RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 DEPDC4Q8N2C3 294 aa6.33□□□□□ -1.4
CALD1-224ENST00000498254 ZSCAN1Q8NBB4 408 aa6.33□□□□□ -1.4
CALD1-224ENST00000498254 MTMR7Q9Y216 660 aa6.33□□□□□ -1.4
CALD1-224ENST00000498254 KRTAP4-8A0A0G2JLE6 195 aa6.32□□□□□ -1.4
CALD1-224ENST00000498254 BRD1O95696 1058 aa6.32□□□□□ -1.4
CALD1-224ENST00000498254 ADH1BP00325 375 aa6.32□□□□□ -1.4
CALD1-224ENST00000498254 F12P00748 615 aaPredicted RBP6.32□□□□□ -1.4
CALD1-224ENST00000498254 SKIP12755 728 aa6.32□□□□□ -1.4
CALD1-224ENST00000498254 FOXD4L5Q5VV16 416 aaPredicted RBP6.32□□□□□ -1.4
CALD1-224ENST00000498254 FOXD4L4Q8WXT5 416 aaPredicted RBP6.32□□□□□ -1.4
CALD1-224ENST00000498254 PRDM9Q9NQV7 894 aa6.32□□□□□ -1.4
CALD1-224ENST00000498254 NR1I2O75469 434 aa6.31□□□□□ -1.4
CALD1-224ENST00000498254 ATG7O95352 703 aa6.31□□□□□ -1.4
CALD1-224ENST00000498254 KCNA1Q09470 495 aa6.31□□□□□ -1.4
CALD1-224ENST00000498254 PTPRNQ16849 979 aa6.31□□□□□ -1.4
CALD1-224ENST00000498254 THAP11Q96EK4 314 aa6.31□□□□□ -1.4
CALD1-224ENST00000498254 VRTNQ9H8Y1 702 aa6.31□□□□□ -1.4
CALD1-224ENST00000498254 AAASQ9NRG9 546 aa6.31□□□□□ -1.4
CALD1-224ENST00000498254 IVNS1ABPQ9Y6Y0 642 aa6.31□□□□□ -1.4
CALD1-224ENST00000498254 USP17L3A6NCW0 530 aa6.3□□□□□ -1.4
CALD1-224ENST00000498254 USP17L4A6NCW7 530 aa6.3□□□□□ -1.4
CALD1-224ENST00000498254 TMEM88BA6NKF7 163 aa6.3□□□□□ -1.4
CALD1-224ENST00000498254 ST8SIA5O15466 376 aa6.3□□□□□ -1.4
CALD1-224ENST00000498254 USP17L2Q6R6M4 530 aa6.3□□□□□ -1.4
CALD1-224ENST00000498254 USP17L1Q7RTZ2 530 aa6.3□□□□□ -1.4
CALD1-224ENST00000498254 FAM174AQ8TBP5 190 aa6.3□□□□□ -1.4
CALD1-224ENST00000498254 SLC6A16Q9GZN6 736 aa6.3□□□□□ -1.4
CALD1-224ENST00000498254 PCDHB9Q9Y5E1 797 aa6.3□□□□□ -1.4
CALD1-224ENST00000498254 USP17L5A8MUK1 530 aa6.29□□□□□ -1.4
CALD1-224ENST00000498254 PLA2G2CQ5R387 149 aa6.29□□□□□ -1.4
CALD1-224ENST00000498254 RGS22Q8NE09 1264 aa6.29□□□□□ -1.4
CALD1-224ENST00000498254 STK32AQ8WU08 396 aa6.29□□□□□ -1.4
CALD1-224ENST00000498254 NUDT12Q9BQG2 462 aa6.29□□□□□ -1.4
CALD1-224ENST00000498254 PATL2C9JE40 543 aaKnown RBP6.28□□□□□ -1.4
CALD1-224ENST00000498254 CCNYL3P0C7X3 344 aa6.28□□□□□ -1.4
CALD1-224ENST00000498254 KANK4Q5T7N3 995 aaPredicted RBP6.28□□□□□ -1.4
CALD1-224ENST00000498254 TMEM164Q5U3C3 297 aa6.28□□□□□ -1.4
CALD1-224ENST00000498254 FAM160A2Q8N612 972 aaPredicted RBP6.28□□□□□ -1.4
CALD1-224ENST00000498254 SPSB2Q99619 263 aa6.28□□□□□ -1.4
CALD1-224ENST00000498254 ZMIZ1Q9ULJ6 1067 aa6.28□□□□□ -1.4
CALD1-224ENST00000498254 NOVA2Q9UNW9 492 aaKnown RBP6.28□□□□□ -1.4
CALD1-224ENST00000498254 SALL2Q9Y467 1007 aaPredicted RBP6.28□□□□□ -1.4
CALD1-224ENST00000498254 FOXC1Q12948 553 aa6.27□□□□□ -1.41
CALD1-224ENST00000498254 SLFNL1Q499Z3 407 aa6.27□□□□□ -1.41
CALD1-224ENST00000498254 CRIPAKQ8N1N5 446 aa6.27□□□□□ -1.41
CALD1-224ENST00000498254 CCDC24Q8N4L8 307 aa6.27□□□□□ -1.41
CALD1-224ENST00000498254 ZNF428Q96B54 188 aa6.27□□□□□ -1.41
CALD1-224ENST00000498254 PKD2L1Q9P0L9 805 aa6.27□□□□□ -1.41
CALD1-224ENST00000498254 ZC3H4Q9UPT8 1303 aaKnown RBP6.26□□□□□ -1.41
CALD1-224ENST00000498254 C11orf95C9JLR9 678 aaPredicted RBP6.26□□□□□ -1.41
CALD1-224ENST00000498254 PTK2Q05397 1052 aa6.26□□□□□ -1.41
CALD1-224ENST00000498254 KCNH2Q12809 1159 aa6.26□□□□□ -1.41
CALD1-224ENST00000498254 NCOA4Q13772 614 aa6.26□□□□□ -1.41
CALD1-224ENST00000498254 CRTC2Q53ET0 693 aaPredicted RBP6.26□□□□□ -1.41
CALD1-224ENST00000498254 RNF135Q8IUD6 432 aa6.26□□□□□ -1.41
CALD1-224ENST00000498254 OCSTAMPQ9BR26 566 aa6.26□□□□□ -1.41
CALD1-224ENST00000498254 CARD14Q9BXL6 1004 aa6.26□□□□□ -1.41
CALD1-224ENST00000498254 MKRN1Q9UHC7 482 aaKnown RBP6.26□□□□□ -1.41
CALD1-224ENST00000498254 USP17L15C9J2P7 530 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 USP17L10C9JJH3 530 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 USP17L13C9JLJ4 530 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 USP17L12C9JPN9 530 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 USP17L11C9JVI0 530 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 USP17L21D6R901 530 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 USP17L18D6R9N7 530 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 USP17L22D6RA61 530 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 USP17L17D6RBQ6 530 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 USP17L19D6RCP7 530 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 USP17L20D6RJB6 530 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 DXOO77932 396 aaKnown RBP6.25□□□□□ -1.41
CALD1-224ENST00000498254 RPIAP49247 311 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 RBM25P49756 843 aaKnown RBP6.25□□□□□ -1.41
CALD1-224ENST00000498254 USP17L24Q0WX57 530 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 MSS51Q4VC12 460 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 ARHGAP9Q9BRR9 750 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 KRTAP9-9Q9BYP9 154 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 KRTAP9-4Q9BYQ2 154 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 EVA1BQ9NVM1 165 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 CEP126Q9P2H0 1117 aa6.25□□□□□ -1.41
CALD1-224ENST00000498254 AVPP01185 164 aa6.24□□□□□ -1.41
CALD1-224ENST00000498254 RASA1P20936 1047 aa6.24□□□□□ -1.41
CALD1-224ENST00000498254 NBPF14Q5TI25 921 aa6.24□□□□□ -1.41
CALD1-224ENST00000498254 PDXDC2PQ6P474 469 aa6.24□□□□□ -1.41
CALD1-224ENST00000498254 PLPP7Q8NBV4 271 aa6.24□□□□□ -1.41
CALD1-224ENST00000498254 NFATC2IPQ8NCF5 419 aa6.24□□□□□ -1.41
CALD1-224ENST00000498254 ARMC2Q8NEN0 867 aa6.24□□□□□ -1.41
CALD1-224ENST00000498254 ADAM32Q8TC27 787 aa6.24□□□□□ -1.41
CALD1-224ENST00000498254 DACH1Q9UI36 760 aa6.24□□□□□ -1.41
CALD1-224ENST00000498254 MAGEB6P1A0A0J9YX57 407 aa6.23□□□□□ -1.41
CALD1-224ENST00000498254 CD2BP2O95400 341 aaKnown RBP6.23□□□□□ -1.41
CALD1-224ENST00000498254 LARP1Q6PKG0 1096 aaKnown RBP6.23□□□□□ -1.41
CALD1-224ENST00000498254 ZBTB33Q86T24 672 aa6.23□□□□□ -1.41
CALD1-224ENST00000498254 PLEKHM2Q8IWE5 1019 aa6.23□□□□□ -1.41
CALD1-224ENST00000498254 ZNF594Q96JF6 807 aaPredicted RBP6.23□□□□□ -1.41
CALD1-224ENST00000498254 UNC93B1Q9H1C4 597 aa6.23□□□□□ -1.41
CALD1-224ENST00000498254 TOR4AQ9NXH8 423 aa6.23□□□□□ -1.41
CALD1-224ENST00000498254 AXIN1O15169 862 aa6.22□□□□□ -1.41
CALD1-224ENST00000498254 MMP16P51512 607 aa6.22□□□□□ -1.41
CALD1-224ENST00000498254 KCNMA1Q12791 1236 aa6.22□□□□□ -1.41
CALD1-224ENST00000498254 ELOAQ14241 798 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms