RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 ABTB2Q8N961 1025 aa13.29□□□□□ -0.28
TCTN3-206ENST00000497399 FBLN1P23142 703 aa13.28□□□□□ -0.28
TCTN3-206ENST00000497399 NLRP6P59044 892 aa13.28□□□□□ -0.28
TCTN3-206ENST00000497399 VPS72Q15906 364 aa13.28□□□□□ -0.28
TCTN3-206ENST00000497399 NUTM2GQ5VZR2 741 aa13.28□□□□□ -0.28
TCTN3-206ENST00000497399 SLIT3O75094 1523 aa13.28□□□□□ -0.28
TCTN3-206ENST00000497399 PHRF1Q9P1Y6 1649 aaKnown RBP13.28□□□□□ -0.28
TCTN3-206ENST00000497399 AATKQ6ZMQ8 1374 aa13.27□□□□□ -0.29
TCTN3-206ENST00000497399 BLMP54132 1417 aaPredicted RBP13.27□□□□□ -0.29
TCTN3-206ENST00000497399 THSD7AQ9UPZ6 1657 aa13.27□□□□□ -0.29
TCTN3-206ENST00000497399 TNS1Q9HBL0 1735 aaKnown RBP13.27□□□□□ -0.29
TCTN3-206ENST00000497399 DEFB132Q7Z7B7 95 aa13.26□□□□□ -0.29
TCTN3-206ENST00000497399 SMG6Q86US8 1419 aaKnown RBP13.26□□□□□ -0.29
TCTN3-206ENST00000497399 SEPT12Q8IYM1 358 aa13.26□□□□□ -0.29
TCTN3-206ENST00000497399 MRS2Q9HD23 443 aa13.26□□□□□ -0.29
TCTN3-206ENST00000497399 LTN1O94822 1766 aa13.25□□□□□ -0.29
TCTN3-206ENST00000497399 PEAK1Q9H792 1746 aa13.25□□□□□ -0.29
TCTN3-206ENST00000497399 NFAT5O94916 1531 aa13.25□□□□□ -0.29
TCTN3-206ENST00000497399 USP19O94966 1318 aa13.25□□□□□ -0.29
TCTN3-206ENST00000497399 MTHFSP49914 203 aa13.24□□□□□ -0.29
TCTN3-206ENST00000497399 LMOD2Q6P5Q4 547 aa13.24□□□□□ -0.29
TCTN3-206ENST00000497399 POLKQ9UBT6 870 aa13.24□□□□□ -0.29
TCTN3-206ENST00000497399 RGPD1P0DJD0 1748 aa13.24□□□□□ -0.29
TCTN3-206ENST00000497399 LRP5O75197 1615 aa13.24□□□□□ -0.29
TCTN3-206ENST00000497399 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
TCTN3-206ENST00000497399 ARHGEF10O15013 1369 aa13.23□□□□□ -0.29
TCTN3-206ENST00000497399 EMILIN1Q9Y6C2 1016 aa13.23□□□□□ -0.29
TCTN3-206ENST00000497399 SOX12O15370 315 aa13.22□□□□□ -0.29
TCTN3-206ENST00000497399 RRS1Q15050 365 aaKnown RBP13.22□□□□□ -0.29
TCTN3-206ENST00000497399 PNISRQ8TF01 805 aaKnown RBP13.22□□□□□ -0.29
TCTN3-206ENST00000497399 INSRP06213 1382 aa13.21□□□□□ -0.29
TCTN3-206ENST00000497399 PLEKHG5O94827 1062 aa13.21□□□□□ -0.29
TCTN3-206ENST00000497399 MAP3K19Q56UN5 1328 aa13.2□□□□□ -0.3
TCTN3-206ENST00000497399 GCP02774 474 aa13.2□□□□□ -0.3
TCTN3-206ENST00000497399 KRT27Q7Z3Y8 459 aa13.2□□□□□ -0.3
TCTN3-206ENST00000497399 KCNH5Q8NCM2 988 aa13.2□□□□□ -0.3
TCTN3-206ENST00000497399 BTG4Q9NY30 223 aa13.2□□□□□ -0.3
TCTN3-206ENST00000497399 LMO7Q8WWI1 1683 aa13.19□□□□□ -0.3
TCTN3-206ENST00000497399 COL18A1P39060 1754 aa13.19□□□□□ -0.3
TCTN3-206ENST00000497399 RGPD5Q99666 1765 aa13.18□□□□□ -0.3
TCTN3-206ENST00000497399 SPATA31A5Q5VU36 1347 aa13.17□□□□□ -0.3
TCTN3-206ENST00000497399 SPATA31A7Q8IWB4 1347 aa13.17□□□□□ -0.3
TCTN3-206ENST00000497399 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
TCTN3-206ENST00000497399 FAM98CQ17RN3 349 aaKnown RBP13.17□□□□□ -0.3
TCTN3-206ENST00000497399 FAM182BQ5T319 152 aa13.17□□□□□ -0.3
TCTN3-206ENST00000497399 ARHGEF25Q86VW2 580 aa13.17□□□□□ -0.3
TCTN3-206ENST00000497399 FAM9BQ8IZU0 186 aa13.17□□□□□ -0.3
TCTN3-206ENST00000497399 CFAP53Q96M91 514 aa13.17□□□□□ -0.3
TCTN3-206ENST00000497399 KIF24Q5T7B8 1368 aa13.17□□□□□ -0.3
TCTN3-206ENST00000497399 SBF2Q86WG5 1849 aa13.16□□□□□ -0.3
TCTN3-206ENST00000497399 RREB1Q92766 1687 aa13.16□□□□□ -0.3
TCTN3-206ENST00000497399 RTL1A6NKG5 1358 aa13.16□□□□□ -0.3
TCTN3-206ENST00000497399 FLT4P35916 1363 aa13.16□□□□□ -0.3
TCTN3-206ENST00000497399 CAMTA1Q9Y6Y1 1673 aa13.15□□□□□ -0.3
TCTN3-206ENST00000497399 HOXC9P31274 260 aa13.15□□□□□ -0.3
TCTN3-206ENST00000497399 HAP1P54257 671 aaPredicted RBP13.15□□□□□ -0.3
TCTN3-206ENST00000497399 HSP90AB2PQ58FF8 381 aa13.15□□□□□ -0.3
TCTN3-206ENST00000497399 DIAPH1O60610 1272 aaKnown RBP13.14□□□□□ -0.31
TCTN3-206ENST00000497399 IL13P35225 146 aa13.14□□□□□ -0.31
TCTN3-206ENST00000497399 AMPHP49418 695 aa13.14□□□□□ -0.31
TCTN3-206ENST00000497399 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
TCTN3-206ENST00000497399 IP6K1Q92551 441 aa13.14□□□□□ -0.31
TCTN3-206ENST00000497399 CCDC9Q9Y3X0 531 aaKnown RBP13.14□□□□□ -0.31
TCTN3-206ENST00000497399 CPDO75976 1380 aa13.14□□□□□ -0.31
TCTN3-206ENST00000497399 DISP2A7MBM2 1401 aa13.13□□□□□ -0.31
TCTN3-206ENST00000497399 NUP188Q5SRE5 1749 aa13.13□□□□□ -0.31
TCTN3-206ENST00000497399 RGPD2P0DJD1 1756 aa13.13□□□□□ -0.31
TCTN3-206ENST00000497399 KIAA0232Q92628 1395 aa13.13□□□□□ -0.31
TCTN3-206ENST00000497399 ADAMTS8Q9UP79 889 aa13.13□□□□□ -0.31
TCTN3-206ENST00000497399 ABCC6O95255 1503 aa13.13□□□□□ -0.31
TCTN3-206ENST00000497399 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
TCTN3-206ENST00000497399 ZBTB7CA1YPR0 619 aa13.12□□□□□ -0.31
TCTN3-206ENST00000497399 EN1Q05925 392 aaPredicted RBP13.12□□□□□ -0.31
TCTN3-206ENST00000497399 EIF4A2Q14240 407 aaKnown RBP13.12□□□□□ -0.31
TCTN3-206ENST00000497399 WDR43Q15061 677 aaKnown RBP eCLIP13.12□□□□□ -0.31
TCTN3-206ENST00000497399 PARP4Q9UKK3 1724 aaKnown RBP13.12□□□□□ -0.31
TCTN3-206ENST00000497399 WNK3Q9BYP7 1800 aa13.11□□□□□ -0.31
TCTN3-206ENST00000497399 CHRNA2Q15822 529 aa13.11□□□□□ -0.31
TCTN3-206ENST00000497399 PSDA5PKW4 1024 aaPredicted RBP13.1□□□□□ -0.31
TCTN3-206ENST00000497399 NUDCQ9Y266 331 aa13.1□□□□□ -0.31
TCTN3-206ENST00000497399 AXIN2Q9Y2T1 843 aa13.1□□□□□ -0.31
TCTN3-206ENST00000497399 U2SURPO15042 1029 aaKnown RBP13.09□□□□□ -0.31
TCTN3-206ENST00000497399 YTHDC1Q96MU7 727 aaKnown RBP13.09□□□□□ -0.31
TCTN3-206ENST00000497399 CAMKK2Q96RR4 588 aa13.09□□□□□ -0.31
TCTN3-206ENST00000497399 U2AF1L5P0DN76 240 aaPredicted RBP13.08□□□□□ -0.32
TCTN3-206ENST00000497399 U2AF1Q01081 240 aaKnown RBP eCLIP13.08□□□□□ -0.32
TCTN3-206ENST00000497399 EZH2Q15910 746 aaKnown RBP13.08□□□□□ -0.32
TCTN3-206ENST00000497399 PRDM11Q9NQV5 511 aa13.08□□□□□ -0.32
TCTN3-206ENST00000497399 BAG6P46379 1132 aa13.07□□□□□ -0.32
TCTN3-206ENST00000497399 SF3B2Q13435 895 aaKnown RBP13.07□□□□□ -0.32
TCTN3-206ENST00000497399 LTV1Q96GA3 475 aaPredicted RBP13.07□□□□□ -0.32
TCTN3-206ENST00000497399 FAM208AQ9UK61 1670 aaKnown RBP13.07□□□□□ -0.32
TCTN3-206ENST00000497399 IGSF1Q8N6C5 1336 aa13.07□□□□□ -0.32
TCTN3-206ENST00000497399 BARGINQ6ZT62 677 aa13.06□□□□□ -0.32
TCTN3-206ENST00000497399 ANKRD24Q8TF21 1146 aa13.06□□□□□ -0.32
TCTN3-206ENST00000497399 EYA1Q99502 592 aa13.06□□□□□ -0.32
TCTN3-206ENST00000497399 ERBB3P21860 1342 aa13.06□□□□□ -0.32
TCTN3-206ENST00000497399 NCAPD2Q15021 1401 aa13.05□□□□□ -0.32
TCTN3-206ENST00000497399 HMOX1P09601 288 aa13.05□□□□□ -0.32
TCTN3-206ENST00000497399 LARP1Q6PKG0 1096 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms