RNA–Protein interactions for RNA: ENST00000497791.5

UMPS-209, Transcript of uridine monophosphate synthetase, human

TSL 1 (best)

Gene UMPS, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UMPS-209	ENST00000497791	MTHFS	P49914	203 aa		20.13	■□□□□ 0.81
UMPS-209	ENST00000497791	NRAP	Q86VF7	1730 aa		20.13	■□□□□ 0.81
UMPS-209	ENST00000497791	RGPD2	P0DJD1	1756 aa		20.13	■□□□□ 0.81
UMPS-209	ENST00000497791	ANP32C	O43423	234 aa		20.13	■□□□□ 0.81
UMPS-209	ENST00000497791	HOXC9	P31274	260 aa		20.13	■□□□□ 0.81
UMPS-209	ENST00000497791	MEX3C	Q5U5Q3	659 aa	Known RBP	20.13	■□□□□ 0.81
UMPS-209	ENST00000497791	HSP90AB2P	Q58FF8	381 aa		20.12	■□□□□ 0.81
UMPS-209	ENST00000497791	AMPH	P49418	695 aa		20.11	■□□□□ 0.81
UMPS-209	ENST00000497791	IP6K1	Q92551	441 aa		20.11	■□□□□ 0.81
UMPS-209	ENST00000497791	NWD2	Q9ULI1	1742 aa		20.11	■□□□□ 0.81
UMPS-209	ENST00000497791	SLIT2	O94813	1529 aa		20.1	■□□□□ 0.81
UMPS-209	ENST00000497791	BTG4	Q9NY30	223 aa		20.1	■□□□□ 0.81
UMPS-209	ENST00000497791	MYBBP1A	Q9BQG0	1328 aa	Known RBP	20.1	■□□□□ 0.81
UMPS-209	ENST00000497791	NGLY1	Q96IV0	654 aa		20.1	■□□□□ 0.81
UMPS-209	ENST00000497791	FLT4	P35916	1363 aa		20.1	■□□□□ 0.81
UMPS-209	ENST00000497791	CDK12	Q9NYV4	1490 aa	Predicted RBP	20.09	■□□□□ 0.81
UMPS-209	ENST00000497791	COL5A2	P05997	1499 aa	Predicted RBP	20.09	■□□□□ 0.81
UMPS-209	ENST00000497791	RTL1	A6NKG5	1358 aa		20.09	■□□□□ 0.81
UMPS-209	ENST00000497791	ABCC6	O95255	1503 aa		20.09	■□□□□ 0.81
UMPS-209	ENST00000497791	COL3A1	P02461	1466 aa	Predicted RBP	20.08	■□□□□ 0.81
UMPS-209	ENST00000497791	CCDC184	Q52MB2	194 aa		20.08	■□□□□ 0.81
UMPS-209	ENST00000497791	BCL9L	Q86UU0	1499 aa		20.08	■□□□□ 0.8
UMPS-209	ENST00000497791	LTV1	Q96GA3	475 aa	Predicted RBP	20.07	■□□□□ 0.8
UMPS-209	ENST00000497791	AFF2	P51816	1311 aa		20.07	■□□□□ 0.8
UMPS-209	ENST00000497791	INSR	P06213	1382 aa		20.06	■□□□□ 0.8
UMPS-209	ENST00000497791	MIER1	Q8N108	512 aa		20.06	■□□□□ 0.8
UMPS-209	ENST00000497791	FNBP4	Q8N3X1	1017 aa	Predicted RBP	20.06	■□□□□ 0.8
UMPS-209	ENST00000497791	STRN4	Q9NRL3	753 aa		20.06	■□□□□ 0.8
UMPS-209	ENST00000497791	KIF24	Q5T7B8	1368 aa		20.05	■□□□□ 0.8
UMPS-209	ENST00000497791	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	20.05	■□□□□ 0.8
UMPS-209	ENST00000497791	BLM	P54132	1417 aa	Predicted RBP	20.05	■□□□□ 0.8
UMPS-209	ENST00000497791	ANKRD24	Q8TF21	1146 aa		20.05	■□□□□ 0.8
UMPS-209	ENST00000497791	ERBB3	P21860	1342 aa		20.04	■□□□□ 0.8
UMPS-209	ENST00000497791	EIF4A2	Q14240	407 aa	Known RBP	20.03	■□□□□ 0.8
UMPS-209	ENST00000497791	LARP1	Q6PKG0	1096 aa	Known RBP	20.03	■□□□□ 0.8
UMPS-209	ENST00000497791	USP21	Q9UK80	565 aa		20.03	■□□□□ 0.8
UMPS-209	ENST00000497791	RGPD1	P0DJD0	1748 aa		20.01	■□□□□ 0.79
UMPS-209	ENST00000497791	UNC5CL	Q8IV45	518 aa		20.01	■□□□□ 0.79
UMPS-209	ENST00000497791	RGS17	Q9UGC6	210 aa	Predicted RBP	20.01	■□□□□ 0.79
UMPS-209	ENST00000497791	IL13	P35225	146 aa		20	■□□□□ 0.79
UMPS-209	ENST00000497791	FAM208A	Q9UK61	1670 aa	Known RBP	20	■□□□□ 0.79
UMPS-209	ENST00000497791	EVA1C	P58658	441 aa		20	■□□□□ 0.79
UMPS-209	ENST00000497791	WDR17	Q8IZU2	1322 aa		20	■□□□□ 0.79
UMPS-209	ENST00000497791	USHBP1	Q8N6Y0	703 aa		19.99	■□□□□ 0.79
UMPS-209	ENST00000497791	CSB-PGBD3	P0DP91	1061 aa		19.98	■□□□□ 0.79
UMPS-209	ENST00000497791	NBPF6	Q5VWK0	638 aa		19.98	■□□□□ 0.79
UMPS-209	ENST00000497791	NBPF4	Q96M43	638 aa		19.98	■□□□□ 0.79
UMPS-209	ENST00000497791	DIAPH1	O60610	1272 aa	Known RBP	19.97	■□□□□ 0.79
UMPS-209	ENST00000497791	CFAP53	Q96M91	514 aa		19.97	■□□□□ 0.79
UMPS-209	ENST00000497791	EYA1	Q99502	592 aa		19.97	■□□□□ 0.79
UMPS-209	ENST00000497791	NLRP2	Q9NX02	1062 aa		19.97	■□□□□ 0.79
UMPS-209	ENST00000497791	ATRN	O75882	1429 aa		19.96	■□□□□ 0.79
UMPS-209	ENST00000497791	GLI3	P10071	1580 aa		19.96	■□□□□ 0.79
UMPS-209	ENST00000497791	TOM1L2	Q6ZVM7	507 aa		19.96	■□□□□ 0.79
UMPS-209	ENST00000497791	USP35	Q9P2H5	1018 aa		19.96	■□□□□ 0.79
UMPS-209	ENST00000497791	CRB1	P82279	1406 aa		19.96	■□□□□ 0.79
UMPS-209	ENST00000497791	WNK3	Q9BYP7	1800 aa		19.95	■□□□□ 0.78
UMPS-209	ENST00000497791	VPS72	Q15906	364 aa		19.94	■□□□□ 0.78
UMPS-209	ENST00000497791	AEBP1	Q8IUX7	1158 aa		19.94	■□□□□ 0.78
UMPS-209	ENST00000497791	SPATA31A5	Q5VU36	1347 aa		19.94	■□□□□ 0.78
UMPS-209	ENST00000497791	SPATA31A7	Q8IWB4	1347 aa		19.94	■□□□□ 0.78
UMPS-209	ENST00000497791	QTRT2	Q9H974	415 aa	Known RBP	19.94	■□□□□ 0.78
UMPS-209	ENST00000497791	MRS2	Q9HD23	443 aa		19.94	■□□□□ 0.78
UMPS-209	ENST00000497791	CCDC9	Q9Y3X0	531 aa	Known RBP	19.94	■□□□□ 0.78
UMPS-209	ENST00000497791	U2SURP	O15042	1029 aa	Known RBP	19.93	■□□□□ 0.78
UMPS-209	ENST00000497791	CARD10	Q9BWT7	1032 aa		19.93	■□□□□ 0.78
UMPS-209	ENST00000497791	SPATA31A1	Q5TZJ5	1347 aa		19.92	■□□□□ 0.78
UMPS-209	ENST00000497791	IGSF1	Q8N6C5	1336 aa		19.92	■□□□□ 0.78
UMPS-209	ENST00000497791	NCAPD2	Q15021	1401 aa		19.92	■□□□□ 0.78
UMPS-209	ENST00000497791	POTEA	Q6S8J7	498 aa		19.92	■□□□□ 0.78
UMPS-209	ENST00000497791	HMOX1	P09601	288 aa		19.91	■□□□□ 0.78
UMPS-209	ENST00000497791	TRPC5	Q9UL62	973 aa	Predicted RBP	19.91	■□□□□ 0.78
UMPS-209	ENST00000497791	ZNF772	Q68DY9	489 aa	Predicted RBP	19.91	■□□□□ 0.78
UMPS-209	ENST00000497791	SULT6B1	Q6IMI4	303 aa		19.9	■□□□□ 0.78
UMPS-209	ENST00000497791	GJD4	Q96KN9	370 aa	Predicted RBP	19.89	■□□□□ 0.77
UMPS-209	ENST00000497791	MEGF6	O75095	1541 aa		19.89	■□□□□ 0.77
UMPS-209	ENST00000497791	U2AF1L5	P0DN76	240 aa	Predicted RBP	19.88	■□□□□ 0.77
UMPS-209	ENST00000497791	U2AF1	Q01081	240 aa	Known RBP eCLIP	19.88	■□□□□ 0.77
UMPS-209	ENST00000497791	CCER2	I3L3R5	266 aa		19.87	■□□□□ 0.77
UMPS-209	ENST00000497791	FAM98C	Q17RN3	349 aa	Known RBP	19.87	■□□□□ 0.77
UMPS-209	ENST00000497791	PNISR	Q8TF01	805 aa	Known RBP	19.87	■□□□□ 0.77
UMPS-209	ENST00000497791	KDR	P35968	1356 aa		19.87	■□□□□ 0.77
UMPS-209	ENST00000497791	TCP11L2	Q8N4U5	519 aa		19.87	■□□□□ 0.77
UMPS-209	ENST00000497791	DISP2	A7MBM2	1401 aa		19.86	■□□□□ 0.77
UMPS-209	ENST00000497791	NUDC	Q9Y266	331 aa		19.86	■□□□□ 0.77
UMPS-209	ENST00000497791	ADAMTS8	Q9UP79	889 aa		19.85	■□□□□ 0.77
UMPS-209	ENST00000497791	THSD7A	Q9UPZ6	1657 aa		19.85	■□□□□ 0.77
UMPS-209	ENST00000497791	SHANK3	Q9BYB0	1731 aa		19.85	■□□□□ 0.77
UMPS-209	ENST00000497791	RSPH6A	Q9H0K4	717 aa		19.84	■□□□□ 0.77
UMPS-209	ENST00000497791	PARP4	Q9UKK3	1724 aa	Known RBP	19.84	■□□□□ 0.77
UMPS-209	ENST00000497791	BRWD3	Q6RI45	1802 aa		19.84	■□□□□ 0.77
UMPS-209	ENST00000497791	EP400	Q96L91	3159 aa		19.83	■□□□□ 0.77
UMPS-209	ENST00000497791	WDR43	Q15061	677 aa	Known RBP eCLIP	19.83	■□□□□ 0.76
UMPS-209	ENST00000497791	LRRC37A3	O60309	1634 aa		19.83	■□□□□ 0.76
UMPS-209	ENST00000497791	THRAP3	Q9Y2W1	955 aa	Known RBP	19.82	■□□□□ 0.76
UMPS-209	ENST00000497791	PKD1L3	Q7Z443	1732 aa		19.82	■□□□□ 0.76
UMPS-209	ENST00000497791	RBM6	P78332	1123 aa	Known RBP	19.81	■□□□□ 0.76
UMPS-209	ENST00000497791	BARGIN	Q6ZT62	677 aa		19.81	■□□□□ 0.76
UMPS-209	ENST00000497791	FAM9B	Q8IZU0	186 aa		19.81	■□□□□ 0.76
UMPS-209	ENST00000497791	IL2RB	P14784	551 aa		19.81	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms