RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 EN1Q05925 392 aaPredicted RBP8.76□□□□□ -1.01
SPTA1-209ENST00000498708 SEPT12Q8IYM1 358 aa8.76□□□□□ -1.01
SPTA1-209ENST00000498708 PIK3R4Q99570 1358 aa8.75□□□□□ -1.01
SPTA1-209ENST00000498708 SPHKAPQ2M3C7 1700 aa8.75□□□□□ -1.01
SPTA1-209ENST00000498708 PSEN2P49810 448 aa8.75□□□□□ -1.01
SPTA1-209ENST00000498708 HDGFP51858 240 aaKnown RBP8.75□□□□□ -1.01
SPTA1-209ENST00000498708 ZNF454Q8N9F8 522 aa8.75□□□□□ -1.01
SPTA1-209ENST00000498708 BBXQ8WY36 941 aaPredicted RBP8.75□□□□□ -1.01
SPTA1-209ENST00000498708 ORAI2Q96SN7 254 aa8.75□□□□□ -1.01
SPTA1-209ENST00000498708 KCNK17Q96T54 332 aa8.75□□□□□ -1.01
SPTA1-209ENST00000498708 ANO8Q9HCE9 1232 aaPredicted RBP8.75□□□□□ -1.01
SPTA1-209ENST00000498708 RRP7BPQ9NSQ0 103 aa8.75□□□□□ -1.01
SPTA1-209ENST00000498708 TMEM131LA2VDJ0 1609 aa8.75□□□□□ -1.01
SPTA1-209ENST00000498708 LAMC1P11047 1609 aa8.75□□□□□ -1.01
SPTA1-209ENST00000498708 COL22A1Q8NFW1 1626 aaPredicted RBP8.75□□□□□ -1.01
SPTA1-209ENST00000498708 BAG6P46379 1132 aa8.74□□□□□ -1.01
SPTA1-209ENST00000498708 MAP3K9P80192 1104 aa8.74□□□□□ -1.01
SPTA1-209ENST00000498708 AMER1Q5JTC6 1135 aaPredicted RBP8.74□□□□□ -1.01
SPTA1-209ENST00000498708 ZNF784Q8NCA9 323 aaPredicted RBP8.74□□□□□ -1.01
SPTA1-209ENST00000498708 STAC3Q96MF2 364 aa8.74□□□□□ -1.01
SPTA1-209ENST00000498708 MYOM2P54296 1465 aa8.74□□□□□ -1.01
SPTA1-209ENST00000498708 LMTK2Q8IWU2 1503 aa8.74□□□□□ -1.01
SPTA1-209ENST00000498708 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.74□□□□□ -1.01
SPTA1-209ENST00000498708 KANK1Q14678 1352 aa8.73□□□□□ -1.01
SPTA1-209ENST00000498708 KIF15Q9NS87 1388 aa8.73□□□□□ -1.01
SPTA1-209ENST00000498708 C1orf167Q5SNV9 1468 aa8.73□□□□□ -1.01
SPTA1-209ENST00000498708 EVI5O60447 810 aa8.73□□□□□ -1.01
SPTA1-209ENST00000498708 FOSBP53539 338 aa8.73□□□□□ -1.01
SPTA1-209ENST00000498708 C1QTNF8P60827 252 aa8.73□□□□□ -1.01
SPTA1-209ENST00000498708 DMRTA1Q5VZB9 504 aa8.73□□□□□ -1.01
SPTA1-209ENST00000498708 UNC5CLQ8IV45 518 aa8.73□□□□□ -1.01
SPTA1-209ENST00000498708 BCL2L12Q9HB09 334 aa8.73□□□□□ -1.01
SPTA1-209ENST00000498708 XRN1Q8IZH2 1706 aaKnown RBP8.73□□□□□ -1.01
SPTA1-209ENST00000498708 ERBINQ96RT1 1412 aa8.72□□□□□ -1.01
SPTA1-209ENST00000498708 CAMTA1Q9Y6Y1 1673 aa8.72□□□□□ -1.01
SPTA1-209ENST00000498708 NALCNQ8IZF0 1738 aa8.72□□□□□ -1.01
SPTA1-209ENST00000498708 LOC105371045A0A1W2PR82 267 aa8.72□□□□□ -1.01
SPTA1-209ENST00000498708 KRT27Q7Z3Y8 459 aa8.72□□□□□ -1.01
SPTA1-209ENST00000498708 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.72□□□□□ -1.01
SPTA1-209ENST00000498708 HCSTQ9UBK5 93 aa8.72□□□□□ -1.01
SPTA1-209ENST00000498708 ADGRL3Q9HAR2 1447 aa8.71□□□□□ -1.01
SPTA1-209ENST00000498708 HRO43593 1189 aa8.71□□□□□ -1.02
SPTA1-209ENST00000498708 SLIT2O94813 1529 aa8.7□□□□□ -1.02
SPTA1-209ENST00000498708 ONECUT3O60422 494 aaPredicted RBP8.7□□□□□ -1.02
SPTA1-209ENST00000498708 EZH2Q15910 746 aaKnown RBP8.7□□□□□ -1.02
SPTA1-209ENST00000498708 PTPREP23469 700 aa8.69□□□□□ -1.02
SPTA1-209ENST00000498708 FAM182BQ5T319 152 aa8.69□□□□□ -1.02
SPTA1-209ENST00000498708 SLC4A5Q9BY07 1137 aa8.69□□□□□ -1.02
SPTA1-209ENST00000498708 NRXN3Q9Y4C0 1643 aa8.69□□□□□ -1.02
SPTA1-209ENST00000498708 XPCQ01831 940 aaPredicted RBP8.68□□□□□ -1.02
SPTA1-209ENST00000498708 KANK4Q5T7N3 995 aaPredicted RBP8.68□□□□□ -1.02
SPTA1-209ENST00000498708 ZDHHC16Q969W1 377 aa8.68□□□□□ -1.02
SPTA1-209ENST00000498708 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.68□□□□□ -1.02
SPTA1-209ENST00000498708 VPS9D1Q9Y2B5 631 aa8.68□□□□□ -1.02
SPTA1-209ENST00000498708 METP08581 1390 aa8.68□□□□□ -1.02
SPTA1-209ENST00000498708 RGPD1P0DJD0 1748 aa8.67□□□□□ -1.02
SPTA1-209ENST00000498708 VPS72Q15906 364 aa8.67□□□□□ -1.02
SPTA1-209ENST00000498708 EMILIN3Q9NT22 766 aa8.67□□□□□ -1.02
SPTA1-209ENST00000498708 ABCC5O15440 1437 aa8.66□□□□□ -1.02
SPTA1-209ENST00000498708 SPRYD3Q8NCJ5 442 aa8.66□□□□□ -1.02
SPTA1-209ENST00000498708 CAMKK2Q96RR4 588 aa8.66□□□□□ -1.02
SPTA1-209ENST00000498708 PPP1R1BQ9UD71 204 aaPredicted RBP8.66□□□□□ -1.02
SPTA1-209ENST00000498708 CCDC9Q9Y3X0 531 aaKnown RBP8.66□□□□□ -1.02
SPTA1-209ENST00000498708 TNS1Q9HBL0 1735 aaKnown RBP8.66□□□□□ -1.02
SPTA1-209ENST00000498708 PXDNQ92626 1479 aa8.65□□□□□ -1.02
SPTA1-209ENST00000498708 MYOM3Q5VTT5 1437 aa8.65□□□□□ -1.02
SPTA1-209ENST00000498708 CROCC2H7BZ55 1655 aa8.65□□□□□ -1.03
SPTA1-209ENST00000498708 NINLQ9Y2I6 1382 aa8.64□□□□□ -1.03
SPTA1-209ENST00000498708 A0A0G2JS52 829 aa8.64□□□□□ -1.03
SPTA1-209ENST00000498708 FOXO3O43524 673 aa8.64□□□□□ -1.03
SPTA1-209ENST00000498708 MYT1Q01538 1121 aa8.64□□□□□ -1.03
SPTA1-209ENST00000498708 CAMK2BQ13554 666 aa8.64□□□□□ -1.03
SPTA1-209ENST00000498708 FBXW7Q969H0 707 aa8.64□□□□□ -1.03
SPTA1-209ENST00000498708 RPRD2Q5VT52 1461 aaKnown RBP8.64□□□□□ -1.03
SPTA1-209ENST00000498708 DISP2A7MBM2 1401 aa8.63□□□□□ -1.03
SPTA1-209ENST00000498708 VPS8Q8N3P4 1428 aa8.63□□□□□ -1.03
SPTA1-209ENST00000498708 FAM98CQ17RN3 349 aaKnown RBP8.63□□□□□ -1.03
SPTA1-209ENST00000498708 ESCO1Q5FWF5 840 aa8.63□□□□□ -1.03
SPTA1-209ENST00000498708 ADAM33Q9BZ11 813 aa8.63□□□□□ -1.03
SPTA1-209ENST00000498708 CHIC2Q9UKJ5 165 aa8.63□□□□□ -1.03
SPTA1-209ENST00000498708 PLCH1Q4KWH8 1693 aa8.62□□□□□ -1.03
SPTA1-209ENST00000498708 PTPN23Q9H3S7 1636 aa8.62□□□□□ -1.03
SPTA1-209ENST00000498708 NPHP3Q7Z494 1330 aa8.62□□□□□ -1.03
SPTA1-209ENST00000498708 KCNQ2O43526 872 aa8.62□□□□□ -1.03
SPTA1-209ENST00000498708 KCTD12Q96CX2 325 aaKnown RBP8.62□□□□□ -1.03
SPTA1-209ENST00000498708 ZBED2Q9BTP6 218 aa8.62□□□□□ -1.03
SPTA1-209ENST00000498708 SPON1Q9HCB6 807 aa8.62□□□□□ -1.03
SPTA1-209ENST00000498708 CHD4Q14839 1912 aa8.62□□□□□ -1.03
SPTA1-209ENST00000498708 USP32Q8NFA0 1604 aa8.62□□□□□ -1.03
SPTA1-209ENST00000498708 PHF14O94880 888 aa8.61□□□□□ -1.03
SPTA1-209ENST00000498708 TYW1BQ6NUM6 668 aa8.61□□□□□ -1.03
SPTA1-209ENST00000498708 CABLES1Q8TDN4 633 aa8.61□□□□□ -1.03
SPTA1-209ENST00000498708 RTN4Q9NQC3 1192 aaKnown RBP8.61□□□□□ -1.03
SPTA1-209ENST00000498708 PCDHGA10Q9Y5H3 936 aa8.61□□□□□ -1.03
SPTA1-209ENST00000498708 NUP188Q5SRE5 1749 aa8.6□□□□□ -1.03
SPTA1-209ENST00000498708 NWD2Q9ULI1 1742 aa8.6□□□□□ -1.03
SPTA1-209ENST00000498708 ADGRL2O95490 1459 aa8.6□□□□□ -1.03
SPTA1-209ENST00000498708 TRIM37O94972 964 aa8.6□□□□□ -1.03
SPTA1-209ENST00000498708 NBPF3Q9H094 633 aa8.6□□□□□ -1.03
SPTA1-209ENST00000498708 ROBO2Q9HCK4 1378 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms