RNA–Protein interactions for RNA: ENST00000503030.1

TSPAN17-203, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 909 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-203ENST00000503030 AXIN2Q9Y2T1 843 aa23.08■■□□□ 1.29
TSPAN17-203ENST00000503030 KNSTRNQ9Y448 316 aa23.08■■□□□ 1.29
TSPAN17-203ENST00000503030 COL5A2P05997 1499 aaPredicted RBP23.08■■□□□ 1.29
TSPAN17-203ENST00000503030 RGS12O14924 1447 aa23.08■■□□□ 1.28
TSPAN17-203ENST00000503030 CDK12Q9NYV4 1490 aaPredicted RBP23.07■■□□□ 1.28
TSPAN17-203ENST00000503030 RGPD5Q99666 1765 aa23.06■■□□□ 1.28
TSPAN17-203ENST00000503030 LARP1Q6PKG0 1096 aaKnown RBP23.06■■□□□ 1.28
TSPAN17-203ENST00000503030 SPATA31A5Q5VU36 1347 aa23.06■■□□□ 1.28
TSPAN17-203ENST00000503030 SPATA31A7Q8IWB4 1347 aa23.06■■□□□ 1.28
TSPAN17-203ENST00000503030 USP35Q9P2H5 1018 aa23.05■■□□□ 1.28
TSPAN17-203ENST00000503030 RRS1Q15050 365 aaKnown RBP23.04■■□□□ 1.28
TSPAN17-203ENST00000503030 MAP3K19Q56UN5 1328 aa23.04■■□□□ 1.28
TSPAN17-203ENST00000503030 ABCC6O95255 1503 aa23.03■■□□□ 1.28
TSPAN17-203ENST00000503030 ANKRD26Q9UPS8 1709 aa23.03■■□□□ 1.28
TSPAN17-203ENST00000503030 A0A0G2JS52 829 aa23.03■■□□□ 1.28
TSPAN17-203ENST00000503030 CSB-PGBD3P0DP91 1061 aa23.03■■□□□ 1.28
TSPAN17-203ENST00000503030 MYT1Q01538 1121 aa23.03■■□□□ 1.28
TSPAN17-203ENST00000503030 SPATA31A1Q5TZJ5 1347 aa23.03■■□□□ 1.28
TSPAN17-203ENST00000503030 AMPHP49418 695 aa23.02■■□□□ 1.28
TSPAN17-203ENST00000503030 FAM98CQ17RN3 349 aaKnown RBP23.02■■□□□ 1.28
TSPAN17-203ENST00000503030 TNNT2P45379 298 aaPredicted RBP23.01■■□□□ 1.27
TSPAN17-203ENST00000503030 TOM1L2Q6ZVM7 507 aa23.01■■□□□ 1.27
TSPAN17-203ENST00000503030 NSD2O96028 1365 aa23.01■■□□□ 1.27
TSPAN17-203ENST00000503030 WDR17Q8IZU2 1322 aa23■■□□□ 1.27
TSPAN17-203ENST00000503030 CRB1P82279 1406 aa22.99■■□□□ 1.27
TSPAN17-203ENST00000503030 SEPT12Q8IYM1 358 aa22.99■■□□□ 1.27
TSPAN17-203ENST00000503030 IP6K1Q92551 441 aa22.99■■□□□ 1.27
TSPAN17-203ENST00000503030 PER1O15534 1290 aaPredicted RBP22.98■■□□□ 1.27
TSPAN17-203ENST00000503030 HOXC9P31274 260 aa22.98■■□□□ 1.27
TSPAN17-203ENST00000503030 CNGB1Q14028 1251 aaPredicted RBP22.98■■□□□ 1.27
TSPAN17-203ENST00000503030 AMER1Q5JTC6 1135 aaPredicted RBP22.98■■□□□ 1.27
TSPAN17-203ENST00000503030 MORC1Q86VD1 984 aa22.98■■□□□ 1.27
TSPAN17-203ENST00000503030 ANKRD24Q8TF21 1146 aa22.98■■□□□ 1.27
TSPAN17-203ENST00000503030 LTV1Q96GA3 475 aaPredicted RBP22.98■■□□□ 1.27
TSPAN17-203ENST00000503030 TCP11L2Q8N4U5 519 aa22.97■■□□□ 1.27
TSPAN17-203ENST00000503030 BLMP54132 1417 aaPredicted RBP22.97■■□□□ 1.27
TSPAN17-203ENST00000503030 PPM1GO15355 546 aaPredicted RBP22.96■■□□□ 1.27
TSPAN17-203ENST00000503030 CC2D1BQ5T0F9 858 aaKnown RBP22.96■■□□□ 1.27
TSPAN17-203ENST00000503030 EMILIN1Q9Y6C2 1016 aa22.96■■□□□ 1.27
TSPAN17-203ENST00000503030 ERBB3P21860 1342 aa22.96■■□□□ 1.27
TSPAN17-203ENST00000503030 RTL1A6NKG5 1358 aa22.96■■□□□ 1.27
TSPAN17-203ENST00000503030 SOCS7O14512 581 aa22.95■■□□□ 1.26
TSPAN17-203ENST00000503030 ONECUT3O60422 494 aaPredicted RBP22.95■■□□□ 1.26
TSPAN17-203ENST00000503030 PEAK1Q9H792 1746 aa22.95■■□□□ 1.26
TSPAN17-203ENST00000503030 NLRP2Q9NX02 1062 aa22.94■■□□□ 1.26
TSPAN17-203ENST00000503030 MAP2P11137 1827 aaKnown RBP22.93■■□□□ 1.26
TSPAN17-203ENST00000503030 BRWD3Q6RI45 1802 aa22.93■■□□□ 1.26
TSPAN17-203ENST00000503030 FLT4P35916 1363 aa22.92■■□□□ 1.26
TSPAN17-203ENST00000503030 BARGINQ6ZT62 677 aa22.92■■□□□ 1.26
TSPAN17-203ENST00000503030 CARD10Q9BWT7 1032 aa22.92■■□□□ 1.26
TSPAN17-203ENST00000503030 THRAP3Q9Y2W1 955 aaKnown RBP22.92■■□□□ 1.26
TSPAN17-203ENST00000503030 THSD7AQ9UPZ6 1657 aa22.91■■□□□ 1.26
TSPAN17-203ENST00000503030 HSP90AB2PQ58FF8 381 aa22.91■■□□□ 1.26
TSPAN17-203ENST00000503030 POLKQ9UBT6 870 aa22.91■■□□□ 1.26
TSPAN17-203ENST00000503030 KIF24Q5T7B8 1368 aa22.9■■□□□ 1.26
TSPAN17-203ENST00000503030 SMG6Q86US8 1419 aaKnown RBP22.89■■□□□ 1.25
TSPAN17-203ENST00000503030 INSRP06213 1382 aa22.89■■□□□ 1.25
TSPAN17-203ENST00000503030 KRT27Q7Z3Y8 459 aa22.88■■□□□ 1.25
TSPAN17-203ENST00000503030 FAM208AQ9UK61 1670 aaKnown RBP22.87■■□□□ 1.25
TSPAN17-203ENST00000503030 NPC1L1Q9UHC9 1359 aa22.87■■□□□ 1.25
TSPAN17-203ENST00000503030 DDX10Q13206 875 aaKnown RBP22.86■■□□□ 1.25
TSPAN17-203ENST00000503030 WNK3Q9BYP7 1800 aa22.86■■□□□ 1.25
TSPAN17-203ENST00000503030 RGPD2P0DJD1 1756 aa22.85■■□□□ 1.25
TSPAN17-203ENST00000503030 FAM182BQ5T319 152 aa22.83■■□□□ 1.25
TSPAN17-203ENST00000503030 PARP4Q9UKK3 1724 aaKnown RBP22.82■■□□□ 1.24
TSPAN17-203ENST00000503030 EP400Q96L91 3159 aa22.82■■□□□ 1.24
TSPAN17-203ENST00000503030 PDE3BQ13370 1112 aa22.82■■□□□ 1.24
TSPAN17-203ENST00000503030 USHBP1Q8N6Y0 703 aa22.82■■□□□ 1.24
TSPAN17-203ENST00000503030 CDCA7Q9BWT1 371 aaPredicted RBP22.82■■□□□ 1.24
TSPAN17-203ENST00000503030 DISP2A7MBM2 1401 aa22.82■■□□□ 1.24
TSPAN17-203ENST00000503030 DDB1Q16531 1140 aa22.81■■□□□ 1.24
TSPAN17-203ENST00000503030 NBPF6Q5VWK0 638 aa22.81■■□□□ 1.24
TSPAN17-203ENST00000503030 NBPF4Q96M43 638 aa22.81■■□□□ 1.24
TSPAN17-203ENST00000503030 LRRC37A3O60309 1634 aa22.81■■□□□ 1.24
TSPAN17-203ENST00000503030 IL2RBP14784 551 aa22.8■■□□□ 1.24
TSPAN17-203ENST00000503030 UPF1Q92900 1129 aaKnown RBP eCLIP22.79■■□□□ 1.24
TSPAN17-203ENST00000503030 MTHFSP49914 203 aa22.78■■□□□ 1.24
TSPAN17-203ENST00000503030 EIF4A2Q14240 407 aaKnown RBP22.78■■□□□ 1.24
TSPAN17-203ENST00000503030 ZNF316A6NFI3 1004 aaPredicted RBP22.77■■□□□ 1.24
TSPAN17-203ENST00000503030 EXOC5O00471 708 aa22.76■■□□□ 1.23
TSPAN17-203ENST00000503030 EYA1Q99502 592 aa22.74■■□□□ 1.23
TSPAN17-203ENST00000503030 TNS2Q63HR2 1409 aa22.74■■□□□ 1.23
TSPAN17-203ENST00000503030 RAPGEF4Q8WZA2 1011 aa22.73■■□□□ 1.23
TSPAN17-203ENST00000503030 MEGF6O75095 1541 aa22.72■■□□□ 1.23
TSPAN17-203ENST00000503030 FAM196AQ6ZSG2 479 aa22.71■■□□□ 1.23
TSPAN17-203ENST00000503030 MARCH10Q8NA82 808 aaPredicted RBP22.71■■□□□ 1.23
TSPAN17-203ENST00000503030 TATP17735 454 aaPredicted RBP22.7■■□□□ 1.22
TSPAN17-203ENST00000503030 PPP2R1AP30153 589 aa22.7■■□□□ 1.22
TSPAN17-203ENST00000503030 OVOS2A0A0G2JMS6 1433 aa22.69■■□□□ 1.22
TSPAN17-203ENST00000503030 NCAPD2Q15021 1401 aa22.67■■□□□ 1.22
TSPAN17-203ENST00000503030 PARD3Q8TEW0 1356 aa22.67■■□□□ 1.22
TSPAN17-203ENST00000503030 IGSF1Q8N6C5 1336 aa22.67■■□□□ 1.22
TSPAN17-203ENST00000503030 IL13P35225 146 aa22.67■■□□□ 1.22
TSPAN17-203ENST00000503030 ZCRB1Q8TBF4 217 aaKnown RBP22.67■■□□□ 1.22
TSPAN17-203ENST00000503030 DDX54Q8TDD1 881 aaKnown RBP22.67■■□□□ 1.22
TSPAN17-203ENST00000503030 DIAPH1O60610 1272 aaKnown RBP22.66■■□□□ 1.22
TSPAN17-203ENST00000503030 TRIM37O94972 964 aa22.66■■□□□ 1.22
TSPAN17-203ENST00000503030 SF3B2Q13435 895 aaKnown RBP22.66■■□□□ 1.22
TSPAN17-203ENST00000503030 CCDC125Q86Z20 511 aa22.65■■□□□ 1.22
TSPAN17-203ENST00000503030 CFAP53Q96M91 514 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms