RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 HMX1Q9NP08 348 aaPredicted RBP9.63□□□□□ -0.87
TRIM4-205ENST00000496896 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
TRIM4-205ENST00000496896 TRMT44Q8IYL2 757 aaKnown RBP9.62□□□□□ -0.87
TRIM4-205ENST00000496896 AGERQ15109 404 aa9.61□□□□□ -0.87
TRIM4-205ENST00000496896 PURBQ96QR8 312 aaKnown RBP9.61□□□□□ -0.87
TRIM4-205ENST00000496896 SOBPA7XYQ1 873 aa9.6□□□□□ -0.87
TRIM4-205ENST00000496896 TRIM34Q9BYJ4 488 aa9.6□□□□□ -0.87
TRIM4-205ENST00000496896 MAP4K5Q9Y4K4 846 aa9.6□□□□□ -0.87
TRIM4-205ENST00000496896 TLL2Q9Y6L7 1015 aa9.6□□□□□ -0.87
TRIM4-205ENST00000496896 APBB1O00213 710 aa9.59□□□□□ -0.87
TRIM4-205ENST00000496896 GDF11O95390 407 aa9.59□□□□□ -0.87
TRIM4-205ENST00000496896 GJD4Q96KN9 370 aaPredicted RBP9.59□□□□□ -0.87
TRIM4-205ENST00000496896 RNF225M0QZC1 329 aaPredicted RBP9.58□□□□□ -0.88
TRIM4-205ENST00000496896 ADH1CP00326 375 aa9.58□□□□□ -0.88
TRIM4-205ENST00000496896 RASSF7Q02833 373 aa9.58□□□□□ -0.88
TRIM4-205ENST00000496896 PTK2Q05397 1052 aa9.58□□□□□ -0.88
TRIM4-205ENST00000496896 NNTQ13423 1086 aa9.58□□□□□ -0.88
TRIM4-205ENST00000496896 EPS8L1Q8TE68 723 aa9.58□□□□□ -0.88
TRIM4-205ENST00000496896 ARHGAP9Q9BRR9 750 aa9.57□□□□□ -0.88
TRIM4-205ENST00000496896 NR5A1Q13285 461 aa9.56□□□□□ -0.88
TRIM4-205ENST00000496896 CDV3Q9UKY7 258 aaKnown RBP9.56□□□□□ -0.88
TRIM4-205ENST00000496896 MAGEB6P1A0A0J9YX57 407 aa9.55□□□□□ -0.88
TRIM4-205ENST00000496896 TIMP2P16035 220 aa9.55□□□□□ -0.88
TRIM4-205ENST00000496896 ERFEQ4G0M1 354 aa9.55□□□□□ -0.88
TRIM4-205ENST00000496896 MTMR14Q8NCE2 650 aa9.55□□□□□ -0.88
TRIM4-205ENST00000496896 MAN1A2O60476 641 aa9.54□□□□□ -0.88
TRIM4-205ENST00000496896 GRM5P41594 1212 aa9.54□□□□□ -0.88
TRIM4-205ENST00000496896 WDR4P57081 412 aaKnown RBP9.54□□□□□ -0.88
TRIM4-205ENST00000496896 OCSTAMPQ9BR26 566 aa9.54□□□□□ -0.88
TRIM4-205ENST00000496896 ZBTB33Q86T24 672 aa9.53□□□□□ -0.88
TRIM4-205ENST00000496896 PPFIA3O75145 1194 aa9.52□□□□□ -0.89
TRIM4-205ENST00000496896 CARD14Q9BXL6 1004 aa9.52□□□□□ -0.89
TRIM4-205ENST00000496896 NDUFB9Q9Y6M9 179 aa9.52□□□□□ -0.89
TRIM4-205ENST00000496896 ARID5BQ14865 1188 aa9.51□□□□□ -0.89
TRIM4-205ENST00000496896 TMEM132AQ24JP5 1023 aa9.51□□□□□ -0.89
TRIM4-205ENST00000496896 VASH1Q7L8A9 365 aaPredicted RBP9.51□□□□□ -0.89
TRIM4-205ENST00000496896 SLC10A4Q96EP9 437 aa9.51□□□□□ -0.89
TRIM4-205ENST00000496896 KLF16Q9BXK1 252 aaPredicted RBP9.51□□□□□ -0.89
TRIM4-205ENST00000496896 SNRKQ9NRH2 765 aa9.51□□□□□ -0.89
TRIM4-205ENST00000496896 ADAM32Q8TC27 787 aa9.5□□□□□ -0.89
TRIM4-205ENST00000496896 ADAMTS8Q9UP79 889 aa9.5□□□□□ -0.89
TRIM4-205ENST00000496896 ZBBXA8MT70 800 aa9.49□□□□□ -0.89
TRIM4-205ENST00000496896 GPR37L1O60883 481 aa9.48□□□□□ -0.89
TRIM4-205ENST00000496896 PRM3Q9NNZ6 103 aa9.48□□□□□ -0.89
TRIM4-205ENST00000496896 NR3C2P08235 984 aa9.47□□□□□ -0.89
TRIM4-205ENST00000496896 FSHRP23945 695 aa9.47□□□□□ -0.89
TRIM4-205ENST00000496896 NBPF20Q3BBV1 942 aa9.47□□□□□ -0.89
TRIM4-205ENST00000496896 C6orf118Q5T5N4 469 aa9.47□□□□□ -0.89
TRIM4-205ENST00000496896 ZNF592Q92610 1267 aa9.47□□□□□ -0.89
TRIM4-205ENST00000496896 MCCD1P59942 119 aaPredicted RBP9.46□□□□□ -0.9
TRIM4-205ENST00000496896 KCTD15Q96SI1 283 aaPredicted RBP9.46□□□□□ -0.9
TRIM4-205ENST00000496896 ZIC2O95409 532 aaPredicted RBP9.45□□□□□ -0.9
TRIM4-205ENST00000496896 IGHA1P01876 353 aa9.45□□□□□ -0.9
TRIM4-205ENST00000496896 FBXO45P0C2W1 286 aa9.45□□□□□ -0.9
TRIM4-205ENST00000496896 KRT76Q01546 638 aa9.45□□□□□ -0.9
TRIM4-205ENST00000496896 GPAT2Q6NUI2 795 aa9.45□□□□□ -0.9
TRIM4-205ENST00000496896 CCDC116Q8IYX3 515 aa9.45□□□□□ -0.9
TRIM4-205ENST00000496896 CNTNAP3BQ96NU0 1288 aa9.45□□□□□ -0.9
TRIM4-205ENST00000496896 CNTNAP3Q9BZ76 1288 aa9.45□□□□□ -0.9
TRIM4-205ENST00000496896 EMILIN1Q9Y6C2 1016 aa9.45□□□□□ -0.9
TRIM4-205ENST00000496896 DNMT3AQ9Y6K1 912 aaPredicted RBP9.45□□□□□ -0.9
TRIM4-205ENST00000496896 DHX9Q08211 1270 aaKnown RBP9.44□□□□□ -0.9
TRIM4-205ENST00000496896 NR1H3Q13133 447 aa9.44□□□□□ -0.9
TRIM4-205ENST00000496896 MCM6Q14566 821 aa9.44□□□□□ -0.9
TRIM4-205ENST00000496896 DZIP3Q86Y13 1208 aaKnown RBP9.44□□□□□ -0.9
TRIM4-205ENST00000496896 ZFAND3Q9H8U3 227 aa9.44□□□□□ -0.9
TRIM4-205ENST00000496896 UPP2O95045 317 aa9.43□□□□□ -0.9
TRIM4-205ENST00000496896 CCDC125Q86Z20 511 aa9.43□□□□□ -0.9
TRIM4-205ENST00000496896 SEPT12Q8IYM1 358 aa9.43□□□□□ -0.9
TRIM4-205ENST00000496896 ZNF330Q9Y3S2 320 aaPredicted RBP9.43□□□□□ -0.9
TRIM4-205ENST00000496896 ESPNB1AK53 854 aa9.42□□□□□ -0.9
TRIM4-205ENST00000496896 BMP2P12643 396 aa9.42□□□□□ -0.9
TRIM4-205ENST00000496896 ITPKCQ96DU7 683 aa9.42□□□□□ -0.9
TRIM4-205ENST00000496896 INTS6LQ5JSJ4 861 aaKnown RBP9.41□□□□□ -0.9
TRIM4-205ENST00000496896 GPR161Q8N6U8 529 aaKnown RBP9.41□□□□□ -0.9
TRIM4-205ENST00000496896 TRIM52Q96A61 297 aa9.41□□□□□ -0.9
TRIM4-205ENST00000496896 PGPEP1Q9NXJ5 209 aa9.41□□□□□ -0.9
TRIM4-205ENST00000496896 PPP1R26Q5T8A7 1209 aaPredicted RBP9.4□□□□□ -0.9
TRIM4-205ENST00000496896 LINC00528Q8N1L1 170 aa9.4□□□□□ -0.9
TRIM4-205ENST00000496896 SVOPQ8N4V2 548 aa9.4□□□□□ -0.9
TRIM4-205ENST00000496896 TBC1D2BQ9UPU7 963 aa9.4□□□□□ -0.9
TRIM4-205ENST00000496896 IRS1P35568 1242 aa9.39□□□□□ -0.91
TRIM4-205ENST00000496896 FOXK2Q01167 660 aa9.39□□□□□ -0.91
TRIM4-205ENST00000496896 FLIIQ13045 1269 aa9.39□□□□□ -0.91
TRIM4-205ENST00000496896 ZNF385CQ66K41 422 aaPredicted RBP9.39□□□□□ -0.91
TRIM4-205ENST00000496896 DNMT3LQ9UJW3 386 aa9.39□□□□□ -0.91
TRIM4-205ENST00000496896 SOS2Q07890 1332 aaPredicted RBP9.38□□□□□ -0.91
TRIM4-205ENST00000496896 MEIOBQ8N635 442 aa9.38□□□□□ -0.91
TRIM4-205ENST00000496896 COL25A1Q9BXS0 654 aaPredicted RBP9.38□□□□□ -0.91
TRIM4-205ENST00000496896 XP32Q5T750 250 aa9.37□□□□□ -0.91
TRIM4-205ENST00000496896 Q6ZVU0 165 aa9.37□□□□□ -0.91
TRIM4-205ENST00000496896 PCDHB9Q9Y5E1 797 aa9.37□□□□□ -0.91
TRIM4-205ENST00000496896 IRF5Q13568 498 aa9.36□□□□□ -0.91
TRIM4-205ENST00000496896 RNF20Q5VTR2 975 aa9.36□□□□□ -0.91
TRIM4-205ENST00000496896 KANK3Q6NY19 840 aa9.36□□□□□ -0.91
TRIM4-205ENST00000496896 WASHC4Q2M389 1173 aa9.35□□□□□ -0.91
TRIM4-205ENST00000496896 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.35□□□□□ -0.911e-18■■■■□ 22.5
TRIM4-205ENST00000496896 GDPD2Q9HCC8 539 aa9.35□□□□□ -0.91
TRIM4-205ENST00000496896 TSEN34Q9BSV6 310 aaKnown RBP9.34□□□□□ -0.91
TRIM4-205ENST00000496896 ERVH48-1M5A8F1 160 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 925.5 ms