RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 MAP3K19Q56UN5 1328 aa22.21■■□□□ 1.15
FAM3A-220ENST00000497506 COL5A2P05997 1499 aaPredicted RBP22.21■■□□□ 1.15
FAM3A-220ENST00000497506 RXRBP28702 533 aa22.2■■□□□ 1.14
FAM3A-220ENST00000497506 RBM6P78332 1123 aaKnown RBP22.2■■□□□ 1.14
FAM3A-220ENST00000497506 ILDR2Q71H61 639 aa22.2■■□□□ 1.14
FAM3A-220ENST00000497506 GJD4Q96KN9 370 aaPredicted RBP22.2■■□□□ 1.14
FAM3A-220ENST00000497506 GLI3P10071 1580 aa22.2■■□□□ 1.14
FAM3A-220ENST00000497506 RRS1Q15050 365 aaKnown RBP22.19■■□□□ 1.14
FAM3A-220ENST00000497506 STRN4Q9NRL3 753 aa22.19■■□□□ 1.14
FAM3A-220ENST00000497506 MAP2P11137 1827 aaKnown RBP22.18■■□□□ 1.14
FAM3A-220ENST00000497506 EVA1CP58658 441 aa22.18■■□□□ 1.14
FAM3A-220ENST00000497506 NPC1L1Q9UHC9 1359 aa22.17■■□□□ 1.14
FAM3A-220ENST00000497506 IP6K1Q92551 441 aa22.17■■□□□ 1.14
FAM3A-220ENST00000497506 PEAK1Q9H792 1746 aa22.17■■□□□ 1.14
FAM3A-220ENST00000497506 SPATA31A5Q5VU36 1347 aa22.16■■□□□ 1.14
FAM3A-220ENST00000497506 SPATA31A7Q8IWB4 1347 aa22.16■■□□□ 1.14
FAM3A-220ENST00000497506 LARP1Q6PKG0 1096 aaKnown RBP22.16■■□□□ 1.14
FAM3A-220ENST00000497506 MORC1Q86VD1 984 aa22.16■■□□□ 1.14
FAM3A-220ENST00000497506 HOXC9P31274 260 aa22.15■■□□□ 1.14
FAM3A-220ENST00000497506 CCDC9Q9Y3X0 531 aaKnown RBP22.15■■□□□ 1.14
FAM3A-220ENST00000497506 BLMP54132 1417 aaPredicted RBP22.14■■□□□ 1.14
FAM3A-220ENST00000497506 RTL1A6NKG5 1358 aa22.14■■□□□ 1.14
FAM3A-220ENST00000497506 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.13
FAM3A-220ENST00000497506 AMPHP49418 695 aa22.14■■□□□ 1.13
FAM3A-220ENST00000497506 CC2D1BQ5T0F9 858 aaKnown RBP22.14■■□□□ 1.13
FAM3A-220ENST00000497506 CDK12Q9NYV4 1490 aaPredicted RBP22.14■■□□□ 1.13
FAM3A-220ENST00000497506 SPATA31A1Q5TZJ5 1347 aa22.13■■□□□ 1.13
FAM3A-220ENST00000497506 WDR17Q8IZU2 1322 aa22.13■■□□□ 1.13
FAM3A-220ENST00000497506 DDX10Q13206 875 aaKnown RBP22.13■■□□□ 1.13
FAM3A-220ENST00000497506 POLKQ9UBT6 870 aa22.13■■□□□ 1.13
FAM3A-220ENST00000497506 EMILIN1Q9Y6C2 1016 aa22.13■■□□□ 1.13
FAM3A-220ENST00000497506 KIF24Q5T7B8 1368 aa22.12■■□□□ 1.13
FAM3A-220ENST00000497506 ZNF316A6NFI3 1004 aaPredicted RBP22.12■■□□□ 1.13
FAM3A-220ENST00000497506 CRB1P82279 1406 aa22.12■■□□□ 1.13
FAM3A-220ENST00000497506 ERBB3P21860 1342 aa22.11■■□□□ 1.13
FAM3A-220ENST00000497506 RGS12O14924 1447 aa22.11■■□□□ 1.13
FAM3A-220ENST00000497506 ONECUT3O60422 494 aaPredicted RBP22.1■■□□□ 1.13
FAM3A-220ENST00000497506 ANKRD24Q8TF21 1146 aa22.1■■□□□ 1.13
FAM3A-220ENST00000497506 FLT4P35916 1363 aa22.1■■□□□ 1.13
FAM3A-220ENST00000497506 TOM1L2Q6ZVM7 507 aa22.09■■□□□ 1.13
FAM3A-220ENST00000497506 CSB-PGBD3P0DP91 1061 aa22.08■■□□□ 1.13
FAM3A-220ENST00000497506 CNGB1Q14028 1251 aaPredicted RBP22.08■■□□□ 1.13
FAM3A-220ENST00000497506 HSP90AB2PQ58FF8 381 aa22.08■■□□□ 1.13
FAM3A-220ENST00000497506 USP35Q9P2H5 1018 aa22.08■■□□□ 1.13
FAM3A-220ENST00000497506 INSRP06213 1382 aa22.08■■□□□ 1.12
FAM3A-220ENST00000497506 SMG6Q86US8 1419 aaKnown RBP22.07■■□□□ 1.12
FAM3A-220ENST00000497506 FAM98CQ17RN3 349 aaKnown RBP22.07■■□□□ 1.12
FAM3A-220ENST00000497506 FAM208AQ9UK61 1670 aaKnown RBP22.07■■□□□ 1.12
FAM3A-220ENST00000497506 PPM1GO15355 546 aaPredicted RBP22.06■■□□□ 1.12
FAM3A-220ENST00000497506 TCP11L2Q8N4U5 519 aa22.06■■□□□ 1.12
FAM3A-220ENST00000497506 LTV1Q96GA3 475 aaPredicted RBP22.06■■□□□ 1.12
FAM3A-220ENST00000497506 CARD10Q9BWT7 1032 aa22.06■■□□□ 1.12
FAM3A-220ENST00000497506 THSD7AQ9UPZ6 1657 aa22.06■■□□□ 1.12
FAM3A-220ENST00000497506 RGPD2P0DJD1 1756 aa22.05■■□□□ 1.12
FAM3A-220ENST00000497506 BARGINQ6ZT62 677 aa22.05■■□□□ 1.12
FAM3A-220ENST00000497506 THRAP3Q9Y2W1 955 aaKnown RBP22.05■■□□□ 1.12
FAM3A-220ENST00000497506 BRWD3Q6RI45 1802 aa22.04■■□□□ 1.12
FAM3A-220ENST00000497506 NLRP2Q9NX02 1062 aa22.04■■□□□ 1.12
FAM3A-220ENST00000497506 WNK3Q9BYP7 1800 aa22.03■■□□□ 1.12
FAM3A-220ENST00000497506 SEPT12Q8IYM1 358 aa22.03■■□□□ 1.12
FAM3A-220ENST00000497506 MTHFSP49914 203 aa21.99■■□□□ 1.11
FAM3A-220ENST00000497506 NBPF6Q5VWK0 638 aa21.99■■□□□ 1.11
FAM3A-220ENST00000497506 NBPF4Q96M43 638 aa21.99■■□□□ 1.11
FAM3A-220ENST00000497506 PARP4Q9UKK3 1724 aaKnown RBP21.99■■□□□ 1.11
FAM3A-220ENST00000497506 DISP2A7MBM2 1401 aa21.98■■□□□ 1.11
FAM3A-220ENST00000497506 PARD3Q8TEW0 1356 aa21.98■■□□□ 1.11
FAM3A-220ENST00000497506 A0A0G2JS52 829 aa21.97■■□□□ 1.11
FAM3A-220ENST00000497506 MYT1Q01538 1121 aa21.97■■□□□ 1.11
FAM3A-220ENST00000497506 EIF4A2Q14240 407 aaKnown RBP21.97■■□□□ 1.11
FAM3A-220ENST00000497506 PPP2R1AP30153 589 aa21.95■■□□□ 1.1
FAM3A-220ENST00000497506 LRRC37A3O60309 1634 aa21.95■■□□□ 1.1
FAM3A-220ENST00000497506 USHBP1Q8N6Y0 703 aa21.94■■□□□ 1.1
FAM3A-220ENST00000497506 CDCA7Q9BWT1 371 aaPredicted RBP21.94■■□□□ 1.1
FAM3A-220ENST00000497506 NCAPD2Q15021 1401 aa21.93■■□□□ 1.1
FAM3A-220ENST00000497506 KRT27Q7Z3Y8 459 aa21.93■■□□□ 1.1
FAM3A-220ENST00000497506 EYA1Q99502 592 aa21.93■■□□□ 1.1
FAM3A-220ENST00000497506 IL2RBP14784 551 aa21.92■■□□□ 1.1
FAM3A-220ENST00000497506 IL13P35225 146 aa21.91■■□□□ 1.1
FAM3A-220ENST00000497506 COL3A1P02461 1466 aaPredicted RBP21.9■■□□□ 1.1
FAM3A-220ENST00000497506 RGPD1P0DJD0 1748 aa21.9■■□□□ 1.1
FAM3A-220ENST00000497506 RALBP1Q15311 655 aa21.9■■□□□ 1.1
FAM3A-220ENST00000497506 DDB1Q16531 1140 aa21.89■■□□□ 1.09
FAM3A-220ENST00000497506 MEGF6O75095 1541 aa21.89■■□□□ 1.09
FAM3A-220ENST00000497506 IGSF1Q8N6C5 1336 aa21.88■■□□□ 1.09
FAM3A-220ENST00000497506 EXOC5O00471 708 aa21.87■■□□□ 1.09
FAM3A-220ENST00000497506 PDE3BQ13370 1112 aa21.87■■□□□ 1.09
FAM3A-220ENST00000497506 TNS2Q63HR2 1409 aa21.87■■□□□ 1.09
FAM3A-220ENST00000497506 SOCS7O14512 581 aa21.86■■□□□ 1.09
FAM3A-220ENST00000497506 DIAPH1O60610 1272 aaKnown RBP21.86■■□□□ 1.09
FAM3A-220ENST00000497506 FAM182BQ5T319 152 aa21.86■■□□□ 1.09
FAM3A-220ENST00000497506 RAPGEF4Q8WZA2 1011 aa21.85■■□□□ 1.09
FAM3A-220ENST00000497506 PRKRIP1Q9H875 184 aaPredicted RBP21.85■■□□□ 1.09
FAM3A-220ENST00000497506 OVOS2A0A0G2JMS6 1433 aa21.85■■□□□ 1.09
FAM3A-220ENST00000497506 SHANK3Q9BYB0 1731 aa21.84■■□□□ 1.09
FAM3A-220ENST00000497506 MARCH10Q8NA82 808 aaPredicted RBP21.84■■□□□ 1.09
FAM3A-220ENST00000497506 CFAP53Q96M91 514 aa21.84■■□□□ 1.09
FAM3A-220ENST00000497506 TATP17735 454 aaPredicted RBP21.83■■□□□ 1.09
FAM3A-220ENST00000497506 MYBBP1AQ9BQG0 1328 aaKnown RBP21.81■■□□□ 1.08
FAM3A-220ENST00000497506 AEBP1Q8IUX7 1158 aa21.81■■□□□ 1.08
FAM3A-220ENST00000497506 ZCRB1Q8TBF4 217 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms