RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 C11orf95C9JLR9 678 aaPredicted RBP26.39■■□□□ 1.82
ECM1-207ENST00000498579 TMF1P82094 1093 aa26.39■■□□□ 1.82
ECM1-207ENST00000498579 WDR17Q8IZU2 1322 aa26.39■■□□□ 1.81
ECM1-207ENST00000498579 A0A1W2PP64 1363 aa26.38■■□□□ 1.81
ECM1-207ENST00000498579 FAM182BQ5T319 152 aa26.38■■□□□ 1.81
ECM1-207ENST00000498579 MON2Q7Z3U7 1717 aa26.37■■□□□ 1.81
ECM1-207ENST00000498579 ABCC6O95255 1503 aa26.36■■□□□ 1.81
ECM1-207ENST00000498579 CDCA8Q53HL2 280 aa26.36■■□□□ 1.81
ECM1-207ENST00000498579 NME9Q86XW9 330 aa26.36■■□□□ 1.81
ECM1-207ENST00000498579 CDCA7Q9BWT1 371 aaPredicted RBP26.36■■□□□ 1.81
ECM1-207ENST00000498579 AXIN2Q9Y2T1 843 aa26.36■■□□□ 1.81
ECM1-207ENST00000498579 NFAT5O94916 1531 aa26.35■■□□□ 1.81
ECM1-207ENST00000498579 DISP2A7MBM2 1401 aa26.35■■□□□ 1.81
ECM1-207ENST00000498579 CSB-PGBD3P0DP91 1061 aa26.35■■□□□ 1.81
ECM1-207ENST00000498579 CARD10Q9BWT7 1032 aa26.31■■□□□ 1.8
ECM1-207ENST00000498579 ANKRD36BQ8N2N9 1353 aa26.31■■□□□ 1.8
ECM1-207ENST00000498579 TRIM37O94972 964 aa26.3■■□□□ 1.8
ECM1-207ENST00000498579 DDB1Q16531 1140 aa26.3■■□□□ 1.8
ECM1-207ENST00000498579 RGPD1P0DJD0 1748 aa26.29■■□□□ 1.8
ECM1-207ENST00000498579 COL18A1P39060 1754 aa26.29■■□□□ 1.8
ECM1-207ENST00000498579 CCDC7Q96M83 1385 aa26.29■■□□□ 1.8
ECM1-207ENST00000498579 USP54Q70EL1 1684 aa26.28■■□□□ 1.8
ECM1-207ENST00000498579 EN1Q05925 392 aaPredicted RBP26.28■■□□□ 1.8
ECM1-207ENST00000498579 OVOS2A0A0J9YW53 1432 aa26.28■■□□□ 1.8
ECM1-207ENST00000498579 OVOS2Q6IE36 1432 aa26.28■■□□□ 1.8
ECM1-207ENST00000498579 COG3Q96JB2 828 aa26.27■■□□□ 1.8
ECM1-207ENST00000498579 PARD3Q8TEW0 1356 aa26.27■■□□□ 1.8
ECM1-207ENST00000498579 OVOS2A0A0G2JMS6 1433 aa26.26■■□□□ 1.79
ECM1-207ENST00000498579 ERBB3P21860 1342 aa26.25■■□□□ 1.79
ECM1-207ENST00000498579 APBA3O96018 575 aa26.25■■□□□ 1.79
ECM1-207ENST00000498579 PARP4Q9UKK3 1724 aaKnown RBP26.25■■□□□ 1.79
ECM1-207ENST00000498579 CCER1Q8TC90 406 aaPredicted RBP26.24■■□□□ 1.79
ECM1-207ENST00000498579 CAMKK2Q96RR4 588 aa26.21■■□□□ 1.79
ECM1-207ENST00000498579 EXOC5O00471 708 aa26.19■■□□□ 1.78
ECM1-207ENST00000498579 EZH2Q15910 746 aaKnown RBP26.19■■□□□ 1.78
ECM1-207ENST00000498579 ANKRD24Q8TF21 1146 aa26.19■■□□□ 1.78
ECM1-207ENST00000498579 NLRP2Q9NX02 1062 aa26.19■■□□□ 1.78
ECM1-207ENST00000498579 BCL9O00512 1426 aa26.18■■□□□ 1.78
ECM1-207ENST00000498579 IP6K1Q92551 441 aa26.18■■□□□ 1.78
ECM1-207ENST00000498579 TNS1Q9HBL0 1735 aaKnown RBP26.18■■□□□ 1.78
ECM1-207ENST00000498579 SRCAPQ6ZRS2 3230 aa26.18■■□□□ 1.78
ECM1-207ENST00000498579 LRRC37A3O60309 1634 aa26.17■■□□□ 1.78
ECM1-207ENST00000498579 IL2RBP14784 551 aa26.14■■□□□ 1.78
ECM1-207ENST00000498579 MARCH10Q8NA82 808 aaPredicted RBP26.14■■□□□ 1.78
ECM1-207ENST00000498579 TNS2Q63HR2 1409 aa26.14■■□□□ 1.77
ECM1-207ENST00000498579 FYB1O15117 783 aa26.13■■□□□ 1.77
ECM1-207ENST00000498579 AMPHP49418 695 aa26.13■■□□□ 1.77
ECM1-207ENST00000498579 BCL11BQ9C0K0 894 aaPredicted RBP26.13■■□□□ 1.77
ECM1-207ENST00000498579 MAP3K19Q56UN5 1328 aa26.12■■□□□ 1.77
ECM1-207ENST00000498579 RTL1A6NKG5 1358 aa26.11■■□□□ 1.77
ECM1-207ENST00000498579 PSDA5PKW4 1024 aaPredicted RBP26.11■■□□□ 1.77
ECM1-207ENST00000498579 NBPF14Q5TI25 921 aa26.11■■□□□ 1.77
ECM1-207ENST00000498579 EIF4G2P78344 907 aaKnown RBP eCLIP26.1■■□□□ 1.77
ECM1-207ENST00000498579 GGNBP2Q9H3C7 697 aa26.1■■□□□ 1.77
ECM1-207ENST00000498579 PEAK1Q9H792 1746 aa26.09■■□□□ 1.77
ECM1-207ENST00000498579 PLSCR1O15162 318 aa26.09■■□□□ 1.77
ECM1-207ENST00000498579 HOXC9P31274 260 aa26.09■■□□□ 1.77
ECM1-207ENST00000498579 WNK3Q9BYP7 1800 aa26.09■■□□□ 1.77
ECM1-207ENST00000498579 LTN1O94822 1766 aa26.08■■□□□ 1.77
ECM1-207ENST00000498579 RGPD5Q99666 1765 aa26.08■■□□□ 1.77
ECM1-207ENST00000498579 R3HDM1Q15032 1099 aaKnown RBP26.08■■□□□ 1.77
ECM1-207ENST00000498579 LTV1Q96GA3 475 aaPredicted RBP26.06■■□□□ 1.76
ECM1-207ENST00000498579 KIF24Q5T7B8 1368 aa26.04■■□□□ 1.76
ECM1-207ENST00000498579 SMG6Q86US8 1419 aaKnown RBP26.04■■□□□ 1.76
ECM1-207ENST00000498579 NSD3Q9BZ95 1437 aa26.04■■□□□ 1.76
ECM1-207ENST00000498579 RRS1Q15050 365 aaKnown RBP26.03■■□□□ 1.76
ECM1-207ENST00000498579 CARD14Q9BXL6 1004 aa26.02■■□□□ 1.76
ECM1-207ENST00000498579 FBLN1P23142 703 aa26.01■■□□□ 1.75
ECM1-207ENST00000498579 CGNL1Q0VF96 1302 aa26.01■■□□□ 1.75
ECM1-207ENST00000498579 FAM208AQ9UK61 1670 aaKnown RBP26■■□□□ 1.75
ECM1-207ENST00000498579 HSPA5P11021 654 aaKnown RBP25.99■■□□□ 1.75
ECM1-207ENST00000498579 POLR3GLQ9BT43 218 aa25.99■■□□□ 1.75
ECM1-207ENST00000498579 RREB1Q92766 1687 aa25.99■■□□□ 1.75
ECM1-207ENST00000498579 LRP5O75197 1615 aa25.99■■□□□ 1.75
ECM1-207ENST00000498579 FLT4P35916 1363 aa25.98■■□□□ 1.75
ECM1-207ENST00000498579 RGPD3A6NKT7 1758 aaPredicted RBP25.97■■□□□ 1.75
ECM1-207ENST00000498579 RGPD4Q7Z3J3 1758 aa25.97■■□□□ 1.75
ECM1-207ENST00000498579 INSRP06213 1382 aa25.96■■□□□ 1.75
ECM1-207ENST00000498579 PTF1AQ7RTS3 328 aa25.96■■□□□ 1.75
ECM1-207ENST00000498579 MYOM1P52179 1685 aa25.96■■□□□ 1.75
ECM1-207ENST00000498579 ACSBG1Q96GR2 724 aa25.93■■□□□ 1.74
ECM1-207ENST00000498579 NUP188Q5SRE5 1749 aa25.93■■□□□ 1.74
ECM1-207ENST00000498579 KCNQ2O43526 872 aa25.92■■□□□ 1.74
ECM1-207ENST00000498579 DDX54Q8TDD1 881 aaKnown RBP25.92■■□□□ 1.74
ECM1-207ENST00000498579 RAPGEF4Q8WZA2 1011 aa25.92■■□□□ 1.74
ECM1-207ENST00000498579 SBF2Q86WG5 1849 aa25.92■■□□□ 1.74
ECM1-207ENST00000498579 KIF20BQ96Q89 1820 aa25.91■■□□□ 1.74
ECM1-207ENST00000498579 TXNRD1Q16881 649 aa25.91■■□□□ 1.74
ECM1-207ENST00000498579 HSP90AB2PQ58FF8 381 aa25.91■■□□□ 1.74
ECM1-207ENST00000498579 NBPF6Q5VWK0 638 aa25.91■■□□□ 1.74
ECM1-207ENST00000498579 ZCRB1Q8TBF4 217 aaKnown RBP25.91■■□□□ 1.74
ECM1-207ENST00000498579 NBPF4Q96M43 638 aa25.91■■□□□ 1.74
ECM1-207ENST00000498579 PROM2Q8N271 834 aa25.88■■□□□ 1.73
ECM1-207ENST00000498579 NHSQ6T4R5 1651 aa25.87■■□□□ 1.73
ECM1-207ENST00000498579 TATP17735 454 aaPredicted RBP25.87■■□□□ 1.73
ECM1-207ENST00000498579 EMILIN1Q9Y6C2 1016 aa25.87■■□□□ 1.73
ECM1-207ENST00000498579 PPM1GO15355 546 aaPredicted RBP25.86■■□□□ 1.73
ECM1-207ENST00000498579 PANK3Q9H999 370 aa25.86■■□□□ 1.73
ECM1-207ENST00000498579 STK32BQ9NY57 414 aa25.86■■□□□ 1.73
ECM1-207ENST00000498579 MEGF6O75095 1541 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms