RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 DDB1Q16531 1140 aa17.16■□□□□ 0.34
CNOT4-211ENST00000498534 TTC21BQ7Z4L5 1316 aa17.16■□□□□ 0.34
CNOT4-211ENST00000498534 CDCA7Q9BWT1 371 aaPredicted RBP17.14■□□□□ 0.33
CNOT4-211ENST00000498534 TTC21AQ8NDW8 1320 aa17.14■□□□□ 0.33
CNOT4-211ENST00000498534 SOX12O15370 315 aa17.13■□□□□ 0.33
CNOT4-211ENST00000498534 CSB-PGBD3P0DP91 1061 aa17.13■□□□□ 0.33
CNOT4-211ENST00000498534 ARHGEF25Q86VW2 580 aa17.13■□□□□ 0.33
CNOT4-211ENST00000498534 AXIN2Q9Y2T1 843 aa17.13■□□□□ 0.33
CNOT4-211ENST00000498534 WDR17Q8IZU2 1322 aa17.13■□□□□ 0.33
CNOT4-211ENST00000498534 TRPM1Q7Z4N2 1603 aa17.13■□□□□ 0.33
CNOT4-211ENST00000498534 SLIT3O75094 1523 aa17.12■□□□□ 0.33
CNOT4-211ENST00000498534 C1QBPQ07021 282 aaKnown RBP17.12■□□□□ 0.33
CNOT4-211ENST00000498534 KTN1Q86UP2 1357 aaKnown RBP17.11■□□□□ 0.33
CNOT4-211ENST00000498534 OVOS2A0A0G2JMS6 1433 aa17.11■□□□□ 0.33
CNOT4-211ENST00000498534 OVOS2A0A0J9YW53 1432 aa17.11■□□□□ 0.33
CNOT4-211ENST00000498534 OVOS2Q6IE36 1432 aa17.11■□□□□ 0.33
CNOT4-211ENST00000498534 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
CNOT4-211ENST00000498534 PLSCR1O15162 318 aa17.1■□□□□ 0.33
CNOT4-211ENST00000498534 CARD10Q9BWT7 1032 aa17.1■□□□□ 0.33
CNOT4-211ENST00000498534 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
CNOT4-211ENST00000498534 EXOC5O00471 708 aa17.09■□□□□ 0.33
CNOT4-211ENST00000498534 CARD11Q9BXL7 1154 aa17.09■□□□□ 0.33
CNOT4-211ENST00000498534 PIK3C2AO00443 1686 aa17.08■□□□□ 0.32
CNOT4-211ENST00000498534 CPSF1Q10570 1443 aaKnown RBP17.08■□□□□ 0.32
CNOT4-211ENST00000498534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.327e-7■■■■□ 23.2
CNOT4-211ENST00000498534 TMC1Q8TDI8 760 aa17.07■□□□□ 0.32
CNOT4-211ENST00000498534 SPON1Q9HCB6 807 aa17.07■□□□□ 0.32
CNOT4-211ENST00000498534 MARCH10Q8NA82 808 aaPredicted RBP17.06■□□□□ 0.32
CNOT4-211ENST00000498534 PPP1R1BQ9UD71 204 aaPredicted RBP17.06■□□□□ 0.32
CNOT4-211ENST00000498534 COL18A1P39060 1754 aa17.06■□□□□ 0.32
CNOT4-211ENST00000498534 HDGFL2Q7Z4V5 671 aaPredicted RBP17.05■□□□□ 0.32
CNOT4-211ENST00000498534 AKAP12Q02952 1782 aa17.05■□□□□ 0.32
CNOT4-211ENST00000498534 SBNO2Q9Y2G9 1366 aa17.04■□□□□ 0.32
CNOT4-211ENST00000498534 RREB1Q92766 1687 aa17.04■□□□□ 0.32
CNOT4-211ENST00000498534 KCNQ2O43526 872 aa17.04■□□□□ 0.32
CNOT4-211ENST00000498534 CCDC7Q96M83 1385 aa17.03■□□□□ 0.32
CNOT4-211ENST00000498534 TERF2IPQ9NYB0 399 aa17.03■□□□□ 0.32
CNOT4-211ENST00000498534 NUP188Q5SRE5 1749 aa17.03■□□□□ 0.32
CNOT4-211ENST00000498534 PTF1AQ7RTS3 328 aa17.02■□□□□ 0.32
CNOT4-211ENST00000498534 SLC12A5Q9H2X9 1139 aa17.02■□□□□ 0.32
CNOT4-211ENST00000498534 USP31Q70CQ4 1352 aa17.02■□□□□ 0.31
CNOT4-211ENST00000498534 PEAK1Q9H792 1746 aa17.01■□□□□ 0.31
CNOT4-211ENST00000498534 LRRC37A3O60309 1634 aa17.01■□□□□ 0.31
CNOT4-211ENST00000498534 NME9Q86XW9 330 aa17.01■□□□□ 0.31
CNOT4-211ENST00000498534 NLRP2Q9NX02 1062 aa17.01■□□□□ 0.31
CNOT4-211ENST00000498534 RGPD5Q99666 1765 aa17.01■□□□□ 0.31
CNOT4-211ENST00000498534 BCL9O00512 1426 aa17.01■□□□□ 0.31
CNOT4-211ENST00000498534 TONSLQ96HA7 1378 aa17.01■□□□□ 0.31
CNOT4-211ENST00000498534 SBF2Q86WG5 1849 aa17■□□□□ 0.31
CNOT4-211ENST00000498534 PUS7Q96PZ0 661 aaKnown RBP17■□□□□ 0.31
CNOT4-211ENST00000498534 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
CNOT4-211ENST00000498534 PROM2Q8N271 834 aa16.99■□□□□ 0.31
CNOT4-211ENST00000498534 NFAT5O94916 1531 aa16.99■□□□□ 0.31
CNOT4-211ENST00000498534 IL2RBP14784 551 aa16.97■□□□□ 0.31
CNOT4-211ENST00000498534 TXNRD1Q16881 649 aa16.97■□□□□ 0.31
CNOT4-211ENST00000498534 STK32BQ9NY57 414 aa16.97■□□□□ 0.31
CNOT4-211ENST00000498534 ERBB3P21860 1342 aa16.96■□□□□ 0.31
CNOT4-211ENST00000498534 ABCC6O95255 1503 aa16.96■□□□□ 0.31
CNOT4-211ENST00000498534 MON2Q7Z3U7 1717 aa16.96■□□□□ 0.31
CNOT4-211ENST00000498534 ANKRD24Q8TF21 1146 aa16.96■□□□□ 0.31
CNOT4-211ENST00000498534 ANO8Q9HCE9 1232 aaPredicted RBP16.96■□□□□ 0.31
CNOT4-211ENST00000498534 RGPD3A6NKT7 1758 aaPredicted RBP16.96■□□□□ 0.31
CNOT4-211ENST00000498534 RGPD4Q7Z3J3 1758 aa16.96■□□□□ 0.31
CNOT4-211ENST00000498534 EDC4Q6P2E9 1401 aaKnown RBP16.96■□□□□ 0.3
CNOT4-211ENST00000498534 WNK3Q9BYP7 1800 aa16.95■□□□□ 0.3
CNOT4-211ENST00000498534 CD163L1Q9NR16 1453 aa16.94■□□□□ 0.3
CNOT4-211ENST00000498534 ACSBG1Q96GR2 724 aa16.94■□□□□ 0.3
CNOT4-211ENST00000498534 NINLQ9Y2I6 1382 aa16.93■□□□□ 0.3
CNOT4-211ENST00000498534 SLC4A2P04920 1241 aa16.93■□□□□ 0.3
CNOT4-211ENST00000498534 SLC15A2Q16348 729 aa16.93■□□□□ 0.3
CNOT4-211ENST00000498534 IP6K1Q92551 441 aa16.93■□□□□ 0.3
CNOT4-211ENST00000498534 TNS2Q63HR2 1409 aa16.93■□□□□ 0.3
CNOT4-211ENST00000498534 ST20-MTHFSA0A0A6YYL1 179 aa16.92■□□□□ 0.3
CNOT4-211ENST00000498534 ZBTB7AO95365 584 aa16.92■□□□□ 0.3
CNOT4-211ENST00000498534 YY1P25490 414 aa16.92■□□□□ 0.3
CNOT4-211ENST00000498534 COG3Q96JB2 828 aa16.92■□□□□ 0.3
CNOT4-211ENST00000498534 A0A1W2PP64 1363 aa16.91■□□□□ 0.3
CNOT4-211ENST00000498534 PDGFDQ9GZP0 370 aaPredicted RBP16.91■□□□□ 0.3
CNOT4-211ENST00000498534 ATF5Q9Y2D1 282 aaPredicted RBP16.91■□□□□ 0.3
CNOT4-211ENST00000498534 KAT6BQ8WYB5 2073 aa16.91■□□□□ 0.3
CNOT4-211ENST00000498534 LTV1Q96GA3 475 aaPredicted RBP16.9■□□□□ 0.3
CNOT4-211ENST00000498534 LTN1O94822 1766 aa16.89■□□□□ 0.3
CNOT4-211ENST00000498534 USP54Q70EL1 1684 aa16.89■□□□□ 0.29
CNOT4-211ENST00000498534 DDX54Q8TDD1 881 aaKnown RBP16.89■□□□□ 0.29
CNOT4-211ENST00000498534 TESK2Q96S53 571 aa16.89■□□□□ 0.29
CNOT4-211ENST00000498534 AMPHP49418 695 aa16.88■□□□□ 0.29
CNOT4-211ENST00000498534 MTFR1LQ9H019 292 aa16.87■□□□□ 0.29
CNOT4-211ENST00000498534 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
CNOT4-211ENST00000498534 PTGER2P43116 358 aa16.86■□□□□ 0.29
CNOT4-211ENST00000498534 CASZ1Q86V15 1759 aa16.85■□□□□ 0.29
CNOT4-211ENST00000498534 TMF1P82094 1093 aa16.85■□□□□ 0.29
CNOT4-211ENST00000498534 HOXC9P31274 260 aa16.84■□□□□ 0.29
CNOT4-211ENST00000498534 MAP3K19Q56UN5 1328 aa16.84■□□□□ 0.29
CNOT4-211ENST00000498534 NHSQ6T4R5 1651 aa16.84■□□□□ 0.29
CNOT4-211ENST00000498534 SLC27A3Q5K4L6 730 aa16.83■□□□□ 0.28
CNOT4-211ENST00000498534 SYTL4Q96C24 671 aaPredicted RBP16.83■□□□□ 0.28
CNOT4-211ENST00000498534 FBLN1P23142 703 aa16.82■□□□□ 0.28
CNOT4-211ENST00000498534 TRIM26Q12899 539 aaPredicted RBP16.82■□□□□ 0.28
CNOT4-211ENST00000498534 CDCA8Q53HL2 280 aa16.82■□□□□ 0.28
CNOT4-211ENST00000498534 ZCRB1Q8TBF4 217 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms