RNA–Protein interactions for RNA: ENST00000503258.5

PDE4D-210, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-210ENST00000503258 SLC16A10Q8TF71 515 aa11.34□□□□□ -0.59
PDE4D-210ENST00000503258 CCDC9Q9Y3X0 531 aaKnown RBP11.34□□□□□ -0.59
PDE4D-210ENST00000503258 RGL3Q3MIN7 710 aa11.34□□□□□ -0.59
PDE4D-210ENST00000503258 ANKRD26Q9UPS8 1709 aa11.33□□□□□ -0.59
PDE4D-210ENST00000503258 PMFBP1Q8TBY8 1022 aa11.32□□□□□ -0.6
PDE4D-210ENST00000503258 NSD2O96028 1365 aa11.32□□□□□ -0.6
PDE4D-210ENST00000503258 GCP02774 474 aa11.32□□□□□ -0.6
PDE4D-210ENST00000503258 KIF13BQ9NQT8 1826 aa11.31□□□□□ -0.6
PDE4D-210ENST00000503258 PTGER2P43116 358 aa11.31□□□□□ -0.6
PDE4D-210ENST00000503258 PKD1L3Q7Z443 1732 aa11.31□□□□□ -0.6
PDE4D-210ENST00000503258 ARHGEF25Q86VW2 580 aa11.31□□□□□ -0.6
PDE4D-210ENST00000503258 CENPJQ9HC77 1338 aaPredicted RBP11.31□□□□□ -0.6
PDE4D-210ENST00000503258 MINK1Q8N4C8 1332 aaPredicted RBP11.3□□□□□ -0.6
PDE4D-210ENST00000503258 TRIM37O94972 964 aa11.3□□□□□ -0.6
PDE4D-210ENST00000503258 YY1P25490 414 aa11.3□□□□□ -0.6
PDE4D-210ENST00000503258 MTFR1LQ9H019 292 aa11.3□□□□□ -0.6
PDE4D-210ENST00000503258 KIF24Q5T7B8 1368 aa11.3□□□□□ -0.6
PDE4D-210ENST00000503258 PSDA5PKW4 1024 aaPredicted RBP11.3□□□□□ -0.6
PDE4D-210ENST00000503258 SLC24A1O60721 1099 aa11.3□□□□□ -0.6
PDE4D-210ENST00000503258 RTL1A6NKG5 1358 aa11.29□□□□□ -0.6
PDE4D-210ENST00000503258 SLC27A3Q5K4L6 730 aa11.29□□□□□ -0.6
PDE4D-210ENST00000503258 TRAK1Q9UPV9 953 aa11.29□□□□□ -0.6
PDE4D-210ENST00000503258 NCAPD2Q15021 1401 aa11.29□□□□□ -0.6
PDE4D-210ENST00000503258 LARP1Q6PKG0 1096 aaKnown RBP11.29□□□□□ -0.6
PDE4D-210ENST00000503258 CD163L1Q9NR16 1453 aa11.29□□□□□ -0.6
PDE4D-210ENST00000503258 C5P01031 1676 aa11.29□□□□□ -0.6
PDE4D-210ENST00000503258 TAF1LQ8IZX4 1826 aa11.28□□□□□ -0.6
PDE4D-210ENST00000503258 EVA1CP58658 441 aa11.28□□□□□ -0.6
PDE4D-210ENST00000503258 EDC4Q6P2E9 1401 aaKnown RBP11.28□□□□□ -0.6
PDE4D-210ENST00000503258 EVC2Q86UK5 1308 aa11.27□□□□□ -0.6
PDE4D-210ENST00000503258 DOT1LQ8TEK3 1739 aa11.27□□□□□ -0.61
PDE4D-210ENST00000503258 DDB1Q16531 1140 aa11.26□□□□□ -0.61
PDE4D-210ENST00000503258 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
PDE4D-210ENST00000503258 SLC15A2Q16348 729 aa11.26□□□□□ -0.61
PDE4D-210ENST00000503258 STK32BQ9NY57 414 aa11.26□□□□□ -0.61
PDE4D-210ENST00000503258 ABTB2Q8N961 1025 aa11.26□□□□□ -0.61
PDE4D-210ENST00000503258 DCAF11Q8TEB1 546 aa11.26□□□□□ -0.61
PDE4D-210ENST00000503258 CGNL1Q0VF96 1302 aa11.25□□□□□ -0.61
PDE4D-210ENST00000503258 NSD3Q9BZ95 1437 aa11.25□□□□□ -0.61
PDE4D-210ENST00000503258 TTC21BQ7Z4L5 1316 aa11.24□□□□□ -0.61
PDE4D-210ENST00000503258 ADCY9O60503 1353 aa11.24□□□□□ -0.61
PDE4D-210ENST00000503258 PROM2Q8N271 834 aa11.23□□□□□ -0.61
PDE4D-210ENST00000503258 MARCH10Q8NA82 808 aaPredicted RBP11.23□□□□□ -0.61
PDE4D-210ENST00000503258 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
PDE4D-210ENST00000503258 KIF20BQ96Q89 1820 aa11.23□□□□□ -0.61
PDE4D-210ENST00000503258 KIAA1551Q9HCM1 1747 aa11.23□□□□□ -0.61
PDE4D-210ENST00000503258 C10orf71Q711Q0 1435 aa11.23□□□□□ -0.61
PDE4D-210ENST00000503258 LMOD2Q6P5Q4 547 aa11.22□□□□□ -0.61
PDE4D-210ENST00000503258 ANKRD36BQ8N2N9 1353 aa11.21□□□□□ -0.61
PDE4D-210ENST00000503258 TXNRD1Q16881 649 aa11.21□□□□□ -0.61
PDE4D-210ENST00000503258 PAK3O75914 559 aaPredicted RBP11.21□□□□□ -0.62
PDE4D-210ENST00000503258 PPP1R1BQ9UD71 204 aaPredicted RBP11.21□□□□□ -0.62
PDE4D-210ENST00000503258 MAP2P11137 1827 aaKnown RBP11.2□□□□□ -0.62
PDE4D-210ENST00000503258 CHRNA2Q15822 529 aa11.2□□□□□ -0.62
PDE4D-210ENST00000503258 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
PDE4D-210ENST00000503258 TOGARAM1Q9Y4F4 1720 aa11.2□□□□□ -0.62
PDE4D-210ENST00000503258 A0A0G2JS52 829 aa11.2□□□□□ -0.62
PDE4D-210ENST00000503258 MYT1Q01538 1121 aa11.2□□□□□ -0.62
PDE4D-210ENST00000503258 STRN4Q9NRL3 753 aa11.2□□□□□ -0.62
PDE4D-210ENST00000503258 ERBB3P21860 1342 aa11.19□□□□□ -0.62
PDE4D-210ENST00000503258 EXOC5O00471 708 aa11.19□□□□□ -0.62
PDE4D-210ENST00000503258 ZC3H6P61129 1189 aaKnown RBP11.19□□□□□ -0.62
PDE4D-210ENST00000503258 UBR3Q6ZT12 1888 aa11.19□□□□□ -0.62
PDE4D-210ENST00000503258 ZNF784Q8NCA9 323 aaPredicted RBP11.18□□□□□ -0.62
PDE4D-210ENST00000503258 HIRIP3Q9BW71 556 aaPredicted RBP11.18□□□□□ -0.62
PDE4D-210ENST00000503258 C1QTNF8P60827 252 aa11.18□□□□□ -0.62
PDE4D-210ENST00000503258 SYT17Q9BSW7 474 aa11.18□□□□□ -0.62
PDE4D-210ENST00000503258 FLAD1Q8NFF5 587 aa11.17□□□□□ -0.62
PDE4D-210ENST00000503258 GRIN3BO60391 1043 aa11.17□□□□□ -0.62
PDE4D-210ENST00000503258 KTN1Q86UP2 1357 aaKnown RBP11.16□□□□□ -0.62
PDE4D-210ENST00000503258 C4BP0C0L5 1744 aa11.16□□□□□ -0.62
PDE4D-210ENST00000503258 SAFB2Q14151 953 aaKnown RBP eCLIP11.16□□□□□ -0.62
PDE4D-210ENST00000503258 ARFGEF1Q9Y6D6 1849 aa11.16□□□□□ -0.62
PDE4D-210ENST00000503258 NLRP6P59044 892 aa11.16□□□□□ -0.62
PDE4D-210ENST00000503258 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
PDE4D-210ENST00000503258 ARXQ96QS3 562 aa11.16□□□□□ -0.62
PDE4D-210ENST00000503258 COL5A3P25940 1745 aaPredicted RBP11.15□□□□□ -0.62
PDE4D-210ENST00000503258 ITGB4P16144 1822 aa11.15□□□□□ -0.62
PDE4D-210ENST00000503258 IL2RBP14784 551 aa11.15□□□□□ -0.62
PDE4D-210ENST00000503258 IFFO2Q5TF58 517 aa11.15□□□□□ -0.62
PDE4D-210ENST00000503258 BRCA1P38398 1863 aaKnown RBP11.15□□□□□ -0.62
PDE4D-210ENST00000503258 CABP1Q9NZU7 370 aa11.14□□□□□ -0.63
PDE4D-210ENST00000503258 AXIN2Q9Y2T1 843 aa11.14□□□□□ -0.63
PDE4D-210ENST00000503258 CD2APQ9Y5K6 639 aa11.14□□□□□ -0.63
PDE4D-210ENST00000503258 IP6K1Q92551 441 aa11.14□□□□□ -0.63
PDE4D-210ENST00000503258 MAP3K19Q56UN5 1328 aa11.13□□□□□ -0.63
PDE4D-210ENST00000503258 SRPK2P78362 688 aaKnown RBP11.13□□□□□ -0.63
PDE4D-210ENST00000503258 TNRC6CQ9HCJ0 1690 aaKnown RBP11.13□□□□□ -0.63
PDE4D-210ENST00000503258 FAM182BQ5T319 152 aa11.12□□□□□ -0.63
PDE4D-210ENST00000503258 FHDC1Q9C0D6 1143 aaPredicted RBP11.12□□□□□ -0.63
PDE4D-210ENST00000503258 RGPD2P0DJD1 1756 aa11.12□□□□□ -0.63
PDE4D-210ENST00000503258 PNPLA7Q6ZV29 1317 aa11.11□□□□□ -0.63
PDE4D-210ENST00000503258 EP400Q96L91 3159 aa11.11□□□□□ -0.63
PDE4D-210ENST00000503258 DLEC1Q9Y238 1755 aa11.11□□□□□ -0.63
PDE4D-210ENST00000503258 POLD1P28340 1107 aa11.1□□□□□ -0.63
PDE4D-210ENST00000503258 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
PDE4D-210ENST00000503258 CABP2Q9NPB3 220 aa11.1□□□□□ -0.63
PDE4D-210ENST00000503258 ROCK2O75116 1388 aaKnown RBP11.09□□□□□ -0.63
PDE4D-210ENST00000503258 SMG6Q86US8 1419 aaKnown RBP11.09□□□□□ -0.63
PDE4D-210ENST00000503258 KDM2AQ9Y2K7 1162 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms