RNA–Protein interactions for RNA: ENST00000496969.1

SF1-219, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-219ENST00000496969 SLC12A5Q9H2X9 1139 aa11.78□□□□□ -0.52
SF1-219ENST00000496969 THRAP3Q9Y2W1 955 aaKnown RBP11.78□□□□□ -0.52
SF1-219ENST00000496969 USP31Q70CQ4 1352 aa11.78□□□□□ -0.52
SF1-219ENST00000496969 RGPD5Q99666 1765 aa11.77□□□□□ -0.52
SF1-219ENST00000496969 BARGINQ6ZT62 677 aa11.77□□□□□ -0.53
SF1-219ENST00000496969 TCP11L2Q8N4U5 519 aa11.77□□□□□ -0.53
SF1-219ENST00000496969 ANKRD36BQ8N2N9 1353 aa11.77□□□□□ -0.53
SF1-219ENST00000496969 KIF20BQ96Q89 1820 aa11.76□□□□□ -0.53
SF1-219ENST00000496969 LRRC37A3O60309 1634 aa11.76□□□□□ -0.53
SF1-219ENST00000496969 CSB-PGBD3P0DP91 1061 aa11.76□□□□□ -0.53
SF1-219ENST00000496969 TOM1L2Q6ZVM7 507 aa11.76□□□□□ -0.53
SF1-219ENST00000496969 NME9Q86XW9 330 aa11.76□□□□□ -0.53
SF1-219ENST00000496969 TNS1Q9HBL0 1735 aaKnown RBP11.75□□□□□ -0.53
SF1-219ENST00000496969 PDE3BQ13370 1112 aa11.75□□□□□ -0.53
SF1-219ENST00000496969 ARHGEF25Q86VW2 580 aa11.75□□□□□ -0.53
SF1-219ENST00000496969 WDR17Q8IZU2 1322 aa11.75□□□□□ -0.53
SF1-219ENST00000496969 OVOS2A0A0J9YW53 1432 aa11.75□□□□□ -0.53
SF1-219ENST00000496969 OVOS2Q6IE36 1432 aa11.75□□□□□ -0.53
SF1-219ENST00000496969 MYOM1P52179 1685 aa11.75□□□□□ -0.53
SF1-219ENST00000496969 FAM208AQ9UK61 1670 aaKnown RBP11.75□□□□□ -0.53
SF1-219ENST00000496969 BAG6P46379 1132 aa11.74□□□□□ -0.53
SF1-219ENST00000496969 EP400Q96L91 3159 aa11.73□□□□□ -0.53
SF1-219ENST00000496969 COG3Q96JB2 828 aa11.73□□□□□ -0.53
SF1-219ENST00000496969 ZRANB1Q9UGI0 708 aa11.73□□□□□ -0.53
SF1-219ENST00000496969 CCDC7Q96M83 1385 aa11.72□□□□□ -0.53
SF1-219ENST00000496969 FAM196AQ6ZSG2 479 aa11.72□□□□□ -0.53
SF1-219ENST00000496969 C11orf95C9JLR9 678 aaPredicted RBP11.71□□□□□ -0.53
SF1-219ENST00000496969 FAM182BQ5T319 152 aa11.71□□□□□ -0.53
SF1-219ENST00000496969 DEFB132Q7Z7B7 95 aa11.71□□□□□ -0.53
SF1-219ENST00000496969 CDCA7Q9BWT1 371 aaPredicted RBP11.71□□□□□ -0.53
SF1-219ENST00000496969 OVOS2A0A0G2JMS6 1433 aa11.7□□□□□ -0.54
SF1-219ENST00000496969 EIF4G2P78344 907 aaKnown RBP eCLIP11.7□□□□□ -0.54
SF1-219ENST00000496969 DDB1Q16531 1140 aa11.7□□□□□ -0.54
SF1-219ENST00000496969 CARD10Q9BWT7 1032 aa11.7□□□□□ -0.54
SF1-219ENST00000496969 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
SF1-219ENST00000496969 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
SF1-219ENST00000496969 DISP2A7MBM2 1401 aa11.69□□□□□ -0.54
SF1-219ENST00000496969 ERBB3P21860 1342 aa11.68□□□□□ -0.54
SF1-219ENST00000496969 TRIM37O94972 964 aa11.68□□□□□ -0.54
SF1-219ENST00000496969 PEAK1Q9H792 1746 aa11.68□□□□□ -0.54
SF1-219ENST00000496969 TNS2Q63HR2 1409 aa11.68□□□□□ -0.54
SF1-219ENST00000496969 NSD3Q9BZ95 1437 aa11.68□□□□□ -0.54
SF1-219ENST00000496969 RTL1A6NKG5 1358 aa11.67□□□□□ -0.54
SF1-219ENST00000496969 ANKRD24Q8TF21 1146 aa11.67□□□□□ -0.54
SF1-219ENST00000496969 NLRP2Q9NX02 1062 aa11.67□□□□□ -0.54
SF1-219ENST00000496969 RREB1Q92766 1687 aa11.67□□□□□ -0.54
SF1-219ENST00000496969 SMG6Q86US8 1419 aaKnown RBP11.67□□□□□ -0.54
SF1-219ENST00000496969 PARD3Q8TEW0 1356 aa11.67□□□□□ -0.54
SF1-219ENST00000496969 ANKRD26Q9UPS8 1709 aa11.66□□□□□ -0.54
SF1-219ENST00000496969 AMPHP49418 695 aa11.66□□□□□ -0.54
SF1-219ENST00000496969 EN1Q05925 392 aaPredicted RBP11.66□□□□□ -0.54
SF1-219ENST00000496969 GGNBP2Q9H3C7 697 aa11.66□□□□□ -0.54
SF1-219ENST00000496969 RGPD3A6NKT7 1758 aaPredicted RBP11.66□□□□□ -0.54
SF1-219ENST00000496969 RGPD4Q7Z3J3 1758 aa11.66□□□□□ -0.54
SF1-219ENST00000496969 SBF2Q86WG5 1849 aa11.65□□□□□ -0.54
SF1-219ENST00000496969 APBA3O96018 575 aa11.65□□□□□ -0.54
SF1-219ENST00000496969 HSPA5P11021 654 aaKnown RBP11.65□□□□□ -0.54
SF1-219ENST00000496969 IP6K1Q92551 441 aa11.65□□□□□ -0.54
SF1-219ENST00000496969 MAP3K19Q56UN5 1328 aa11.64□□□□□ -0.55
SF1-219ENST00000496969 EXOC5O00471 708 aa11.64□□□□□ -0.55
SF1-219ENST00000496969 IL2RBP14784 551 aa11.64□□□□□ -0.55
SF1-219ENST00000496969 HOXC9P31274 260 aa11.64□□□□□ -0.55
SF1-219ENST00000496969 LTV1Q96GA3 475 aaPredicted RBP11.64□□□□□ -0.55
SF1-219ENST00000496969 NUP188Q5SRE5 1749 aa11.63□□□□□ -0.55
SF1-219ENST00000496969 NHSQ6T4R5 1651 aa11.63□□□□□ -0.55
SF1-219ENST00000496969 FYB1O15117 783 aa11.63□□□□□ -0.55
SF1-219ENST00000496969 CGNL1Q0VF96 1302 aa11.62□□□□□ -0.55
SF1-219ENST00000496969 RGPD2P0DJD1 1756 aa11.62□□□□□ -0.55
SF1-219ENST00000496969 EZH2Q15910 746 aaKnown RBP11.62□□□□□ -0.55
SF1-219ENST00000496969 FLT4P35916 1363 aa11.62□□□□□ -0.55
SF1-219ENST00000496969 KIF24Q5T7B8 1368 aa11.62□□□□□ -0.55
SF1-219ENST00000496969 BCL9O00512 1426 aa11.61□□□□□ -0.55
SF1-219ENST00000496969 RRS1Q15050 365 aaKnown RBP11.61□□□□□ -0.55
SF1-219ENST00000496969 MARCH10Q8NA82 808 aaPredicted RBP11.6□□□□□ -0.55
SF1-219ENST00000496969 LRP5O75197 1615 aa11.6□□□□□ -0.55
SF1-219ENST00000496969 PSDA5PKW4 1024 aaPredicted RBP11.59□□□□□ -0.55
SF1-219ENST00000496969 NBPF14Q5TI25 921 aa11.59□□□□□ -0.55
SF1-219ENST00000496969 CAMKK2Q96RR4 588 aa11.59□□□□□ -0.55
SF1-219ENST00000496969 CARD14Q9BXL6 1004 aa11.59□□□□□ -0.55
SF1-219ENST00000496969 BCL11BQ9C0K0 894 aaPredicted RBP11.59□□□□□ -0.55
SF1-219ENST00000496969 NSD2O96028 1365 aa11.58□□□□□ -0.56
SF1-219ENST00000496969 INSRP06213 1382 aa11.58□□□□□ -0.56
SF1-219ENST00000496969 FBLN1P23142 703 aa11.58□□□□□ -0.56
SF1-219ENST00000496969 MAP2P11137 1827 aaKnown RBP11.58□□□□□ -0.56
SF1-219ENST00000496969 DOT1LQ8TEK3 1739 aa11.57□□□□□ -0.56
SF1-219ENST00000496969 SHANK3Q9BYB0 1731 aa11.57□□□□□ -0.56
SF1-219ENST00000496969 PPM1GO15355 546 aaPredicted RBP11.56□□□□□ -0.56
SF1-219ENST00000496969 R3HDM1Q15032 1099 aaKnown RBP11.56□□□□□ -0.56
SF1-219ENST00000496969 RAPGEF4Q8WZA2 1011 aa11.56□□□□□ -0.56
SF1-219ENST00000496969 PANK3Q9H999 370 aa11.56□□□□□ -0.56
SF1-219ENST00000496969 BTAF1O14981 1849 aa11.56□□□□□ -0.56
SF1-219ENST00000496969 MEGF6O75095 1541 aa11.55□□□□□ -0.56
SF1-219ENST00000496969 PLSCR1O15162 318 aa11.55□□□□□ -0.56
SF1-219ENST00000496969 EMILIN1Q9Y6C2 1016 aa11.55□□□□□ -0.56
SF1-219ENST00000496969 TATP17735 454 aaPredicted RBP11.54□□□□□ -0.56
SF1-219ENST00000496969 HSP90AB2PQ58FF8 381 aa11.54□□□□□ -0.56
SF1-219ENST00000496969 USHBP1Q8N6Y0 703 aa11.54□□□□□ -0.56
SF1-219ENST00000496969 DDX54Q8TDD1 881 aaKnown RBP11.54□□□□□ -0.56
SF1-219ENST00000496969 ACSBG1Q96GR2 724 aa11.54□□□□□ -0.56
SF1-219ENST00000496969 PKD1L3Q7Z443 1732 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms