RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CRB1P82279 1406 aa21.38■■□□□ 1.01
NUP50-219ENST00000497960 THSD7AQ9UPZ6 1657 aa21.37■■□□□ 1.01
NUP50-219ENST00000497960 ANKRD36BQ8N2N9 1353 aa21.36■■□□□ 1.01
NUP50-219ENST00000497960 EP400Q96L91 3159 aa21.36■■□□□ 1.01
NUP50-219ENST00000497960 NFAT5O94916 1531 aa21.36■■□□□ 1.01
NUP50-219ENST00000497960 CSB-PGBD3P0DP91 1061 aa21.36■■□□□ 1.01
NUP50-219ENST00000497960 PDE3BQ13370 1112 aa21.36■■□□□ 1.01
NUP50-219ENST00000497960 WDR17Q8IZU2 1322 aa21.35■■□□□ 1.01
NUP50-219ENST00000497960 FAM182BQ5T319 152 aa21.35■■□□□ 1.01
NUP50-219ENST00000497960 COG3Q96JB2 828 aa21.34■■□□□ 1.01
NUP50-219ENST00000497960 COL18A1P39060 1754 aa21.33■■□□□ 1.01
NUP50-219ENST00000497960 FAM196AQ6ZSG2 479 aa21.33■■□□□ 1.01
NUP50-219ENST00000497960 USP54Q70EL1 1684 aa21.32■■□□□ 1
NUP50-219ENST00000497960 EIF4G2P78344 907 aaKnown RBP eCLIP21.32■■□□□ 1
NUP50-219ENST00000497960 OVOS2A0A0J9YW53 1432 aa21.31■■□□□ 1
NUP50-219ENST00000497960 OVOS2Q6IE36 1432 aa21.31■■□□□ 1
NUP50-219ENST00000497960 DEFB132Q7Z7B7 95 aa21.31■■□□□ 1
NUP50-219ENST00000497960 ABCC6O95255 1503 aa21.3■■□□□ 1
NUP50-219ENST00000497960 BAG6P46379 1132 aa21.3■■□□□ 1
NUP50-219ENST00000497960 CARD10Q9BWT7 1032 aa21.3■■□□□ 1
NUP50-219ENST00000497960 CDCA7Q9BWT1 371 aaPredicted RBP21.29■■□□□ 1
NUP50-219ENST00000497960 HSPA5P11021 654 aaKnown RBP21.27■■□□□ 1
NUP50-219ENST00000497960 DDB1Q16531 1140 aa21.26■□□□□ 0.99
NUP50-219ENST00000497960 POLR3GLQ9BT43 218 aa21.26■□□□□ 0.99
NUP50-219ENST00000497960 RGPD5Q99666 1765 aa21.25■□□□□ 0.99
NUP50-219ENST00000497960 CCDC7Q96M83 1385 aa21.25■□□□□ 0.99
NUP50-219ENST00000497960 C11orf95C9JLR9 678 aaPredicted RBP21.25■□□□□ 0.99
NUP50-219ENST00000497960 FYB1O15117 783 aa21.25■□□□□ 0.99
NUP50-219ENST00000497960 TRIM37O94972 964 aa21.25■□□□□ 0.99
NUP50-219ENST00000497960 GGNBP2Q9H3C7 697 aa21.25■□□□□ 0.99
NUP50-219ENST00000497960 NLRP2Q9NX02 1062 aa21.25■□□□□ 0.99
NUP50-219ENST00000497960 ERBB3P21860 1342 aa21.25■□□□□ 0.99
NUP50-219ENST00000497960 ANKRD24Q8TF21 1146 aa21.24■□□□□ 0.99
NUP50-219ENST00000497960 IP6K1Q92551 441 aa21.24■□□□□ 0.99
NUP50-219ENST00000497960 PARP4Q9UKK3 1724 aaKnown RBP21.23■□□□□ 0.99
NUP50-219ENST00000497960 LTN1O94822 1766 aa21.23■□□□□ 0.99
NUP50-219ENST00000497960 AMPHP49418 695 aa21.22■□□□□ 0.99
NUP50-219ENST00000497960 MAP3K19Q56UN5 1328 aa21.22■□□□□ 0.99
NUP50-219ENST00000497960 RGPD1P0DJD0 1748 aa21.21■□□□□ 0.99
NUP50-219ENST00000497960 EN1Q05925 392 aaPredicted RBP21.21■□□□□ 0.99
NUP50-219ENST00000497960 CARD14Q9BXL6 1004 aa21.21■□□□□ 0.99
NUP50-219ENST00000497960 EXOC5O00471 708 aa21.2■□□□□ 0.98
NUP50-219ENST00000497960 NSD3Q9BZ95 1437 aa21.2■□□□□ 0.98
NUP50-219ENST00000497960 APBA3O96018 575 aa21.19■□□□□ 0.98
NUP50-219ENST00000497960 FBLN1P23142 703 aa21.19■□□□□ 0.98
NUP50-219ENST00000497960 LTV1Q96GA3 475 aaPredicted RBP21.19■□□□□ 0.98
NUP50-219ENST00000497960 OVOS2A0A0G2JMS6 1433 aa21.19■□□□□ 0.98
NUP50-219ENST00000497960 HOXC9P31274 260 aa21.18■□□□□ 0.98
NUP50-219ENST00000497960 DISP2A7MBM2 1401 aa21.18■□□□□ 0.98
NUP50-219ENST00000497960 ZEB1P37275 1124 aaPredicted RBP21.17■□□□□ 0.98
NUP50-219ENST00000497960 MYOM1P52179 1685 aa21.17■□□□□ 0.98
NUP50-219ENST00000497960 LRRC37A3O60309 1634 aa21.16■□□□□ 0.98
NUP50-219ENST00000497960 CGNL1Q0VF96 1302 aa21.16■□□□□ 0.98
NUP50-219ENST00000497960 IL2RBP14784 551 aa21.16■□□□□ 0.98
NUP50-219ENST00000497960 RRS1Q15050 365 aaKnown RBP21.16■□□□□ 0.98
NUP50-219ENST00000497960 RTL1A6NKG5 1358 aa21.15■□□□□ 0.98
NUP50-219ENST00000497960 MARCH10Q8NA82 808 aaPredicted RBP21.15■□□□□ 0.98
NUP50-219ENST00000497960 WNK3Q9BYP7 1800 aa21.14■□□□□ 0.97
NUP50-219ENST00000497960 TNS1Q9HBL0 1735 aaKnown RBP21.13■□□□□ 0.97
NUP50-219ENST00000497960 EZH2Q15910 746 aaKnown RBP21.13■□□□□ 0.97
NUP50-219ENST00000497960 CAMKK2Q96RR4 588 aa21.13■□□□□ 0.97
NUP50-219ENST00000497960 KIF20BQ96Q89 1820 aa21.13■□□□□ 0.97
NUP50-219ENST00000497960 PARD3Q8TEW0 1356 aa21.12■□□□□ 0.97
NUP50-219ENST00000497960 TNS2Q63HR2 1409 aa21.12■□□□□ 0.97
NUP50-219ENST00000497960 BCL11BQ9C0K0 894 aaPredicted RBP21.1■□□□□ 0.97
NUP50-219ENST00000497960 PANK3Q9H999 370 aa21.1■□□□□ 0.97
NUP50-219ENST00000497960 BCL9O00512 1426 aa21.1■□□□□ 0.97
NUP50-219ENST00000497960 PEAK1Q9H792 1746 aa21.09■□□□□ 0.97
NUP50-219ENST00000497960 SMG6Q86US8 1419 aaKnown RBP21.09■□□□□ 0.97
NUP50-219ENST00000497960 KIF24Q5T7B8 1368 aa21.09■□□□□ 0.97
NUP50-219ENST00000497960 FAM208AQ9UK61 1670 aaKnown RBP21.08■□□□□ 0.96
NUP50-219ENST00000497960 FLT4P35916 1363 aa21.08■□□□□ 0.96
NUP50-219ENST00000497960 HSP90AB2PQ58FF8 381 aa21.07■□□□□ 0.96
NUP50-219ENST00000497960 PSDA5PKW4 1024 aaPredicted RBP21.06■□□□□ 0.96
NUP50-219ENST00000497960 INSRP06213 1382 aa21.06■□□□□ 0.96
NUP50-219ENST00000497960 PPM1GO15355 546 aaPredicted RBP21.05■□□□□ 0.96
NUP50-219ENST00000497960 EMILIN1Q9Y6C2 1016 aa21.05■□□□□ 0.96
NUP50-219ENST00000497960 PLSCR1O15162 318 aa21.04■□□□□ 0.96
NUP50-219ENST00000497960 NBPF14Q5TI25 921 aa21.04■□□□□ 0.96
NUP50-219ENST00000497960 NBPF6Q5VWK0 638 aa21.04■□□□□ 0.96
NUP50-219ENST00000497960 NBPF4Q96M43 638 aa21.04■□□□□ 0.96
NUP50-219ENST00000497960 R3HDM1Q15032 1099 aaKnown RBP21.03■□□□□ 0.96
NUP50-219ENST00000497960 PTF1AQ7RTS3 328 aa21.03■□□□□ 0.96
NUP50-219ENST00000497960 DDX54Q8TDD1 881 aaKnown RBP21.03■□□□□ 0.96
NUP50-219ENST00000497960 SBF2Q86WG5 1849 aa21.03■□□□□ 0.96
NUP50-219ENST00000497960 TNNT2P45379 298 aaPredicted RBP21.01■□□□□ 0.95
NUP50-219ENST00000497960 USHBP1Q8N6Y0 703 aa21.01■□□□□ 0.95
NUP50-219ENST00000497960 ZCRB1Q8TBF4 217 aaKnown RBP21.01■□□□□ 0.95
NUP50-219ENST00000497960 RAPGEF4Q8WZA2 1011 aa21.01■□□□□ 0.95
NUP50-219ENST00000497960 ACSBG1Q96GR2 724 aa21.01■□□□□ 0.95
NUP50-219ENST00000497960 KNSTRNQ9Y448 316 aa21.01■□□□□ 0.95
NUP50-219ENST00000497960 KIF7Q2M1P5 1343 aa21.01■□□□□ 0.95
NUP50-219ENST00000497960 NSD2O96028 1365 aa21■□□□□ 0.95
NUP50-219ENST00000497960 KAT6BQ8WYB5 2073 aa21■□□□□ 0.95
NUP50-219ENST00000497960 POLKQ9UBT6 870 aa21■□□□□ 0.95
NUP50-219ENST00000497960 KCNQ2O43526 872 aa20.99■□□□□ 0.95
NUP50-219ENST00000497960 WASHC2AQ641Q2 1341 aa20.99■□□□□ 0.95
NUP50-219ENST00000497960 TATP17735 454 aaPredicted RBP20.98■□□□□ 0.95
NUP50-219ENST00000497960 RGPD2P0DJD1 1756 aa20.97■□□□□ 0.95
NUP50-219ENST00000497960 MORC1Q86VD1 984 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms