RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 CPSF1Q10570 1443 aaKnown RBP13.87□□□□□ -0.19
TSPAN1-209ENST00000498443 SSH2Q76I76 1423 aa13.87□□□□□ -0.19
TSPAN1-209ENST00000498443 TTC21BQ7Z4L5 1316 aa13.87□□□□□ -0.19
TSPAN1-209ENST00000498443 PARD3Q8TEW0 1356 aa13.86□□□□□ -0.19
TSPAN1-209ENST00000498443 ALS2Q96Q42 1657 aa13.86□□□□□ -0.19
TSPAN1-209ENST00000498443 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
TSPAN1-209ENST00000498443 SPATA31A1Q5TZJ5 1347 aa13.86□□□□□ -0.19
TSPAN1-209ENST00000498443 A0A1W2PP64 1363 aa13.85□□□□□ -0.19
TSPAN1-209ENST00000498443 KTN1Q86UP2 1357 aaKnown RBP13.85□□□□□ -0.19
TSPAN1-209ENST00000498443 NINLQ9Y2I6 1382 aa13.85□□□□□ -0.19
TSPAN1-209ENST00000498443 EVA1CP58658 441 aa13.85□□□□□ -0.19
TSPAN1-209ENST00000498443 ZNF784Q8NCA9 323 aaPredicted RBP13.85□□□□□ -0.19
TSPAN1-209ENST00000498443 ZBTB7CA1YPR0 619 aa13.84□□□□□ -0.19
TSPAN1-209ENST00000498443 NLRP6P59044 892 aa13.84□□□□□ -0.19
TSPAN1-209ENST00000498443 KIAA0232Q92628 1395 aa13.83□□□□□ -0.19
TSPAN1-209ENST00000498443 AKAP12Q02952 1782 aa13.82□□□□□ -0.2
TSPAN1-209ENST00000498443 NRKQ7Z2Y5 1582 aa13.81□□□□□ -0.2
TSPAN1-209ENST00000498443 ZBTB7AO95365 584 aa13.81□□□□□ -0.2
TSPAN1-209ENST00000498443 ZNF692Q9BU19 519 aaPredicted RBP13.81□□□□□ -0.2
TSPAN1-209ENST00000498443 PIK3C2AO00443 1686 aa13.8□□□□□ -0.2
TSPAN1-209ENST00000498443 HDGFL2Q7Z4V5 671 aaPredicted RBP13.8□□□□□ -0.2
TSPAN1-209ENST00000498443 PUS7Q96PZ0 661 aaKnown RBP13.8□□□□□ -0.2
TSPAN1-209ENST00000498443 CRYBG1Q9Y4K1 1723 aa13.8□□□□□ -0.2
TSPAN1-209ENST00000498443 KIF7Q2M1P5 1343 aa13.8□□□□□ -0.2
TSPAN1-209ENST00000498443 GCP02774 474 aa13.79□□□□□ -0.2
TSPAN1-209ENST00000498443 IFFO2Q5TF58 517 aa13.79□□□□□ -0.2
TSPAN1-209ENST00000498443 GGNBP2Q9H3C7 697 aa13.79□□□□□ -0.2
TSPAN1-209ENST00000498443 ATF5Q9Y2D1 282 aaPredicted RBP13.79□□□□□ -0.2
TSPAN1-209ENST00000498443 MYOM1P52179 1685 aa13.79□□□□□ -0.2
TSPAN1-209ENST00000498443 LARP1Q6PKG0 1096 aaKnown RBP13.78□□□□□ -0.2
TSPAN1-209ENST00000498443 NLRP13Q86W25 1043 aa13.78□□□□□ -0.2
TSPAN1-209ENST00000498443 PDGFDQ9GZP0 370 aaPredicted RBP13.78□□□□□ -0.2
TSPAN1-209ENST00000498443 PANK3Q9H999 370 aa13.78□□□□□ -0.2
TSPAN1-209ENST00000498443 TERF2IPQ9NYB0 399 aa13.78□□□□□ -0.2
TSPAN1-209ENST00000498443 USP19O94966 1318 aa13.78□□□□□ -0.2
TSPAN1-209ENST00000498443 MON2Q7Z3U7 1717 aa13.78□□□□□ -0.2
TSPAN1-209ENST00000498443 FYB1O15117 783 aa13.77□□□□□ -0.21
TSPAN1-209ENST00000498443 C1QTNF8P60827 252 aa13.77□□□□□ -0.21
TSPAN1-209ENST00000498443 CNGB1Q14028 1251 aaPredicted RBP13.77□□□□□ -0.21
TSPAN1-209ENST00000498443 WASHC2AQ641Q2 1341 aa13.77□□□□□ -0.21
TSPAN1-209ENST00000498443 BCL11BQ9C0K0 894 aaPredicted RBP13.77□□□□□ -0.21
TSPAN1-209ENST00000498443 ANO8Q9HCE9 1232 aaPredicted RBP13.77□□□□□ -0.21
TSPAN1-209ENST00000498443 PHRF1Q9P1Y6 1649 aaKnown RBP13.77□□□□□ -0.21
TSPAN1-209ENST00000498443 AXIN2Q9Y2T1 843 aa13.77□□□□□ -0.21
TSPAN1-209ENST00000498443 ANKRD36BQ8N2N9 1353 aa13.76□□□□□ -0.21
TSPAN1-209ENST00000498443 TCP11L2Q8N4U5 519 aa13.76□□□□□ -0.21
TSPAN1-209ENST00000498443 BARGINQ6ZT62 677 aa13.75□□□□□ -0.21
TSPAN1-209ENST00000498443 EDC4Q6P2E9 1401 aaKnown RBP13.74□□□□□ -0.21
TSPAN1-209ENST00000498443 NSD3Q9BZ95 1437 aa13.74□□□□□ -0.21
TSPAN1-209ENST00000498443 TTC21AQ8NDW8 1320 aa13.74□□□□□ -0.21
TSPAN1-209ENST00000498443 FHDC1Q9C0D6 1143 aaPredicted RBP13.74□□□□□ -0.21
TSPAN1-209ENST00000498443 UTRNP46939 3433 aa13.74□□□□□ -0.21
TSPAN1-209ENST00000498443 CDCA8Q53HL2 280 aa13.73□□□□□ -0.21
TSPAN1-209ENST00000498443 CASZ1Q86V15 1759 aa13.73□□□□□ -0.21
TSPAN1-209ENST00000498443 CCDC7Q96M83 1385 aa13.72□□□□□ -0.21
TSPAN1-209ENST00000498443 NEFLP07196 543 aa13.72□□□□□ -0.21
TSPAN1-209ENST00000498443 ARHGEF25Q86VW2 580 aa13.72□□□□□ -0.21
TSPAN1-209ENST00000498443 USP31Q70CQ4 1352 aa13.71□□□□□ -0.21
TSPAN1-209ENST00000498443 SLIT3O75094 1523 aa13.71□□□□□ -0.21
TSPAN1-209ENST00000498443 SLC24A1O60721 1099 aa13.71□□□□□ -0.21
TSPAN1-209ENST00000498443 TNNT2P45379 298 aaPredicted RBP13.71□□□□□ -0.21
TSPAN1-209ENST00000498443 RRS1Q15050 365 aaKnown RBP13.71□□□□□ -0.21
TSPAN1-209ENST00000498443 PTF1AQ7RTS3 328 aa13.71□□□□□ -0.21
TSPAN1-209ENST00000498443 KLHL34Q8N239 644 aa13.71□□□□□ -0.21
TSPAN1-209ENST00000498443 SYT17Q9BSW7 474 aa13.71□□□□□ -0.21
TSPAN1-209ENST00000498443 PTGER2P43116 358 aa13.7□□□□□ -0.22
TSPAN1-209ENST00000498443 OVOS2A0A0G2JMS6 1433 aa13.7□□□□□ -0.22
TSPAN1-209ENST00000498443 OVOS2A0A0J9YW53 1432 aa13.7□□□□□ -0.22
TSPAN1-209ENST00000498443 OVOS2Q6IE36 1432 aa13.7□□□□□ -0.22
TSPAN1-209ENST00000498443 CHD4Q14839 1912 aa13.7□□□□□ -0.22
TSPAN1-209ENST00000498443 BRD4O60885 1362 aaPredicted RBP13.7□□□□□ -0.22
TSPAN1-209ENST00000498443 NFAT5O94916 1531 aa13.69□□□□□ -0.22
TSPAN1-209ENST00000498443 GIGYF1O75420 1035 aaPredicted RBP13.69□□□□□ -0.22
TSPAN1-209ENST00000498443 STK32BQ9NY57 414 aa13.69□□□□□ -0.22
TSPAN1-209ENST00000498443 SUPT16HQ9Y5B9 1047 aaKnown RBP13.69□□□□□ -0.22
TSPAN1-209ENST00000498443 RGPD5Q99666 1765 aa13.68□□□□□ -0.22
TSPAN1-209ENST00000498443 PARP4Q9UKK3 1724 aaKnown RBP13.68□□□□□ -0.22
TSPAN1-209ENST00000498443 LTV1Q96GA3 475 aaPredicted RBP13.68□□□□□ -0.22
TSPAN1-209ENST00000498443 COG3Q96JB2 828 aa13.68□□□□□ -0.22
TSPAN1-209ENST00000498443 COL18A1P39060 1754 aa13.68□□□□□ -0.22
TSPAN1-209ENST00000498443 MAP3K19Q56UN5 1328 aa13.67□□□□□ -0.22
TSPAN1-209ENST00000498443 SBF2Q86WG5 1849 aa13.67□□□□□ -0.22
TSPAN1-209ENST00000498443 PER1O15534 1290 aaPredicted RBP13.67□□□□□ -0.22
TSPAN1-209ENST00000498443 DDB1Q16531 1140 aa13.67□□□□□ -0.22
TSPAN1-209ENST00000498443 GPR162Q16538 588 aa13.67□□□□□ -0.22
TSPAN1-209ENST00000498443 THRAP3Q9Y2W1 955 aaKnown RBP13.67□□□□□ -0.22
TSPAN1-209ENST00000498443 CPDO75976 1380 aa13.67□□□□□ -0.22
TSPAN1-209ENST00000498443 PLSCR1O15162 318 aa13.66□□□□□ -0.22
TSPAN1-209ENST00000498443 EMILIN1Q9Y6C2 1016 aa13.66□□□□□ -0.22
TSPAN1-209ENST00000498443 LMO7Q8WWI1 1683 aa13.66□□□□□ -0.22
TSPAN1-209ENST00000498443 RGPD3A6NKT7 1758 aaPredicted RBP13.66□□□□□ -0.22
TSPAN1-209ENST00000498443 RGPD4Q7Z3J3 1758 aa13.66□□□□□ -0.22
TSPAN1-209ENST00000498443 LRRC37A3O60309 1634 aa13.65□□□□□ -0.22
TSPAN1-209ENST00000498443 CC2D1BQ5T0F9 858 aaKnown RBP13.65□□□□□ -0.22
TSPAN1-209ENST00000498443 TOM1L2Q6ZVM7 507 aa13.65□□□□□ -0.22
TSPAN1-209ENST00000498443 PROM2Q8N271 834 aa13.65□□□□□ -0.22
TSPAN1-209ENST00000498443 KCNH5Q8NCM2 988 aa13.65□□□□□ -0.22
TSPAN1-209ENST00000498443 PEAK1Q9H792 1746 aa13.64□□□□□ -0.23
TSPAN1-209ENST00000498443 COL5A2P05997 1499 aaPredicted RBP13.64□□□□□ -0.23
TSPAN1-209ENST00000498443 AATKQ6ZMQ8 1374 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms