RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 RNF25Q96BH1 459 aaPredicted RBP21.97■■□□□ 1.11
TNRC18-210ENST00000497663 NBPF8Q3BBV2 869 aa21.96■■□□□ 1.11
TNRC18-210ENST00000497663 L3MBTL2Q969R5 705 aa21.96■■□□□ 1.11
TNRC18-210ENST00000497663 BLMP54132 1417 aaPredicted RBP21.96■■□□□ 1.11
TNRC18-210ENST00000497663 TOPAZ1Q8N9V7 1692 aa21.95■■□□□ 1.1
TNRC18-210ENST00000497663 KRT27Q7Z3Y8 459 aa21.95■■□□□ 1.1
TNRC18-210ENST00000497663 POLR3AO14802 1390 aaPredicted RBP21.95■■□□□ 1.1
TNRC18-210ENST00000497663 KIAA0232Q92628 1395 aa21.95■■□□□ 1.1
TNRC18-210ENST00000497663 COL14A1Q05707 1796 aaKnown RBP21.94■■□□□ 1.1
TNRC18-210ENST00000497663 CLCN6P51797 869 aa21.94■■□□□ 1.1
TNRC18-210ENST00000497663 ZC3H6P61129 1189 aaKnown RBP21.94■■□□□ 1.1
TNRC18-210ENST00000497663 CCDC125Q86Z20 511 aa21.94■■□□□ 1.1
TNRC18-210ENST00000497663 CABP2Q9NPB3 220 aa21.94■■□□□ 1.1
TNRC18-210ENST00000497663 KIAA1210Q9ULL0 1709 aa21.94■■□□□ 1.1
TNRC18-210ENST00000497663 PLEKHG3A1L390 1219 aa21.93■■□□□ 1.1
TNRC18-210ENST00000497663 SPATA31A5Q5VU36 1347 aa21.93■■□□□ 1.1
TNRC18-210ENST00000497663 SPATA31A7Q8IWB4 1347 aa21.93■■□□□ 1.1
TNRC18-210ENST00000497663 PRDM11Q9NQV5 511 aa21.93■■□□□ 1.1
TNRC18-210ENST00000497663 TAOK2Q9UL54 1235 aa21.93■■□□□ 1.1
TNRC18-210ENST00000497663 A0A0G2JS52 829 aa21.92■■□□□ 1.1
TNRC18-210ENST00000497663 MYT1Q01538 1121 aa21.92■■□□□ 1.1
TNRC18-210ENST00000497663 ITSN1Q15811 1721 aa21.91■■□□□ 1.1
TNRC18-210ENST00000497663 PHRF1Q9P1Y6 1649 aaKnown RBP21.9■■□□□ 1.1
TNRC18-210ENST00000497663 CENPJQ9HC77 1338 aaPredicted RBP21.89■■□□□ 1.1
TNRC18-210ENST00000497663 STRN4Q9NRL3 753 aa21.88■■□□□ 1.09
TNRC18-210ENST00000497663 PCDHB8Q9UN66 801 aa21.88■■□□□ 1.09
TNRC18-210ENST00000497663 SRPK2P78362 688 aaKnown RBP21.87■■□□□ 1.09
TNRC18-210ENST00000497663 NEUROD1Q13562 356 aa21.87■■□□□ 1.09
TNRC18-210ENST00000497663 IFNL1Q8IU54 200 aa21.87■■□□□ 1.09
TNRC18-210ENST00000497663 PPIP5K1Q6PFW1 1433 aa21.87■■□□□ 1.09
TNRC18-210ENST00000497663 SPATA31A1Q5TZJ5 1347 aa21.86■■□□□ 1.09
TNRC18-210ENST00000497663 MS4A3Q96HJ5 214 aa21.86■■□□□ 1.09
TNRC18-210ENST00000497663 THSD7AQ9UPZ6 1657 aa21.85■■□□□ 1.09
TNRC18-210ENST00000497663 ABTB2Q8N961 1025 aa21.85■■□□□ 1.09
TNRC18-210ENST00000497663 NRKQ7Z2Y5 1582 aa21.85■■□□□ 1.09
TNRC18-210ENST00000497663 CABP1Q9NZU7 370 aa21.84■■□□□ 1.09
TNRC18-210ENST00000497663 CAMTA1Q9Y6Y1 1673 aa21.84■■□□□ 1.09
TNRC18-210ENST00000497663 USP19O94966 1318 aa21.83■■□□□ 1.09
TNRC18-210ENST00000497663 USP35Q9P2H5 1018 aa21.83■■□□□ 1.09
TNRC18-210ENST00000497663 QRICH2Q9H0J4 1663 aa21.82■■□□□ 1.08
TNRC18-210ENST00000497663 LARP1Q6PKG0 1096 aaKnown RBP21.82■■□□□ 1.08
TNRC18-210ENST00000497663 EN1Q05925 392 aaPredicted RBP21.8■■□□□ 1.08
TNRC18-210ENST00000497663 SF3B2Q13435 895 aaKnown RBP21.8■■□□□ 1.08
TNRC18-210ENST00000497663 SSH2Q76I76 1423 aa21.8■■□□□ 1.08
TNRC18-210ENST00000497663 PSDA5PKW4 1024 aaPredicted RBP21.79■■□□□ 1.08
TNRC18-210ENST00000497663 GCP02774 474 aa21.79■■□□□ 1.08
TNRC18-210ENST00000497663 TRPM1Q7Z4N2 1603 aa21.79■■□□□ 1.08
TNRC18-210ENST00000497663 PDAP1Q13442 181 aaKnown RBP21.78■■□□□ 1.08
TNRC18-210ENST00000497663 SP7Q8TDD2 431 aaPredicted RBP21.78■■□□□ 1.08
TNRC18-210ENST00000497663 LMO7Q8WWI1 1683 aa21.78■■□□□ 1.08
TNRC18-210ENST00000497663 GALR2O43603 387 aaPredicted RBP21.77■■□□□ 1.08
TNRC18-210ENST00000497663 USP6P35125 1406 aa21.77■■□□□ 1.08
TNRC18-210ENST00000497663 CPDO75976 1380 aa21.76■■□□□ 1.07
TNRC18-210ENST00000497663 GABBR2O75899 941 aa21.75■■□□□ 1.07
TNRC18-210ENST00000497663 EVA1CP58658 441 aa21.75■■□□□ 1.07
TNRC18-210ENST00000497663 ZBTB7CA1YPR0 619 aa21.74■■□□□ 1.07
TNRC18-210ENST00000497663 ROCK2O75116 1388 aaKnown RBP21.74■■□□□ 1.07
TNRC18-210ENST00000497663 TRIM37O94972 964 aa21.73■■□□□ 1.07
TNRC18-210ENST00000497663 BAG6P46379 1132 aa21.73■■□□□ 1.07
TNRC18-210ENST00000497663 NLRP6P59044 892 aa21.73■■□□□ 1.07
TNRC18-210ENST00000497663 EZH2Q15910 746 aaKnown RBP21.73■■□□□ 1.07
TNRC18-210ENST00000497663 NLRP13Q86W25 1043 aa21.73■■□□□ 1.07
TNRC18-210ENST00000497663 TNS1Q9HBL0 1735 aaKnown RBP21.72■■□□□ 1.07
TNRC18-210ENST00000497663 COL5A2P05997 1499 aaPredicted RBP21.71■■□□□ 1.07
TNRC18-210ENST00000497663 PSEN1P49768 467 aa21.71■■□□□ 1.07
TNRC18-210ENST00000497663 BARGINQ6ZT62 677 aa21.71■■□□□ 1.07
TNRC18-210ENST00000497663 AXIN2Q9Y2T1 843 aa21.71■■□□□ 1.07
TNRC18-210ENST00000497663 PIK3C2AO00443 1686 aa21.71■■□□□ 1.07
TNRC18-210ENST00000497663 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.7■■□□□ 1.06
TNRC18-210ENST00000497663 ZFP91Q96JP5 570 aaPredicted RBP21.7■■□□□ 1.06
TNRC18-210ENST00000497663 EVC2Q86UK5 1308 aa21.7■■□□□ 1.06
TNRC18-210ENST00000497663 SLIT3O75094 1523 aa21.7■■□□□ 1.06
TNRC18-210ENST00000497663 TCP11L2Q8N4U5 519 aa21.69■■□□□ 1.06
TNRC18-210ENST00000497663 RGPD1P0DJD0 1748 aa21.69■■□□□ 1.06
TNRC18-210ENST00000497663 CAMKK2Q96RR4 588 aa21.68■■□□□ 1.06
TNRC18-210ENST00000497663 TTC21BQ7Z4L5 1316 aa21.68■■□□□ 1.06
TNRC18-210ENST00000497663 DISP2A7MBM2 1401 aa21.67■■□□□ 1.06
TNRC18-210ENST00000497663 SOX12O15370 315 aa21.67■■□□□ 1.06
TNRC18-210ENST00000497663 STK25O00506 426 aa21.66■■□□□ 1.06
TNRC18-210ENST00000497663 R3HDM1Q15032 1099 aaKnown RBP21.66■■□□□ 1.06
TNRC18-210ENST00000497663 FAM196AQ6ZSG2 479 aa21.66■■□□□ 1.06
TNRC18-210ENST00000497663 COL18A1P39060 1754 aa21.66■■□□□ 1.06
TNRC18-210ENST00000497663 BRD4O60885 1362 aaPredicted RBP21.64■■□□□ 1.06
TNRC18-210ENST00000497663 AATKQ6ZMQ8 1374 aa21.64■■□□□ 1.06
TNRC18-210ENST00000497663 APBA3O96018 575 aa21.64■■□□□ 1.05
TNRC18-210ENST00000497663 PDE3BQ13370 1112 aa21.64■■□□□ 1.05
TNRC18-210ENST00000497663 PTF1AQ7RTS3 328 aa21.64■■□□□ 1.05
TNRC18-210ENST00000497663 CPSF1Q10570 1443 aaKnown RBP21.63■■□□□ 1.05
TNRC18-210ENST00000497663 TRPC6Q9Y210 931 aa21.63■■□□□ 1.05
TNRC18-210ENST00000497663 HS6ST3Q8IZP7 471 aa21.62■■□□□ 1.05
TNRC18-210ENST00000497663 CRB1P82279 1406 aa21.62■■□□□ 1.05
TNRC18-210ENST00000497663 CD163L1Q9NR16 1453 aa21.61■■□□□ 1.05
TNRC18-210ENST00000497663 TIE1P35590 1138 aa21.61■■□□□ 1.05
TNRC18-210ENST00000497663 ARHGEF25Q86VW2 580 aa21.61■■□□□ 1.05
TNRC18-210ENST00000497663 AKAP12Q02952 1782 aa21.61■■□□□ 1.05
TNRC18-210ENST00000497663 CARD11Q9BXL7 1154 aa21.6■■□□□ 1.05
TNRC18-210ENST00000497663 BCL11BQ9C0K0 894 aaPredicted RBP21.59■■□□□ 1.05
TNRC18-210ENST00000497663 THRAP3Q9Y2W1 955 aaKnown RBP21.59■■□□□ 1.05
TNRC18-210ENST00000497663 KTN1Q86UP2 1357 aaKnown RBP21.59■■□□□ 1.05
TNRC18-210ENST00000497663 TOM1L2Q6ZVM7 507 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms