RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 PARP4Q9UKK3 1724 aaKnown RBP25.89■■□□□ 1.74
ATPAF2-209ENST00000497871 CARD10Q9BWT7 1032 aa25.89■■□□□ 1.74
ATPAF2-209ENST00000497871 COL18A1P39060 1754 aa25.89■■□□□ 1.73
ATPAF2-209ENST00000497871 OVOS2A0A0G2JMS6 1433 aa25.88■■□□□ 1.73
ATPAF2-209ENST00000497871 OVOS2A0A0J9YW53 1432 aa25.88■■□□□ 1.73
ATPAF2-209ENST00000497871 OVOS2Q6IE36 1432 aa25.88■■□□□ 1.73
ATPAF2-209ENST00000497871 CSB-PGBD3P0DP91 1061 aa25.88■■□□□ 1.73
ATPAF2-209ENST00000497871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.87■■□□□ 1.73
ATPAF2-209ENST00000497871 TMC1Q8TDI8 760 aa25.86■■□□□ 1.73
ATPAF2-209ENST00000497871 USP31Q70CQ4 1352 aa25.85■■□□□ 1.73
ATPAF2-209ENST00000497871 TONSLQ96HA7 1378 aa25.85■■□□□ 1.73
ATPAF2-209ENST00000497871 AKAP12Q02952 1782 aa25.85■■□□□ 1.73
ATPAF2-209ENST00000497871 PLSCR1O15162 318 aa25.85■■□□□ 1.73
ATPAF2-209ENST00000497871 MARCH10Q8NA82 808 aaPredicted RBP25.84■■□□□ 1.73
ATPAF2-209ENST00000497871 PUS7Q96PZ0 661 aaKnown RBP25.84■■□□□ 1.73
ATPAF2-209ENST00000497871 BCL11BQ9C0K0 894 aaPredicted RBP25.84■■□□□ 1.73
ATPAF2-209ENST00000497871 HDGFL2Q7Z4V5 671 aaPredicted RBP25.83■■□□□ 1.73
ATPAF2-209ENST00000497871 SLC12A5Q9H2X9 1139 aa25.83■■□□□ 1.73
ATPAF2-209ENST00000497871 EXOC5O00471 708 aa25.82■■□□□ 1.72
ATPAF2-209ENST00000497871 NME9Q86XW9 330 aa25.81■■□□□ 1.72
ATPAF2-209ENST00000497871 NFAT5O94916 1531 aa25.81■■□□□ 1.72
ATPAF2-209ENST00000497871 BCL9O00512 1426 aa25.8■■□□□ 1.72
ATPAF2-209ENST00000497871 CD163L1Q9NR16 1453 aa25.8■■□□□ 1.72
ATPAF2-209ENST00000497871 TERF2IPQ9NYB0 399 aa25.8■■□□□ 1.72
ATPAF2-209ENST00000497871 CCDC7Q96M83 1385 aa25.8■■□□□ 1.72
ATPAF2-209ENST00000497871 PEAK1Q9H792 1746 aa25.8■■□□□ 1.72
ATPAF2-209ENST00000497871 LRRC37A3O60309 1634 aa25.78■■□□□ 1.72
ATPAF2-209ENST00000497871 RREB1Q92766 1687 aa25.78■■□□□ 1.72
ATPAF2-209ENST00000497871 PTF1AQ7RTS3 328 aa25.78■■□□□ 1.72
ATPAF2-209ENST00000497871 ABCC6O95255 1503 aa25.76■■□□□ 1.71
ATPAF2-209ENST00000497871 MON2Q7Z3U7 1717 aa25.75■■□□□ 1.71
ATPAF2-209ENST00000497871 SLC24A1O60721 1099 aa25.75■■□□□ 1.71
ATPAF2-209ENST00000497871 NUP188Q5SRE5 1749 aa25.74■■□□□ 1.71
ATPAF2-209ENST00000497871 EDC4Q6P2E9 1401 aaKnown RBP25.74■■□□□ 1.71
ATPAF2-209ENST00000497871 ERBB3P21860 1342 aa25.74■■□□□ 1.71
ATPAF2-209ENST00000497871 PROM2Q8N271 834 aa25.73■■□□□ 1.71
ATPAF2-209ENST00000497871 SPON1Q9HCB6 807 aa25.73■■□□□ 1.71
ATPAF2-209ENST00000497871 NLRP2Q9NX02 1062 aa25.73■■□□□ 1.71
ATPAF2-209ENST00000497871 TESK2Q96S53 571 aa25.72■■□□□ 1.71
ATPAF2-209ENST00000497871 RGPD5Q99666 1765 aa25.72■■□□□ 1.71
ATPAF2-209ENST00000497871 A0A1W2PP64 1363 aa25.71■■□□□ 1.71
ATPAF2-209ENST00000497871 ST20-MTHFSA0A0A6YYL1 179 aa25.71■■□□□ 1.71
ATPAF2-209ENST00000497871 KCNQ2O43526 872 aa25.71■■□□□ 1.71
ATPAF2-209ENST00000497871 ANKRD24Q8TF21 1146 aa25.7■■□□□ 1.7
ATPAF2-209ENST00000497871 IL2RBP14784 551 aa25.69■■□□□ 1.7
ATPAF2-209ENST00000497871 SBF2Q86WG5 1849 aa25.69■■□□□ 1.7
ATPAF2-209ENST00000497871 NINLQ9Y2I6 1382 aa25.69■■□□□ 1.7
ATPAF2-209ENST00000497871 ANO8Q9HCE9 1232 aaPredicted RBP25.68■■□□□ 1.7
ATPAF2-209ENST00000497871 USP54Q70EL1 1684 aa25.68■■□□□ 1.7
ATPAF2-209ENST00000497871 WNK3Q9BYP7 1800 aa25.67■■□□□ 1.7
ATPAF2-209ENST00000497871 TNS2Q63HR2 1409 aa25.67■■□□□ 1.7
ATPAF2-209ENST00000497871 RGPD3A6NKT7 1758 aaPredicted RBP25.67■■□□□ 1.7
ATPAF2-209ENST00000497871 RGPD4Q7Z3J3 1758 aa25.67■■□□□ 1.7
ATPAF2-209ENST00000497871 TXNRD1Q16881 649 aa25.66■■□□□ 1.7
ATPAF2-209ENST00000497871 IP6K1Q92551 441 aa25.66■■□□□ 1.7
ATPAF2-209ENST00000497871 TRIM26Q12899 539 aaPredicted RBP25.65■■□□□ 1.7
ATPAF2-209ENST00000497871 PPP1R1BQ9UD71 204 aaPredicted RBP25.65■■□□□ 1.7
ATPAF2-209ENST00000497871 COG3Q96JB2 828 aa25.63■■□□□ 1.69
ATPAF2-209ENST00000497871 ACSBG1Q96GR2 724 aa25.61■■□□□ 1.69
ATPAF2-209ENST00000497871 STK32BQ9NY57 414 aa25.61■■□□□ 1.69
ATPAF2-209ENST00000497871 SLC15A2Q16348 729 aa25.59■■□□□ 1.69
ATPAF2-209ENST00000497871 PDGFDQ9GZP0 370 aaPredicted RBP25.58■■□□□ 1.69
ATPAF2-209ENST00000497871 LTN1O94822 1766 aa25.57■■□□□ 1.68
ATPAF2-209ENST00000497871 TMF1P82094 1093 aa25.57■■□□□ 1.68
ATPAF2-209ENST00000497871 LTV1Q96GA3 475 aaPredicted RBP25.57■■□□□ 1.68
ATPAF2-209ENST00000497871 MAP3K19Q56UN5 1328 aa25.57■■□□□ 1.68
ATPAF2-209ENST00000497871 ANKRD36BQ8N2N9 1353 aa25.56■■□□□ 1.68
ATPAF2-209ENST00000497871 HOXC9P31274 260 aa25.55■■□□□ 1.68
ATPAF2-209ENST00000497871 AMPHP49418 695 aa25.55■■□□□ 1.68
ATPAF2-209ENST00000497871 ZBTB7AO95365 584 aa25.54■■□□□ 1.68
ATPAF2-209ENST00000497871 FBLN1P23142 703 aa25.54■■□□□ 1.68
ATPAF2-209ENST00000497871 DCAF8L1A6NGE4 600 aa25.53■■□□□ 1.68
ATPAF2-209ENST00000497871 DDX54Q8TDD1 881 aaKnown RBP25.53■■□□□ 1.68
ATPAF2-209ENST00000497871 FYB1O15117 783 aa25.52■■□□□ 1.68
ATPAF2-209ENST00000497871 ATF5Q9Y2D1 282 aaPredicted RBP25.51■■□□□ 1.67
ATPAF2-209ENST00000497871 USP47Q96K76 1375 aa25.51■■□□□ 1.67
ATPAF2-209ENST00000497871 PTGER2P43116 358 aa25.5■■□□□ 1.67
ATPAF2-209ENST00000497871 CDCA8Q53HL2 280 aa25.5■■□□□ 1.67
ATPAF2-209ENST00000497871 NHSQ6T4R5 1651 aa25.5■■□□□ 1.67
ATPAF2-209ENST00000497871 CASZ1Q86V15 1759 aa25.49■■□□□ 1.67
ATPAF2-209ENST00000497871 MTFR1LQ9H019 292 aa25.48■■□□□ 1.67
ATPAF2-209ENST00000497871 GGNBP2Q9H3C7 697 aa25.48■■□□□ 1.67
ATPAF2-209ENST00000497871 RRS1Q15050 365 aaKnown RBP25.46■■□□□ 1.67
ATPAF2-209ENST00000497871 ZCRB1Q8TBF4 217 aaKnown RBP25.46■■□□□ 1.67
ATPAF2-209ENST00000497871 YY1P25490 414 aa25.45■■□□□ 1.66
ATPAF2-209ENST00000497871 LRRC4BQ9NT99 713 aa25.45■■□□□ 1.66
ATPAF2-209ENST00000497871 TIMELESSQ9UNS1 1208 aa25.45■■□□□ 1.66
ATPAF2-209ENST00000497871 RTL1A6NKG5 1358 aa25.44■■□□□ 1.66
ATPAF2-209ENST00000497871 SLC27A3Q5K4L6 730 aa25.44■■□□□ 1.66
ATPAF2-209ENST00000497871 PRIM1P49642 420 aaKnown RBP25.43■■□□□ 1.66
ATPAF2-209ENST00000497871 NBPF6Q5VWK0 638 aa25.43■■□□□ 1.66
ATPAF2-209ENST00000497871 NBPF4Q96M43 638 aa25.43■■□□□ 1.66
ATPAF2-209ENST00000497871 FAM208AQ9UK61 1670 aaKnown RBP25.42■■□□□ 1.66
ATPAF2-209ENST00000497871 SGIP1Q9BQI5 828 aa25.42■■□□□ 1.66
ATPAF2-209ENST00000497871 SYTL4Q96C24 671 aaPredicted RBP25.41■■□□□ 1.66
ATPAF2-209ENST00000497871 CGNL1Q0VF96 1302 aa25.4■■□□□ 1.66
ATPAF2-209ENST00000497871 ZNF827Q17R98 1081 aa25.4■■□□□ 1.66
ATPAF2-209ENST00000497871 KAT6BQ8WYB5 2073 aa25.4■■□□□ 1.66
ATPAF2-209ENST00000497871 AKT1S1Q96B36 256 aa25.39■■□□□ 1.66
ATPAF2-209ENST00000497871 SYT17Q9BSW7 474 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms