RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 KCNQ2O43526 872 aa23.18■■□□□ 1.3
MUC1-220ENST00000498431 SPON1Q9HCB6 807 aa23.18■■□□□ 1.3
MUC1-220ENST00000498431 TRPM1Q7Z4N2 1603 aa23.18■■□□□ 1.3
MUC1-220ENST00000498431 WDR17Q8IZU2 1322 aa23.17■■□□□ 1.3
MUC1-220ENST00000498431 MARCH10Q8NA82 808 aaPredicted RBP23.17■■□□□ 1.3
MUC1-220ENST00000498431 EVC2Q86UK5 1308 aa23.16■■□□□ 1.3
MUC1-220ENST00000498431 PLSCR1O15162 318 aa23.16■■□□□ 1.3
MUC1-220ENST00000498431 PPP1R1BQ9UD71 204 aaPredicted RBP23.16■■□□□ 1.3
MUC1-220ENST00000498431 AKAP12Q02952 1782 aa23.16■■□□□ 1.3
MUC1-220ENST00000498431 TTC21BQ7Z4L5 1316 aa23.15■■□□□ 1.3
MUC1-220ENST00000498431 CASZ1Q86V15 1759 aa23.15■■□□□ 1.3
MUC1-220ENST00000498431 SOX12O15370 315 aa23.15■■□□□ 1.3
MUC1-220ENST00000498431 ARHGEF25Q86VW2 580 aa23.15■■□□□ 1.3
MUC1-220ENST00000498431 BCL11BQ9C0K0 894 aaPredicted RBP23.15■■□□□ 1.3
MUC1-220ENST00000498431 YY1P25490 414 aa23.14■■□□□ 1.29
MUC1-220ENST00000498431 PROM2Q8N271 834 aa23.14■■□□□ 1.29
MUC1-220ENST00000498431 PDGFDQ9GZP0 370 aaPredicted RBP23.13■■□□□ 1.29
MUC1-220ENST00000498431 NFAT5O94916 1531 aa23.12■■□□□ 1.29
MUC1-220ENST00000498431 SIN3AQ96ST3 1273 aa23.11■■□□□ 1.29
MUC1-220ENST00000498431 NINLQ9Y2I6 1382 aa23.11■■□□□ 1.29
MUC1-220ENST00000498431 BCL9O00512 1426 aa23.1■■□□□ 1.29
MUC1-220ENST00000498431 KCNH5Q8NCM2 988 aa23.09■■□□□ 1.29
MUC1-220ENST00000498431 ZNF692Q9BU19 519 aaPredicted RBP23.09■■□□□ 1.29
MUC1-220ENST00000498431 CARD10Q9BWT7 1032 aa23.09■■□□□ 1.29
MUC1-220ENST00000498431 CSB-PGBD3P0DP91 1061 aa23.08■■□□□ 1.29
MUC1-220ENST00000498431 CDCA7Q9BWT1 371 aaPredicted RBP23.08■■□□□ 1.29
MUC1-220ENST00000498431 ROCK2O75116 1388 aaKnown RBP23.08■■□□□ 1.29
MUC1-220ENST00000498431 TTC21AQ8NDW8 1320 aa23.08■■□□□ 1.28
MUC1-220ENST00000498431 MON2Q7Z3U7 1717 aa23.05■■□□□ 1.28
MUC1-220ENST00000498431 KTN1Q86UP2 1357 aaKnown RBP23.05■■□□□ 1.28
MUC1-220ENST00000498431 ZBTB7AO95365 584 aa23.05■■□□□ 1.28
MUC1-220ENST00000498431 MYOM1P52179 1685 aa23.05■■□□□ 1.28
MUC1-220ENST00000498431 UTRNP46939 3433 aa23.04■■□□□ 1.28
MUC1-220ENST00000498431 TXNRD1Q16881 649 aa23.04■■□□□ 1.28
MUC1-220ENST00000498431 TNS2Q63HR2 1409 aa23.03■■□□□ 1.28
MUC1-220ENST00000498431 EXOC5O00471 708 aa23.03■■□□□ 1.28
MUC1-220ENST00000498431 CCDC7Q96M83 1385 aa23.02■■□□□ 1.28
MUC1-220ENST00000498431 PTGER2P43116 358 aa23.02■■□□□ 1.28
MUC1-220ENST00000498431 NEUROD1Q13562 356 aa23.02■■□□□ 1.28
MUC1-220ENST00000498431 ABCC6O95255 1503 aa23.02■■□□□ 1.28
MUC1-220ENST00000498431 ATF5Q9Y2D1 282 aaPredicted RBP23.01■■□□□ 1.27
MUC1-220ENST00000498431 NHSQ6T4R5 1651 aa23■■□□□ 1.27
MUC1-220ENST00000498431 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23■■□□□ 1.27
MUC1-220ENST00000498431 USP54Q70EL1 1684 aa23■■□□□ 1.27
MUC1-220ENST00000498431 CD163L1Q9NR16 1453 aa22.99■■□□□ 1.27
MUC1-220ENST00000498431 SLC15A2Q16348 729 aa22.99■■□□□ 1.27
MUC1-220ENST00000498431 STK32BQ9NY57 414 aa22.99■■□□□ 1.27
MUC1-220ENST00000498431 DCAF8L1A6NGE4 600 aa22.98■■□□□ 1.27
MUC1-220ENST00000498431 NME9Q86XW9 330 aa22.98■■□□□ 1.27
MUC1-220ENST00000498431 ACSBG1Q96GR2 724 aa22.98■■□□□ 1.27
MUC1-220ENST00000498431 LTN1O94822 1766 aa22.98■■□□□ 1.27
MUC1-220ENST00000498431 USP31Q70CQ4 1352 aa22.98■■□□□ 1.27
MUC1-220ENST00000498431 ERBB3P21860 1342 aa22.97■■□□□ 1.27
MUC1-220ENST00000498431 SBNO2Q9Y2G9 1366 aa22.96■■□□□ 1.27
MUC1-220ENST00000498431 NLRP2Q9NX02 1062 aa22.95■■□□□ 1.26
MUC1-220ENST00000498431 PAPPAQ13219 1627 aa22.94■■□□□ 1.26
MUC1-220ENST00000498431 BTAF1O14981 1849 aa22.93■■□□□ 1.26
MUC1-220ENST00000498431 SGIP1Q9BQI5 828 aa22.92■■□□□ 1.26
MUC1-220ENST00000498431 FHDC1Q9C0D6 1143 aaPredicted RBP22.92■■□□□ 1.26
MUC1-220ENST00000498431 IL2RBP14784 551 aa22.91■■□□□ 1.26
MUC1-220ENST00000498431 MTFR1LQ9H019 292 aa22.91■■□□□ 1.26
MUC1-220ENST00000498431 SLC12A5Q9H2X9 1139 aa22.91■■□□□ 1.26
MUC1-220ENST00000498431 TMC1Q8TDI8 760 aa22.9■■□□□ 1.26
MUC1-220ENST00000498431 ANKRD24Q8TF21 1146 aa22.9■■□□□ 1.26
MUC1-220ENST00000498431 SYT17Q9BSW7 474 aa22.9■■□□□ 1.26
MUC1-220ENST00000498431 ZNF827Q17R98 1081 aa22.88■■□□□ 1.25
MUC1-220ENST00000498431 CARD11Q9BXL7 1154 aa22.88■■□□□ 1.25
MUC1-220ENST00000498431 EDC4Q6P2E9 1401 aaKnown RBP22.88■■□□□ 1.25
MUC1-220ENST00000498431 A0A1W2PP64 1363 aa22.87■■□□□ 1.25
MUC1-220ENST00000498431 KAT6BQ8WYB5 2073 aa22.86■■□□□ 1.25
MUC1-220ENST00000498431 HDGFL2Q7Z4V5 671 aaPredicted RBP22.86■■□□□ 1.25
MUC1-220ENST00000498431 LRRC4BQ9NT99 713 aa22.86■■□□□ 1.25
MUC1-220ENST00000498431 GOLGB1Q14789 3259 aaKnown RBP22.84■■□□□ 1.25
MUC1-220ENST00000498431 ZNF784Q8NCA9 323 aaPredicted RBP22.84■■□□□ 1.25
MUC1-220ENST00000498431 ARXQ96QS3 562 aa22.82■■□□□ 1.24
MUC1-220ENST00000498431 DDX54Q8TDD1 881 aaKnown RBP22.8■■□□□ 1.24
MUC1-220ENST00000498431 IP6K1Q92551 441 aa22.8■■□□□ 1.24
MUC1-220ENST00000498431 LTV1Q96GA3 475 aaPredicted RBP22.8■■□□□ 1.24
MUC1-220ENST00000498431 TERF2IPQ9NYB0 399 aa22.8■■□□□ 1.24
MUC1-220ENST00000498431 CHD4Q14839 1912 aa22.79■■□□□ 1.24
MUC1-220ENST00000498431 FAM208AQ9UK61 1670 aaKnown RBP22.79■■□□□ 1.24
MUC1-220ENST00000498431 AKT1S1Q96B36 256 aa22.78■■□□□ 1.24
MUC1-220ENST00000498431 MAP3K5Q99683 1374 aa22.77■■□□□ 1.24
MUC1-220ENST00000498431 RGPD2P0DJD1 1756 aa22.77■■□□□ 1.24
MUC1-220ENST00000498431 FBLN1P23142 703 aa22.77■■□□□ 1.24
MUC1-220ENST00000498431 KCNQ4P56696 695 aa22.77■■□□□ 1.24
MUC1-220ENST00000498431 TUBGCP6Q96RT7 1819 aa22.77■■□□□ 1.24
MUC1-220ENST00000498431 QSER1Q2KHR3 1735 aa22.77■■□□□ 1.23
MUC1-220ENST00000498431 DOT1LQ8TEK3 1739 aa22.76■■□□□ 1.23
MUC1-220ENST00000498431 SHANK3Q9BYB0 1731 aa22.76■■□□□ 1.23
MUC1-220ENST00000498431 MAP3K19Q56UN5 1328 aa22.75■■□□□ 1.23
MUC1-220ENST00000498431 PUS7Q96PZ0 661 aaKnown RBP22.74■■□□□ 1.23
MUC1-220ENST00000498431 PNPLA7Q6ZV29 1317 aa22.74■■□□□ 1.23
MUC1-220ENST00000498431 COL24A1Q17RW2 1714 aa22.74■■□□□ 1.23
MUC1-220ENST00000498431 HOXC9P31274 260 aa22.73■■□□□ 1.23
MUC1-220ENST00000498431 SLC27A3Q5K4L6 730 aa22.73■■□□□ 1.23
MUC1-220ENST00000498431 TESK2Q96S53 571 aa22.73■■□□□ 1.23
MUC1-220ENST00000498431 NSD2O96028 1365 aa22.73■■□□□ 1.23
MUC1-220ENST00000498431 LY75O60449 1722 aa22.72■■□□□ 1.23
MUC1-220ENST00000498431 PRIM1P49642 420 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms