RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 KCNH2Q12809 1159 aa8.07□□□□□ -1.12
GYPA-203ENST00000503627 OCLNQ16625 522 aa8.07□□□□□ -1.12
GYPA-203ENST00000503627 RNF135Q8IUD6 432 aa8.07□□□□□ -1.12
GYPA-203ENST00000503627 PLPP7Q8NBV4 271 aa8.07□□□□□ -1.12
GYPA-203ENST00000503627 CEP126Q9P2H0 1117 aa8.07□□□□□ -1.12
GYPA-203ENST00000503627 ZC3H4Q9UPT8 1303 aaKnown RBP8.06□□□□□ -1.12
GYPA-203ENST00000503627 DKK1O94907 266 aa8.06□□□□□ -1.12
GYPA-203ENST00000503627 MAPK1P28482 360 aa8.06□□□□□ -1.12
GYPA-203ENST00000503627 ECM1Q16610 540 aa8.06□□□□□ -1.12
GYPA-203ENST00000503627 TSNAXIP1Q2TAA8 658 aa8.06□□□□□ -1.12
GYPA-203ENST00000503627 SLFNL1Q499Z3 407 aa8.06□□□□□ -1.12
GYPA-203ENST00000503627 ADGRD1Q6QNK2 874 aa8.06□□□□□ -1.12
GYPA-203ENST00000503627 ZNF594Q96JF6 807 aaPredicted RBP8.06□□□□□ -1.12
GYPA-203ENST00000503627 ANO2Q9NQ90 1003 aa8.06□□□□□ -1.12
GYPA-203ENST00000503627 CXXC1Q9P0U4 656 aaPredicted RBP8.06□□□□□ -1.12
GYPA-203ENST00000503627 PPP1R1BQ9UD71 204 aaPredicted RBP8.06□□□□□ -1.12
GYPA-203ENST00000503627 CHIC2Q9UKJ5 165 aa8.06□□□□□ -1.12
GYPA-203ENST00000503627 PRMT3O60678 531 aa8.05□□□□□ -1.12
GYPA-203ENST00000503627 CFHP08603 1231 aa8.05□□□□□ -1.12
GYPA-203ENST00000503627 COL19A1Q14993 1142 aa8.05□□□□□ -1.12
GYPA-203ENST00000503627 GLYCTKQ8IVS8 523 aa8.05□□□□□ -1.12
GYPA-203ENST00000503627 DCTN4Q9UJW0 460 aa8.05□□□□□ -1.12
GYPA-203ENST00000503627 PSDA5PKW4 1024 aaPredicted RBP8.04□□□□□ -1.12
GYPA-203ENST00000503627 ARHGAP33O14559 1287 aa8.04□□□□□ -1.12
GYPA-203ENST00000503627 EIF5BO60841 1220 aaKnown RBP8.04□□□□□ -1.12
GYPA-203ENST00000503627 F12P00748 615 aaPredicted RBP8.04□□□□□ -1.12
GYPA-203ENST00000503627 ERCC5P28715 1186 aaPredicted RBP8.04□□□□□ -1.12
GYPA-203ENST00000503627 TRAF7Q6Q0C0 670 aa8.04□□□□□ -1.12
GYPA-203ENST00000503627 KIAA1468Q9P260 1216 aa8.04□□□□□ -1.12
GYPA-203ENST00000503627 C21orf2O43822 256 aa8.03□□□□□ -1.12
GYPA-203ENST00000503627 MRPL58Q14197 206 aaKnown RBP8.03□□□□□ -1.12
GYPA-203ENST00000503627 EML3Q32P44 896 aa8.03□□□□□ -1.12
GYPA-203ENST00000503627 PRIMPOLQ96LW4 560 aa8.03□□□□□ -1.12
GYPA-203ENST00000503627 DNAAF2Q9NVR5 837 aaKnown RBP8.03□□□□□ -1.12
GYPA-203ENST00000503627 KIAA1024Q9UPX6 916 aa8.03□□□□□ -1.12
GYPA-203ENST00000503627 ARHGAP4P98171 946 aa8.02□□□□□ -1.13
GYPA-203ENST00000503627 HDLBPQ00341 1268 aaKnown RBP8.02□□□□□ -1.13
GYPA-203ENST00000503627 MAP7D1Q3KQU3 841 aa8.02□□□□□ -1.13
GYPA-203ENST00000503627 TRIM50Q86XT4 487 aa8.02□□□□□ -1.13
GYPA-203ENST00000503627 SIX5Q8N196 739 aa8.02□□□□□ -1.13
GYPA-203ENST00000503627 BACH2Q9BYV9 841 aa8.02□□□□□ -1.13
GYPA-203ENST00000503627 TK2O00142 265 aa8.01□□□□□ -1.13
GYPA-203ENST00000503627 MORN1Q5T089 497 aa8.01□□□□□ -1.13
GYPA-203ENST00000503627 ZSCAN29Q8IWY8 852 aaPredicted RBP8.01□□□□□ -1.13
GYPA-203ENST00000503627 LARGE2Q8N3Y3 721 aa8.01□□□□□ -1.13
GYPA-203ENST00000503627 OCSTAMPQ9BR26 566 aa8.01□□□□□ -1.13
GYPA-203ENST00000503627 MAP10Q9P2G4 905 aa8.01□□□□□ -1.13
GYPA-203ENST00000503627 ZBTB7BO15156 539 aaPredicted RBP8□□□□□ -1.13
GYPA-203ENST00000503627 ATP1A2P50993 1020 aa8□□□□□ -1.13
GYPA-203ENST00000503627 EAPPQ56P03 285 aaPredicted RBP8□□□□□ -1.13
GYPA-203ENST00000503627 RGL4Q8IZJ4 473 aa8□□□□□ -1.13
GYPA-203ENST00000503627 GTF3C2Q8WUA4 911 aaPredicted RBP8□□□□□ -1.13
GYPA-203ENST00000503627 PCDHB9Q9Y5E1 797 aa8□□□□□ -1.13
GYPA-203ENST00000503627 DNMT3AQ9Y6K1 912 aaPredicted RBP8□□□□□ -1.13
GYPA-203ENST00000503627 SCAMP3O14828 347 aaKnown RBP7.99□□□□□ -1.13
GYPA-203ENST00000503627 MCCD1P59942 119 aaPredicted RBP7.99□□□□□ -1.13
GYPA-203ENST00000503627 RAD51AP2Q09MP3 1159 aa7.99□□□□□ -1.13
GYPA-203ENST00000503627 Q3C1V9 767 aa7.99□□□□□ -1.13
GYPA-203ENST00000503627 TSGA10IPQ3SY00 556 aa7.99□□□□□ -1.13
GYPA-203ENST00000503627 LDLRAD1Q5T700 205 aa7.99□□□□□ -1.13
GYPA-203ENST00000503627 GIMAP6Q6P9H5 292 aa7.99□□□□□ -1.13
GYPA-203ENST00000503627 PIK3R5Q8WYR1 880 aa7.99□□□□□ -1.13
GYPA-203ENST00000503627 ZNF592Q92610 1267 aa7.99□□□□□ -1.13
GYPA-203ENST00000503627 SEPT3Q9UH03 358 aa7.99□□□□□ -1.13
GYPA-203ENST00000503627 NOD1Q9Y239 953 aa7.99□□□□□ -1.13
GYPA-203ENST00000503627 SLC27A5Q9Y2P5 690 aa7.99□□□□□ -1.13
GYPA-203ENST00000503627 GPSM3Q9Y4H4 160 aa7.99□□□□□ -1.13
GYPA-203ENST00000503627 HRO43593 1189 aa7.98□□□□□ -1.13
GYPA-203ENST00000503627 SEC13P55735 322 aa7.98□□□□□ -1.13
GYPA-203ENST00000503627 KCNK17Q96T54 332 aa7.98□□□□□ -1.13
GYPA-203ENST00000503627 ZBED2Q9BTP6 218 aa7.98□□□□□ -1.13
GYPA-203ENST00000503627 BCL11AQ9H165 835 aa7.98□□□□□ -1.13
GYPA-203ENST00000503627 SEPT9Q9UHD8 586 aaPredicted RBP7.98□□□□□ -1.13
GYPA-203ENST00000503627 P4HBP07237 508 aaKnown RBP7.97□□□□□ -1.13
GYPA-203ENST00000503627 NCLP19338 710 aaKnown RBP7.97□□□□□ -1.13
GYPA-203ENST00000503627 SLC4A3P48751 1232 aa7.97□□□□□ -1.13
GYPA-203ENST00000503627 MYT1Q01538 1121 aa7.97□□□□□ -1.13
GYPA-203ENST00000503627 SF3B2Q13435 895 aaKnown RBP7.97□□□□□ -1.13
GYPA-203ENST00000503627 C9orf131Q5VYM1 1079 aa7.97□□□□□ -1.13
GYPA-203ENST00000503627 DMRTA1Q5VZB9 504 aa7.97□□□□□ -1.13
GYPA-203ENST00000503627 RNF19BQ6ZMZ0 732 aa7.97□□□□□ -1.13
GYPA-203ENST00000503627 DPH6Q7L8W6 267 aa7.97□□□□□ -1.13
GYPA-203ENST00000503627 PSEN2P49810 448 aa7.96□□□□□ -1.14
GYPA-203ENST00000503627 FKBP4Q02790 459 aaKnown RBP eCLIP7.96□□□□□ -1.14
GYPA-203ENST00000503627 PTK2Q05397 1052 aa7.96□□□□□ -1.14
GYPA-203ENST00000503627 MTMR3Q13615 1198 aa7.96□□□□□ -1.14
GYPA-203ENST00000503627 PUS10Q3MIT2 529 aaKnown RBP7.96□□□□□ -1.14
GYPA-203ENST00000503627 PDXDC2PQ6P474 469 aa7.96□□□□□ -1.14
GYPA-203ENST00000503627 ANKRD13AQ8IZ07 590 aa7.96□□□□□ -1.14
GYPA-203ENST00000503627 ANKRD62A6NC57 917 aa7.95□□□□□ -1.14
GYPA-203ENST00000503627 SFI1A8K8P3 1242 aa7.95□□□□□ -1.14
GYPA-203ENST00000503627 HDGFP51858 240 aaKnown RBP7.95□□□□□ -1.14
GYPA-203ENST00000503627 GTF2IP78347 998 aa7.95□□□□□ -1.14
GYPA-203ENST00000503627 PTPRNQ16849 979 aa7.95□□□□□ -1.14
GYPA-203ENST00000503627 KMT5BQ4FZB7 885 aa7.95□□□□□ -1.14
GYPA-203ENST00000503627 CCDC102BQ68D86 513 aa7.95□□□□□ -1.14
GYPA-203ENST00000503627 BLOC1S3Q6QNY0 202 aa7.95□□□□□ -1.14
GYPA-203ENST00000503627 CCDC85AQ96PX6 553 aaPredicted RBP7.95□□□□□ -1.14
GYPA-203ENST00000503627 TINF2Q9BSI4 451 aa7.95□□□□□ -1.14
GYPA-203ENST00000503627 FMNL1O95466 1100 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms