1 1315 aa8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 PRPF40AO75400 957 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 SPINK5Q9NQ38 1064 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-205ENST00000504178 BCAR3O75815 825 aa8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 HSP90B2PQ58FF3 399 aa8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 TROQ12816 1431 aaPredicted RBP8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 SKIDA1Q1XH10 827 aa8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 WDR63Q8IWG1 891 aa8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 FAM43AQ8N2R8 423 aa8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 ZHX3Q9H4I2 956 aa8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 SLC52A1Q9NWF4 448 aa8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 ERCC4Q92889 916 aaPredicted RBP8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 PRDM11Q9NQV5 511 aa8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 ATAD2Q6PL18 1390 aa8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 NFKBIBQ15653 356 aa8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 JMYQ8N9B5 988 aa8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 RAI14Q9P0K7 980 aa8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 DACH1Q9UI36 760 aa8.52□□□□□ -1.05
SYNPO2-205ENST00000504178 FIBPO43427 364 aa8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 PAF1Q8N7H5 531 aa8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 NOL7Q9UMY1 257 aaKnown RBP8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 TOPBP1Q92547 1522 aa8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 MPHOSPH10O00566 681 aaKnown RBP8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 MBD3O95983 291 aa8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 ZSCAN29Q8IWY8 852 aaPredicted RBP8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 FMNL2Q96PY5 1086 aa8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 IGHMBP2P38935 993 aaKnown RBP8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 TDO2P48775 406 aa8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 TIAM1Q13009 1591 aa8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 PDE3AQ14432 1141 aa8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 SLC26A8Q96RN1 970 aa8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 TANGO6Q9C0B7 1094 aa8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 TOP2BQ02880 1626 aa8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 MRE11P49959 708 aa8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 EPRSP07814 1512 aaKnown RBP8.51□□□□□ -1.05
SYNPO2-205ENST00000504178 CT47B1P0C2W7 299 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-205ENST00000504178 STIM1Q13586 685 aa8.5□□□□□ -1.05
SYNPO2-205ENST00000504178 GNAT3A8MTJ3 354 aa8.5□□□□□ -1.05
SYNPO2-205ENST00000504178 NSD3Q9BZ95 1437 aa8.5□□□□□ -1.05
SYNPO2-205ENST00000504178 TRAK2O60296 914 aa8.5□□□□□ -1.05
SYNPO2-205ENST00000504178 RAPGEF3O95398 923 aa8.5□□□□□ -1.05
SYNPO2-205ENST00000504178 SERPINC1P01008 464 aa8.5□□□□□ -1.05
SYNPO2-205ENST00000504178 PDRG1Q9NUG6 133 aa8.5□□□□□ -1.05
SYNPO2-205ENST00000504178 ZNHIT6Q9NWK9 470 aaKnown RBP8.5□□□□□ -1.05
SYNPO2-205ENST00000504178 MATR3P43243 847 aaKnown RBP eCLIP8.5□□□□□ -1.05
SYNPO2-205ENST00000504178 PDCL3Q9H2J4 239 aa8.5□□□□□ -1.05
SYNPO2-205ENST00000504178 CDKL5O76039 1030 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 MVPQ14764 893 aaKnown RBP8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 ANKRD30BQ9BXX2 1392 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 DNMBPQ6XZF7 1577 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 KIF14Q15058 1648 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 FAM135AQ9P2D6 1515 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 SRGAP3O43295 1099 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 ZNF76P36508 570 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 DCTN1Q14203 1278 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 NOM1Q5C9Z4 860 aaKnown RBP8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 CHD1LQ86WJ1 897 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 UBAC1Q9BSL1 405 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 CDK13Q14004 1512 aaKnown RBP8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 ME1P48163 572 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 TNMDQ9H2S6 317 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 STARD3NLO95772 234 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 ATF7IPQ6VMQ6 1270 aa8.49□□□□□ -1.05
SYNPO2-205ENST00000504178 SPC24Q8NBT2 197 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms