RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 KDM5DQ9BY66 1539 aa7.18□□□□□ -1.26
SOX2-OT-218ENST00000498731 U2SURPO15042 1029 aaKnown RBP7.18□□□□□ -1.26
SOX2-OT-218ENST00000498731 KIF20AO95235 890 aa7.18□□□□□ -1.26
SOX2-OT-218ENST00000498731 TNPO1Q92973 898 aaKnown RBP7.18□□□□□ -1.26
SOX2-OT-218ENST00000498731 ADAMTS8Q9UP79 889 aa7.18□□□□□ -1.26
SOX2-OT-218ENST00000498731 RRP7AQ9Y3A4 280 aaKnown RBP7.18□□□□□ -1.26
SOX2-OT-218ENST00000498731 PLXNC1O60486 1568 aa7.18□□□□□ -1.26
SOX2-OT-218ENST00000498731 UBAP1LF5GYI3 381 aa7.18□□□□□ -1.26
SOX2-OT-218ENST00000498731 KCNV2Q8TDN2 545 aa7.18□□□□□ -1.26
SOX2-OT-218ENST00000498731 DYNC1I1O14576 645 aa7.17□□□□□ -1.26
SOX2-OT-218ENST00000498731 NCLP19338 710 aaKnown RBP7.17□□□□□ -1.26
SOX2-OT-218ENST00000498731 TXNDC2Q86VQ3 553 aa7.17□□□□□ -1.26
SOX2-OT-218ENST00000498731 ZNF335Q9H4Z2 1342 aaPredicted RBP7.17□□□□□ -1.26
SOX2-OT-218ENST00000498731 PER1O15534 1290 aaPredicted RBP7.17□□□□□ -1.26
SOX2-OT-218ENST00000498731 PPP2R1AP30153 589 aa7.17□□□□□ -1.26
SOX2-OT-218ENST00000498731 SGSM3Q96HU1 749 aa7.17□□□□□ -1.26
SOX2-OT-218ENST00000498731 GGNBP2Q9H3C7 697 aa7.17□□□□□ -1.26
SOX2-OT-218ENST00000498731 CCDC125Q86Z20 511 aa7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 TBC1D32Q96NH3 1257 aa7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 TRAIPQ9BWF2 469 aa7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 RBSNQ9H1K0 784 aa7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 PRDM15P57071 1507 aaPredicted RBP7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 LETM1O95202 739 aaPredicted RBP7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 IRX3P78415 501 aaPredicted RBP7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 HS6ST3Q8IZP7 471 aa7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 GTPBP4Q9BZE4 634 aaKnown RBP7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 RNF39Q9H2S5 420 aa7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 C14orf93Q9H972 538 aaKnown RBP7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 KDM5CP41229 1560 aa7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 IQGAP3Q86VI3 1631 aa7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 BCAR3O75815 825 aa7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 BECN1Q14457 450 aa7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 UNC13BO14795 1591 aa7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 FRMPD1Q5SYB0 1578 aa7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 EVC2Q86UK5 1308 aa7.16□□□□□ -1.26
SOX2-OT-218ENST00000498731 APAF1O14727 1248 aa7.15□□□□□ -1.26
SOX2-OT-218ENST00000498731 CD2BP2O95400 341 aaKnown RBP7.15□□□□□ -1.26
SOX2-OT-218ENST00000498731 ANKLE2Q86XL3 938 aa7.15□□□□□ -1.26
SOX2-OT-218ENST00000498731 NOL7Q9UMY1 257 aaKnown RBP7.15□□□□□ -1.26
SOX2-OT-218ENST00000498731 SCAF11Q99590 1463 aaKnown RBP7.15□□□□□ -1.26
SOX2-OT-218ENST00000498731 TRIM6-TRIM34B2RNG4 842 aa7.15□□□□□ -1.26
SOX2-OT-218ENST00000498731 ZNF500O60304 480 aaPredicted RBP7.15□□□□□ -1.26
SOX2-OT-218ENST00000498731 CCDC173Q0VFZ6 552 aa7.15□□□□□ -1.26
SOX2-OT-218ENST00000498731 TRIM34Q9BYJ4 488 aa7.15□□□□□ -1.26
SOX2-OT-218ENST00000498731 SPINK5Q9NQ38 1064 aaPredicted RBP7.15□□□□□ -1.26
SOX2-OT-218ENST00000498731 TNNQ9UQP3 1299 aa7.15□□□□□ -1.26
SOX2-OT-218ENST00000498731 E9PCH4 1651 aa7.15□□□□□ -1.27
SOX2-OT-218ENST00000498731 CARNS1A5YM72 827 aa7.15□□□□□ -1.27
SOX2-OT-218ENST00000498731 FBLN1P23142 703 aa7.15□□□□□ -1.27
SOX2-OT-218ENST00000498731 TERF1P54274 439 aa7.15□□□□□ -1.27
SOX2-OT-218ENST00000498731 WWC1Q8IX03 1113 aa7.15□□□□□ -1.27
SOX2-OT-218ENST00000498731 THEMISQ8N1K5 641 aaPredicted RBP7.15□□□□□ -1.27
SOX2-OT-218ENST00000498731 TMX1Q9H3N1 280 aa7.15□□□□□ -1.27
SOX2-OT-218ENST00000498731 U2AF1L5P0DN76 240 aaPredicted RBP7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 U2AF1Q01081 240 aaKnown RBP eCLIP7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 CARD14Q9BXL6 1004 aa7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 EID1Q9Y6B2 187 aa7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 MAGI2Q86UL8 1455 aa7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 CERKQ8TCT0 537 aa7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 CFAP74Q9C0B2 1584 aa7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 KIDINS220Q9ULH0 1771 aa7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 CLTCL1P53675 1640 aa7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 ARHGEF40Q8TER5 1519 aa7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 MLH3Q9UHC1 1453 aa7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 BRD4O60885 1362 aaPredicted RBP7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 LOC102724159A0A0B4J2E5 919 aa7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 NAA30Q147X3 362 aaPredicted RBP7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 PWP2Q15269 919 aaKnown RBP7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 SASS6Q6UVJ0 657 aa7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 ZNF771Q7L3S4 317 aaPredicted RBP7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 RBM27Q9P2N5 1060 aaKnown RBP7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 RICTORQ6R327 1708 aa7.14□□□□□ -1.27
SOX2-OT-218ENST00000498731 DDIT3P35638 169 aa7.13□□□□□ -1.27
SOX2-OT-218ENST00000498731 MTHFSP49914 203 aa7.13□□□□□ -1.27
SOX2-OT-218ENST00000498731 CABP1Q9NZU7 370 aa7.13□□□□□ -1.27
SOX2-OT-218ENST00000498731 CHMP5Q9NZZ3 219 aa7.13□□□□□ -1.27
SOX2-OT-218ENST00000498731 PSEN1P49768 467 aa7.13□□□□□ -1.27
SOX2-OT-218ENST00000498731 FOXD4L6Q3SYB3 417 aaPredicted RBP7.13□□□□□ -1.27
SOX2-OT-218ENST00000498731 FOXD4L3Q6VB84 417 aaPredicted RBP7.13□□□□□ -1.27
SOX2-OT-218ENST00000498731 CFAP53Q96M91 514 aa7.13□□□□□ -1.27
SOX2-OT-218ENST00000498731 CDK19Q9BWU1 502 aa7.13□□□□□ -1.27
SOX2-OT-218ENST00000498731 BCL2L12Q9HB09 334 aa7.13□□□□□ -1.27
SOX2-OT-218ENST00000498731 ST7Q9NRC1 585 aa7.13□□□□□ -1.27
SOX2-OT-218ENST00000498731 PTPRTO14522 1441 aa7.13□□□□□ -1.27
SOX2-OT-218ENST00000498731 GPRASP1Q5JY77 1395 aa7.13□□□□□ -1.27
SOX2-OT-218ENST00000498731 RPGRIP1LQ68CZ1 1315 aa7.12□□□□□ -1.27
SOX2-OT-218ENST00000498731 CEP152O94986 1710 aa7.12□□□□□ -1.27
SOX2-OT-218ENST00000498731 ERICH4A6NGS2 130 aa7.12□□□□□ -1.27
SOX2-OT-218ENST00000498731 SSFA2P28290 1259 aa7.12□□□□□ -1.27
SOX2-OT-218ENST00000498731 PRIM1P49642 420 aaKnown RBP7.12□□□□□ -1.27
SOX2-OT-218ENST00000498731 HDGFL2Q7Z4V5 671 aaPredicted RBP7.12□□□□□ -1.27
SOX2-OT-218ENST00000498731 SPOCK2Q92563 424 aa7.12□□□□□ -1.27
SOX2-OT-218ENST00000498731 SIRT1Q96EB6 747 aa7.12□□□□□ -1.27
SOX2-OT-218ENST00000498731 FAM117AQ9C073 453 aa7.12□□□□□ -1.27
SOX2-OT-218ENST00000498731 ZKSCAN5Q9Y2L8 839 aa7.12□□□□□ -1.27
SOX2-OT-218ENST00000498731 INO80Q9ULG1 1556 aaPredicted RBP7.12□□□□□ -1.27
SOX2-OT-218ENST00000498731 ZNF662Q6ZS27 426 aa7.12□□□□□ -1.27
SOX2-OT-218ENST00000498731 TRPM2O94759 1503 aa7.12□□□□□ -1.27
SOX2-OT-218ENST00000498731 TNRQ92752 1358 aa7.12□□□□□ -1.27
SOX2-OT-218ENST00000498731 HDGFP51858 240 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms