RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 SLC12A5Q9H2X9 1139 aa23.83■■□□□ 1.41
AP004609.1-201ENST00000498872 TOM1L2Q6ZVM7 507 aa23.82■■□□□ 1.4
AP004609.1-201ENST00000498872 THRAP3Q9Y2W1 955 aaKnown RBP23.82■■□□□ 1.4
AP004609.1-201ENST00000498872 ARHGEF25Q86VW2 580 aa23.81■■□□□ 1.4
AP004609.1-201ENST00000498872 KCNH5Q8NCM2 988 aa23.81■■□□□ 1.4
AP004609.1-201ENST00000498872 NFAT5O94916 1531 aa23.81■■□□□ 1.4
AP004609.1-201ENST00000498872 PSDA5PKW4 1024 aaPredicted RBP23.81■■□□□ 1.4
AP004609.1-201ENST00000498872 NME9Q86XW9 330 aa23.81■■□□□ 1.4
AP004609.1-201ENST00000498872 ST20-MTHFSA0A0A6YYL1 179 aa23.8■■□□□ 1.4
AP004609.1-201ENST00000498872 WNK3Q9BYP7 1800 aa23.8■■□□□ 1.4
AP004609.1-201ENST00000498872 EZH2Q15910 746 aaKnown RBP23.78■■□□□ 1.4
AP004609.1-201ENST00000498872 HDGFL2Q7Z4V5 671 aaPredicted RBP23.78■■□□□ 1.4
AP004609.1-201ENST00000498872 LRRC37A3O60309 1634 aa23.78■■□□□ 1.4
AP004609.1-201ENST00000498872 WDR17Q8IZU2 1322 aa23.78■■□□□ 1.4
AP004609.1-201ENST00000498872 LTN1O94822 1766 aa23.77■■□□□ 1.4
AP004609.1-201ENST00000498872 A0A1W2PP64 1363 aa23.77■■□□□ 1.4
AP004609.1-201ENST00000498872 APBA3O96018 575 aa23.77■■□□□ 1.4
AP004609.1-201ENST00000498872 TESK2Q96S53 571 aa23.77■■□□□ 1.4
AP004609.1-201ENST00000498872 USP54Q70EL1 1684 aa23.76■■□□□ 1.39
AP004609.1-201ENST00000498872 CSB-PGBD3P0DP91 1061 aa23.76■■□□□ 1.39
AP004609.1-201ENST00000498872 DISP2A7MBM2 1401 aa23.76■■□□□ 1.39
AP004609.1-201ENST00000498872 EDC4Q6P2E9 1401 aaKnown RBP23.74■■□□□ 1.39
AP004609.1-201ENST00000498872 TERF2IPQ9NYB0 399 aa23.73■■□□□ 1.39
AP004609.1-201ENST00000498872 USP31Q70CQ4 1352 aa23.73■■□□□ 1.39
AP004609.1-201ENST00000498872 CAMKK2Q96RR4 588 aa23.73■■□□□ 1.39
AP004609.1-201ENST00000498872 PEAK1Q9H792 1746 aa23.73■■□□□ 1.39
AP004609.1-201ENST00000498872 DDB1Q16531 1140 aa23.72■■□□□ 1.39
AP004609.1-201ENST00000498872 R3HDM1Q15032 1099 aaKnown RBP23.71■■□□□ 1.39
AP004609.1-201ENST00000498872 SBF2Q86WG5 1849 aa23.71■■□□□ 1.39
AP004609.1-201ENST00000498872 OVOS2A0A0G2JMS6 1433 aa23.69■■□□□ 1.38
AP004609.1-201ENST00000498872 OVOS2A0A0J9YW53 1432 aa23.69■■□□□ 1.38
AP004609.1-201ENST00000498872 OVOS2Q6IE36 1432 aa23.69■■□□□ 1.38
AP004609.1-201ENST00000498872 RREB1Q92766 1687 aa23.69■■□□□ 1.38
AP004609.1-201ENST00000498872 PUS7Q96PZ0 661 aaKnown RBP23.69■■□□□ 1.38
AP004609.1-201ENST00000498872 CARD10Q9BWT7 1032 aa23.69■■□□□ 1.38
AP004609.1-201ENST00000498872 USP47Q96K76 1375 aa23.68■■□□□ 1.38
AP004609.1-201ENST00000498872 NUP188Q5SRE5 1749 aa23.67■■□□□ 1.38
AP004609.1-201ENST00000498872 ABCC6O95255 1503 aa23.67■■□□□ 1.38
AP004609.1-201ENST00000498872 LRP5O75197 1615 aa23.65■■□□□ 1.38
AP004609.1-201ENST00000498872 MIER1Q8N108 512 aa23.65■■□□□ 1.38
AP004609.1-201ENST00000498872 PTF1AQ7RTS3 328 aa23.64■■□□□ 1.38
AP004609.1-201ENST00000498872 MARCH10Q8NA82 808 aaPredicted RBP23.64■■□□□ 1.38
AP004609.1-201ENST00000498872 NINLQ9Y2I6 1382 aa23.64■■□□□ 1.37
AP004609.1-201ENST00000498872 CDCA7Q9BWT1 371 aaPredicted RBP23.63■■□□□ 1.37
AP004609.1-201ENST00000498872 NLRP2Q9NX02 1062 aa23.63■■□□□ 1.37
AP004609.1-201ENST00000498872 ERBB3P21860 1342 aa23.63■■□□□ 1.37
AP004609.1-201ENST00000498872 PARD3Q8TEW0 1356 aa23.63■■□□□ 1.37
AP004609.1-201ENST00000498872 TMF1P82094 1093 aa23.62■■□□□ 1.37
AP004609.1-201ENST00000498872 CCDC7Q96M83 1385 aa23.62■■□□□ 1.37
AP004609.1-201ENST00000498872 FBLN1P23142 703 aa23.61■■□□□ 1.37
AP004609.1-201ENST00000498872 ANKRD24Q8TF21 1146 aa23.61■■□□□ 1.37
AP004609.1-201ENST00000498872 EXOC5O00471 708 aa23.6■■□□□ 1.37
AP004609.1-201ENST00000498872 SLC24A1O60721 1099 aa23.6■■□□□ 1.37
AP004609.1-201ENST00000498872 C11orf95C9JLR9 678 aaPredicted RBP23.59■■□□□ 1.37
AP004609.1-201ENST00000498872 ANKRD36BQ8N2N9 1353 aa23.59■■□□□ 1.37
AP004609.1-201ENST00000498872 COG3Q96JB2 828 aa23.59■■□□□ 1.37
AP004609.1-201ENST00000498872 LTV1Q96GA3 475 aaPredicted RBP23.58■■□□□ 1.36
AP004609.1-201ENST00000498872 TNS2Q63HR2 1409 aa23.57■■□□□ 1.36
AP004609.1-201ENST00000498872 BCL11BQ9C0K0 894 aaPredicted RBP23.55■■□□□ 1.36
AP004609.1-201ENST00000498872 RGPD3A6NKT7 1758 aaPredicted RBP23.55■■□□□ 1.36
AP004609.1-201ENST00000498872 RGPD4Q7Z3J3 1758 aa23.55■■□□□ 1.36
AP004609.1-201ENST00000498872 RGPD2P0DJD1 1756 aa23.55■■□□□ 1.36
AP004609.1-201ENST00000498872 IP6K1Q92551 441 aa23.55■■□□□ 1.36
AP004609.1-201ENST00000498872 NBPF14Q5TI25 921 aa23.54■■□□□ 1.36
AP004609.1-201ENST00000498872 GGNBP2Q9H3C7 697 aa23.54■■□□□ 1.36
AP004609.1-201ENST00000498872 MYOM1P52179 1685 aa23.54■■□□□ 1.36
AP004609.1-201ENST00000498872 MAP3K19Q56UN5 1328 aa23.53■■□□□ 1.36
AP004609.1-201ENST00000498872 IL2RBP14784 551 aa23.53■■□□□ 1.36
AP004609.1-201ENST00000498872 KIF20BQ96Q89 1820 aa23.53■■□□□ 1.36
AP004609.1-201ENST00000498872 FAM208AQ9UK61 1670 aaKnown RBP23.52■■□□□ 1.36
AP004609.1-201ENST00000498872 BCL9O00512 1426 aa23.52■■□□□ 1.36
AP004609.1-201ENST00000498872 FYB1O15117 783 aa23.51■■□□□ 1.35
AP004609.1-201ENST00000498872 PLSCR1O15162 318 aa23.51■■□□□ 1.35
AP004609.1-201ENST00000498872 KCNQ2O43526 872 aa23.51■■□□□ 1.35
AP004609.1-201ENST00000498872 ACSBG1Q96GR2 724 aa23.51■■□□□ 1.35
AP004609.1-201ENST00000498872 HOXC9P31274 260 aa23.5■■□□□ 1.35
AP004609.1-201ENST00000498872 AMPHP49418 695 aa23.5■■□□□ 1.35
AP004609.1-201ENST00000498872 RRS1Q15050 365 aaKnown RBP23.5■■□□□ 1.35
AP004609.1-201ENST00000498872 NHSQ6T4R5 1651 aa23.5■■□□□ 1.35
AP004609.1-201ENST00000498872 KAT6BQ8WYB5 2073 aa23.49■■□□□ 1.35
AP004609.1-201ENST00000498872 CDCA8Q53HL2 280 aa23.48■■□□□ 1.35
AP004609.1-201ENST00000498872 PROM2Q8N271 834 aa23.48■■□□□ 1.35
AP004609.1-201ENST00000498872 ANO8Q9HCE9 1232 aaPredicted RBP23.47■■□□□ 1.35
AP004609.1-201ENST00000498872 BTAF1O14981 1849 aa23.44■■□□□ 1.34
AP004609.1-201ENST00000498872 CARD14Q9BXL6 1004 aa23.44■■□□□ 1.34
AP004609.1-201ENST00000498872 DDX54Q8TDD1 881 aaKnown RBP23.44■■□□□ 1.34
AP004609.1-201ENST00000498872 POLR3GLQ9BT43 218 aa23.44■■□□□ 1.34
AP004609.1-201ENST00000498872 EIF4G2P78344 907 aaKnown RBP eCLIP23.43■■□□□ 1.34
AP004609.1-201ENST00000498872 TXNRD1Q16881 649 aa23.43■■□□□ 1.34
AP004609.1-201ENST00000498872 NSD3Q9BZ95 1437 aa23.43■■□□□ 1.34
AP004609.1-201ENST00000498872 HSPA5P11021 654 aaKnown RBP23.42■■□□□ 1.34
AP004609.1-201ENST00000498872 DDX10Q13206 875 aaKnown RBP23.41■■□□□ 1.34
AP004609.1-201ENST00000498872 SHANK3Q9BYB0 1731 aa23.41■■□□□ 1.34
AP004609.1-201ENST00000498872 RTL1A6NKG5 1358 aa23.41■■□□□ 1.34
AP004609.1-201ENST00000498872 USHBP1Q8N6Y0 703 aa23.41■■□□□ 1.34
AP004609.1-201ENST00000498872 PDGFDQ9GZP0 370 aaPredicted RBP23.41■■□□□ 1.34
AP004609.1-201ENST00000498872 CENPBP07199 599 aaPredicted RBP23.39■■□□□ 1.33
AP004609.1-201ENST00000498872 CASZ1Q86V15 1759 aa23.39■■□□□ 1.33
AP004609.1-201ENST00000498872 MEGF6O75095 1541 aa23.39■■□□□ 1.33
AP004609.1-201ENST00000498872 NBPF6Q5VWK0 638 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms