RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 ZIC2O95409 532 aaPredicted RBP11.98□□□□□ -0.49
MDM2-220ENST00000496959 CCDC116Q8IYX3 515 aa11.98□□□□□ -0.49
MDM2-220ENST00000496959 KLF16Q9BXK1 252 aaPredicted RBP11.98□□□□□ -0.49
MDM2-220ENST00000496959 NBPF20Q3BBV1 942 aa11.97□□□□□ -0.49
MDM2-220ENST00000496959 KIFC2Q96AC6 838 aa11.96□□□□□ -0.49
MDM2-220ENST00000496959 ITPKCQ96DU7 683 aa11.96□□□□□ -0.49
MDM2-220ENST00000496959 EMILIN1Q9Y6C2 1016 aa11.96□□□□□ -0.49
MDM2-220ENST00000496959 FBXO45P0C2W1 286 aa11.94□□□□□ -0.5
MDM2-220ENST00000496959 BMP1P13497 986 aa11.94□□□□□ -0.5
MDM2-220ENST00000496959 DHX9Q08211 1270 aaKnown RBP11.94□□□□□ -0.5
MDM2-220ENST00000496959 ZFAND3Q9H8U3 227 aa11.94□□□□□ -0.5
MDM2-220ENST00000496959 TRIM46Q7Z4K8 759 aa11.93□□□□□ -0.5
MDM2-220ENST00000496959 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
MDM2-220ENST00000496959 PGPEP1Q9NXJ5 209 aa11.93□□□□□ -0.5
MDM2-220ENST00000496959 ZNF330Q9Y3S2 320 aaPredicted RBP11.93□□□□□ -0.5
MDM2-220ENST00000496959 NR1H3Q13133 447 aa11.92□□□□□ -0.5
MDM2-220ENST00000496959 SCARF1Q14162 830 aa11.92□□□□□ -0.5
MDM2-220ENST00000496959 PPP1R26Q5T8A7 1209 aaPredicted RBP11.92□□□□□ -0.5
MDM2-220ENST00000496959 MRPL14Q6P1L8 145 aaKnown RBP11.92□□□□□ -0.5
MDM2-220ENST00000496959 INTS6LQ5JSJ4 861 aaKnown RBP11.91□□□□□ -0.5
MDM2-220ENST00000496959 ZNF592Q92610 1267 aa11.91□□□□□ -0.5
MDM2-220ENST00000496959 PCDHB9Q9Y5E1 797 aa11.91□□□□□ -0.5
MDM2-220ENST00000496959 MCCD1P59942 119 aaPredicted RBP11.9□□□□□ -0.5
MDM2-220ENST00000496959 TMEM132AQ24JP5 1023 aa11.9□□□□□ -0.5
MDM2-220ENST00000496959 UPP2O95045 317 aa11.89□□□□□ -0.51
MDM2-220ENST00000496959 GPR37L1O60883 481 aa11.88□□□□□ -0.51
MDM2-220ENST00000496959 SNRPBP14678 240 aaKnown RBP11.88□□□□□ -0.51
MDM2-220ENST00000496959 ZFP42Q96MM3 310 aa11.88□□□□□ -0.51
MDM2-220ENST00000496959 TBC1D2BQ9UPU7 963 aa11.88□□□□□ -0.51
MDM2-220ENST00000496959 RAB15P59190 212 aa11.87□□□□□ -0.51
MDM2-220ENST00000496959 SEPT12Q8IYM1 358 aa11.87□□□□□ -0.51
MDM2-220ENST00000496959 MEIOBQ8N635 442 aa11.87□□□□□ -0.51
MDM2-220ENST00000496959 ZNF775Q96BV0 537 aaPredicted RBP11.87□□□□□ -0.51
MDM2-220ENST00000496959 PURBQ96QR8 312 aaKnown RBP11.87□□□□□ -0.51
MDM2-220ENST00000496959 ESPNB1AK53 854 aa11.86□□□□□ -0.51
MDM2-220ENST00000496959 MCM6Q14566 821 aa11.86□□□□□ -0.51
MDM2-220ENST00000496959 TRIM52Q96A61 297 aa11.86□□□□□ -0.51
MDM2-220ENST00000496959 LINC00528Q8N1L1 170 aa11.84□□□□□ -0.51
MDM2-220ENST00000496959 TSEN34Q9BSV6 310 aaKnown RBP11.84□□□□□ -0.51
MDM2-220ENST00000496959 ERVH48-1M5A8F1 160 aa11.83□□□□□ -0.52
MDM2-220ENST00000496959 BMP2P12643 396 aa11.83□□□□□ -0.52
MDM2-220ENST00000496959 C6orf118Q5T5N4 469 aa11.83□□□□□ -0.52
MDM2-220ENST00000496959 GDPD2Q9HCC8 539 aa11.83□□□□□ -0.52
MDM2-220ENST00000496959 GIGYF1O75420 1035 aaPredicted RBP11.82□□□□□ -0.52
MDM2-220ENST00000496959 CBLBQ13191 982 aa11.82□□□□□ -0.52
MDM2-220ENST00000496959 RNF20Q5VTR2 975 aa11.82□□□□□ -0.52
MDM2-220ENST00000496959 Q6ZVU0 165 aa11.82□□□□□ -0.52
MDM2-220ENST00000496959 CCDC125Q86Z20 511 aa11.82□□□□□ -0.52
MDM2-220ENST00000496959 TMPRSS4Q9NRS4 437 aa11.82□□□□□ -0.52
MDM2-220ENST00000496959 ABL2P42684 1182 aa11.81□□□□□ -0.52
MDM2-220ENST00000496959 EIF4G2P78344 907 aaKnown RBP eCLIP11.79□□□□□ -0.52
MDM2-220ENST00000496959 FLIIQ13045 1269 aa11.79□□□□□ -0.52
MDM2-220ENST00000496959 IRF5Q13568 498 aa11.79□□□□□ -0.52
MDM2-220ENST00000496959 ZNF784Q8NCA9 323 aaPredicted RBP11.79□□□□□ -0.52
MDM2-220ENST00000496959 WASHC4Q2M389 1173 aa11.78□□□□□ -0.52
MDM2-220ENST00000496959 MAN1A2O60476 641 aa11.75□□□□□ -0.53
MDM2-220ENST00000496959 RAD21O60216 631 aa11.74□□□□□ -0.53
MDM2-220ENST00000496959 LILRA1O75019 489 aa11.74□□□□□ -0.53
MDM2-220ENST00000496959 VAC14Q08AM6 782 aa11.74□□□□□ -0.53
MDM2-220ENST00000496959 CYLDQ9NQC7 956 aa11.74□□□□□ -0.53
MDM2-220ENST00000496959 CEP126Q9P2H0 1117 aa11.74□□□□□ -0.53
MDM2-220ENST00000496959 COG6Q9Y2V7 657 aa11.74□□□□□ -0.53
MDM2-220ENST00000496959 ADH1AP07327 375 aa11.73□□□□□ -0.53
MDM2-220ENST00000496959 ADD1P35611 737 aaKnown RBP11.73□□□□□ -0.53
MDM2-220ENST00000496959 RELBQ01201 579 aa11.73□□□□□ -0.53
MDM2-220ENST00000496959 WWC1Q8IX03 1113 aa11.73□□□□□ -0.53
MDM2-220ENST00000496959 AGBL1Q96MI9 1066 aa11.73□□□□□ -0.53
MDM2-220ENST00000496959 SOS2Q07890 1332 aaPredicted RBP11.72□□□□□ -0.53
MDM2-220ENST00000496959 SPINT1O43278 529 aa11.72□□□□□ -0.53
MDM2-220ENST00000496959 TTLL8A6PVC2 850 aa11.71□□□□□ -0.53
MDM2-220ENST00000496959 TERTO14746 1132 aaKnown RBP11.71□□□□□ -0.53
MDM2-220ENST00000496959 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.53
MDM2-220ENST00000496959 CC2D2BQ6DHV5 1058 aa11.71□□□□□ -0.53
MDM2-220ENST00000496959 TREML4Q6UXN2 200 aa11.71□□□□□ -0.53
MDM2-220ENST00000496959 NXF1Q9UBU9 619 aaKnown RBP11.71□□□□□ -0.53
MDM2-220ENST00000496959 PCDHB11Q9Y5F2 797 aa11.71□□□□□ -0.53
MDM2-220ENST00000496959 SOBPA7XYQ1 873 aa11.7□□□□□ -0.54
MDM2-220ENST00000496959 ESF1Q9H501 851 aaKnown RBP11.7□□□□□ -0.54
MDM2-220ENST00000496959 WFS1O76024 890 aa11.69□□□□□ -0.54
MDM2-220ENST00000496959 SOX11P35716 441 aa11.69□□□□□ -0.54
MDM2-220ENST00000496959 ZNF395Q9H8N7 513 aaPredicted RBP11.69□□□□□ -0.54
MDM2-220ENST00000496959 PTGIRP43119 386 aa11.68□□□□□ -0.54
MDM2-220ENST00000496959 ERVK-9P63128 1117 aa11.68□□□□□ -0.54
MDM2-220ENST00000496959 SEMA3FQ13275 785 aa11.68□□□□□ -0.54
MDM2-220ENST00000496959 SLFNL1Q499Z3 407 aa11.68□□□□□ -0.54
MDM2-220ENST00000496959 SLC16A10Q8TF71 515 aa11.68□□□□□ -0.54
MDM2-220ENST00000496959 NFX1Q12986 1120 aaKnown RBP11.67□□□□□ -0.54
MDM2-220ENST00000496959 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.67□□□□□ -0.54
MDM2-220ENST00000496959 NPAS3Q8IXF0 933 aa11.67□□□□□ -0.54
MDM2-220ENST00000496959 POM121Q96HA1 1249 aa11.67□□□□□ -0.54
MDM2-220ENST00000496959 INSM2Q96T92 566 aaPredicted RBP11.67□□□□□ -0.54
MDM2-220ENST00000496959 POLMQ9NP87 494 aaPredicted RBP11.67□□□□□ -0.54
MDM2-220ENST00000496959 DNMT3LQ9UJW3 386 aa11.67□□□□□ -0.54
MDM2-220ENST00000496959 FIGNL2A6NMB9 653 aa11.66□□□□□ -0.54
MDM2-220ENST00000496959 ATP5J2-PTCD1G3V325 749 aa11.66□□□□□ -0.54
MDM2-220ENST00000496959 CTSOP43234 321 aaPredicted RBP11.64□□□□□ -0.55
MDM2-220ENST00000496959 CYP2U1Q7Z449 544 aa11.64□□□□□ -0.55
MDM2-220ENST00000496959 RNF135Q8IUD6 432 aa11.64□□□□□ -0.55
MDM2-220ENST00000496959 KDF1Q8NAX2 398 aaPredicted RBP11.64□□□□□ -0.55
MDM2-220ENST00000496959 CCDC85AQ96PX6 553 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms