RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 CD163L1Q9NR16 1453 aa14.21□□□□□ -0.13
PTPRN-218ENST00000497977 DDB1Q16531 1140 aa14.21□□□□□ -0.13
PTPRN-218ENST00000497977 CARD14Q9BXL6 1004 aa14.21□□□□□ -0.13
PTPRN-218ENST00000497977 RGS12O14924 1447 aa14.21□□□□□ -0.13
PTPRN-218ENST00000497977 ALS2Q96Q42 1657 aa14.2□□□□□ -0.14
PTPRN-218ENST00000497977 ANKRD24Q8TF21 1146 aa14.2□□□□□ -0.14
PTPRN-218ENST00000497977 CRB1P82279 1406 aa14.2□□□□□ -0.14
PTPRN-218ENST00000497977 COL14A1Q05707 1796 aaKnown RBP14.19□□□□□ -0.14
PTPRN-218ENST00000497977 CCDC7Q96M83 1385 aa14.19□□□□□ -0.14
PTPRN-218ENST00000497977 SLIT3O75094 1523 aa14.17□□□□□ -0.14
PTPRN-218ENST00000497977 BAG6P46379 1132 aa14.17□□□□□ -0.14
PTPRN-218ENST00000497977 MORC1Q86VD1 984 aa14.17□□□□□ -0.14
PTPRN-218ENST00000497977 KIF24Q5T7B8 1368 aa14.17□□□□□ -0.14
PTPRN-218ENST00000497977 PPM1GO15355 546 aaPredicted RBP14.16□□□□□ -0.14
PTPRN-218ENST00000497977 IL2RBP14784 551 aa14.16□□□□□ -0.14
PTPRN-218ENST00000497977 HOXC9P31274 260 aa14.16□□□□□ -0.14
PTPRN-218ENST00000497977 LTV1Q96GA3 475 aaPredicted RBP14.16□□□□□ -0.14
PTPRN-218ENST00000497977 ERBB3P21860 1342 aa14.15□□□□□ -0.14
PTPRN-218ENST00000497977 MAP3K19Q56UN5 1328 aa14.15□□□□□ -0.14
PTPRN-218ENST00000497977 BLMP54132 1417 aaPredicted RBP14.15□□□□□ -0.14
PTPRN-218ENST00000497977 NSD3Q9BZ95 1437 aa14.15□□□□□ -0.14
PTPRN-218ENST00000497977 COL5A2P05997 1499 aaPredicted RBP14.15□□□□□ -0.14
PTPRN-218ENST00000497977 NSD2O96028 1365 aa14.15□□□□□ -0.14
PTPRN-218ENST00000497977 SMG6Q86US8 1419 aaKnown RBP14.15□□□□□ -0.14
PTPRN-218ENST00000497977 KIF7Q2M1P5 1343 aa14.15□□□□□ -0.15
PTPRN-218ENST00000497977 AKAP12Q02952 1782 aa14.14□□□□□ -0.15
PTPRN-218ENST00000497977 CAMTA1Q9Y6Y1 1673 aa14.14□□□□□ -0.15
PTPRN-218ENST00000497977 NWD2Q9ULI1 1742 aa14.14□□□□□ -0.15
PTPRN-218ENST00000497977 OVOS2A0A0J9YW53 1432 aa14.14□□□□□ -0.15
PTPRN-218ENST00000497977 OVOS2Q6IE36 1432 aa14.14□□□□□ -0.15
PTPRN-218ENST00000497977 RTL1A6NKG5 1358 aa14.13□□□□□ -0.15
PTPRN-218ENST00000497977 HMGB2P26583 209 aaKnown RBP14.13□□□□□ -0.15
PTPRN-218ENST00000497977 RRS1Q15050 365 aaKnown RBP14.13□□□□□ -0.15
PTPRN-218ENST00000497977 RAPGEF4Q8WZA2 1011 aa14.13□□□□□ -0.15
PTPRN-218ENST00000497977 MON2Q7Z3U7 1717 aa14.12□□□□□ -0.15
PTPRN-218ENST00000497977 WASHC2AQ641Q2 1341 aa14.11□□□□□ -0.15
PTPRN-218ENST00000497977 FLT4P35916 1363 aa14.1□□□□□ -0.15
PTPRN-218ENST00000497977 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.1□□□□□ -0.15
PTPRN-218ENST00000497977 NRKQ7Z2Y5 1582 aa14.1□□□□□ -0.15
PTPRN-218ENST00000497977 APBA3O96018 575 aa14.1□□□□□ -0.15
PTPRN-218ENST00000497977 TNNT2P45379 298 aaPredicted RBP14.1□□□□□ -0.15
PTPRN-218ENST00000497977 HSP90AB2PQ58FF8 381 aa14.1□□□□□ -0.15
PTPRN-218ENST00000497977 ABCC6O95255 1503 aa14.1□□□□□ -0.15
PTPRN-218ENST00000497977 MARF1Q9Y4F3 1742 aaKnown RBP14.1□□□□□ -0.15
PTPRN-218ENST00000497977 INSRP06213 1382 aa14.09□□□□□ -0.15
PTPRN-218ENST00000497977 TRIM37O94972 964 aa14.09□□□□□ -0.15
PTPRN-218ENST00000497977 TATP17735 454 aaPredicted RBP14.09□□□□□ -0.15
PTPRN-218ENST00000497977 FBLN1P23142 703 aa14.09□□□□□ -0.15
PTPRN-218ENST00000497977 POLKQ9UBT6 870 aa14.09□□□□□ -0.15
PTPRN-218ENST00000497977 GLI3P10071 1580 aa14.09□□□□□ -0.15
PTPRN-218ENST00000497977 ZCRB1Q8TBF4 217 aaKnown RBP14.08□□□□□ -0.16
PTPRN-218ENST00000497977 KIF20BQ96Q89 1820 aa14.08□□□□□ -0.16
PTPRN-218ENST00000497977 PIK3C2AO00443 1686 aa14.07□□□□□ -0.16
PTPRN-218ENST00000497977 FAM182BQ5T319 152 aa14.07□□□□□ -0.16
PTPRN-218ENST00000497977 NBPF14Q5TI25 921 aa14.07□□□□□ -0.16
PTPRN-218ENST00000497977 BCL11BQ9C0K0 894 aaPredicted RBP14.07□□□□□ -0.16
PTPRN-218ENST00000497977 PHRF1Q9P1Y6 1649 aaKnown RBP14.07□□□□□ -0.16
PTPRN-218ENST00000497977 NFAT5O94916 1531 aa14.06□□□□□ -0.16
PTPRN-218ENST00000497977 PER1O15534 1290 aaPredicted RBP14.06□□□□□ -0.16
PTPRN-218ENST00000497977 NBPF6Q5VWK0 638 aa14.06□□□□□ -0.16
PTPRN-218ENST00000497977 DDX54Q8TDD1 881 aaKnown RBP14.06□□□□□ -0.16
PTPRN-218ENST00000497977 NBPF4Q96M43 638 aa14.06□□□□□ -0.16
PTPRN-218ENST00000497977 SPG7Q9UQ90 795 aa14.06□□□□□ -0.16
PTPRN-218ENST00000497977 EMILIN1Q9Y6C2 1016 aa14.06□□□□□ -0.16
PTPRN-218ENST00000497977 PLCH1Q4KWH8 1693 aa14.05□□□□□ -0.16
PTPRN-218ENST00000497977 AMER1Q5JTC6 1135 aaPredicted RBP14.05□□□□□ -0.16
PTPRN-218ENST00000497977 MARCH10Q8NA82 808 aaPredicted RBP14.05□□□□□ -0.16
PTPRN-218ENST00000497977 PLSCR1O15162 318 aa14.04□□□□□ -0.16
PTPRN-218ENST00000497977 OVOS2A0A0G2JMS6 1433 aa14.04□□□□□ -0.16
PTPRN-218ENST00000497977 ABCA3Q99758 1704 aa14.04□□□□□ -0.16
PTPRN-218ENST00000497977 CC2D1BQ5T0F9 858 aaKnown RBP14.03□□□□□ -0.16
PTPRN-218ENST00000497977 DEFB132Q7Z7B7 95 aa14.03□□□□□ -0.16
PTPRN-218ENST00000497977 CFAP53Q96M91 514 aa14.03□□□□□ -0.16
PTPRN-218ENST00000497977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.03□□□□□ -0.16
PTPRN-218ENST00000497977 PARD3Q8TEW0 1356 aa14.03□□□□□ -0.16
PTPRN-218ENST00000497977 LMO7Q8WWI1 1683 aa14.02□□□□□ -0.16
PTPRN-218ENST00000497977 NPC1L1Q9UHC9 1359 aa14.02□□□□□ -0.17
PTPRN-218ENST00000497977 EN1Q05925 392 aaPredicted RBP14.02□□□□□ -0.17
PTPRN-218ENST00000497977 BCL9O00512 1426 aa14.01□□□□□ -0.17
PTPRN-218ENST00000497977 AMOTQ4VCS5 1084 aa14.01□□□□□ -0.17
PTPRN-218ENST00000497977 CRYBG1Q9Y4K1 1723 aa14.01□□□□□ -0.17
PTPRN-218ENST00000497977 MTHFSP49914 203 aa14□□□□□ -0.17
PTPRN-218ENST00000497977 PLEKHO1Q53GL0 409 aaPredicted RBP14□□□□□ -0.17
PTPRN-218ENST00000497977 EYA1Q99502 592 aa14□□□□□ -0.17
PTPRN-218ENST00000497977 NUDCQ9Y266 331 aa14□□□□□ -0.17
PTPRN-218ENST00000497977 ANKRD26Q9UPS8 1709 aa14□□□□□ -0.17
PTPRN-218ENST00000497977 NRAPQ86VF7 1730 aa13.99□□□□□ -0.17
PTPRN-218ENST00000497977 PCDH11XQ9BZA7 1347 aa13.99□□□□□ -0.17
PTPRN-218ENST00000497977 PCDH11YQ9BZA8 1340 aa13.99□□□□□ -0.17
PTPRN-218ENST00000497977 HSP90AB1P08238 724 aaKnown RBP13.99□□□□□ -0.17
PTPRN-218ENST00000497977 EIF4A2Q14240 407 aaKnown RBP13.99□□□□□ -0.17
PTPRN-218ENST00000497977 CAMKK2Q96RR4 588 aa13.99□□□□□ -0.17
PTPRN-218ENST00000497977 ZNF316A6NFI3 1004 aaPredicted RBP13.98□□□□□ -0.17
PTPRN-218ENST00000497977 DIAPH1O60610 1272 aaKnown RBP13.98□□□□□ -0.17
PTPRN-218ENST00000497977 CNGB1Q14028 1251 aaPredicted RBP13.98□□□□□ -0.17
PTPRN-218ENST00000497977 IFNL2Q8IZJ0 200 aa13.98□□□□□ -0.17
PTPRN-218ENST00000497977 USHBP1Q8N6Y0 703 aa13.98□□□□□ -0.17
PTPRN-218ENST00000497977 SYTL4Q96C24 671 aaPredicted RBP13.98□□□□□ -0.17
PTPRN-218ENST00000497977 EZH2Q15910 746 aaKnown RBP13.97□□□□□ -0.17
PTPRN-218ENST00000497977 DISP2A7MBM2 1401 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms