RNA–Protein interactions for RNA: ENST00000496854.1

ITGAV-208, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 611 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-208ENST00000496854 METP08581 1390 aa12.11□□□□□ -0.47
ITGAV-208ENST00000496854 PSEN2P49810 448 aa12.11□□□□□ -0.47
ITGAV-208ENST00000496854 HDGFP51858 240 aaKnown RBP12.11□□□□□ -0.47
ITGAV-208ENST00000496854 LSM11P83369 360 aaKnown RBP eCLIP12.11□□□□□ -0.47
ITGAV-208ENST00000496854 C14orf37Q86TY3 774 aa12.11□□□□□ -0.47
ITGAV-208ENST00000496854 DDX12PQ92771 950 aa12.11□□□□□ -0.47
ITGAV-208ENST00000496854 PPARGC1BQ86YN6 1023 aaKnown RBP12.1□□□□□ -0.47
ITGAV-208ENST00000496854 KCNV2Q8TDN2 545 aa12.1□□□□□ -0.47
ITGAV-208ENST00000496854 KCNK17Q96T54 332 aa12.1□□□□□ -0.47
ITGAV-208ENST00000496854 PCDHGA10Q9Y5H3 936 aa12.1□□□□□ -0.47
ITGAV-208ENST00000496854 ADGRL3Q9HAR2 1447 aa12.1□□□□□ -0.47
ITGAV-208ENST00000496854 RRBP1Q9P2E9 1410 aaKnown RBP12.1□□□□□ -0.47
ITGAV-208ENST00000496854 SPATA31A6Q5VVP1 1343 aa12.1□□□□□ -0.47
ITGAV-208ENST00000496854 PHF14O94880 888 aa12.09□□□□□ -0.47
ITGAV-208ENST00000496854 BRINP3Q76B58 766 aa12.09□□□□□ -0.47
ITGAV-208ENST00000496854 AMOTL2Q9Y2J4 779 aa12.09□□□□□ -0.47
ITGAV-208ENST00000496854 NAIPQ13075 1403 aa12.09□□□□□ -0.47
ITGAV-208ENST00000496854 LAMC1P11047 1609 aa12.08□□□□□ -0.48
ITGAV-208ENST00000496854 PPLO60437 1756 aa12.08□□□□□ -0.48
ITGAV-208ENST00000496854 C19orf44Q9H6X5 657 aa12.08□□□□□ -0.48
ITGAV-208ENST00000496854 BCL2L12Q9HB09 334 aa12.08□□□□□ -0.48
ITGAV-208ENST00000496854 ATF3P18847 181 aa12.07□□□□□ -0.48
ITGAV-208ENST00000496854 PTGER2P43116 358 aa12.07□□□□□ -0.48
ITGAV-208ENST00000496854 PTCH1Q13635 1447 aa12.07□□□□□ -0.48
ITGAV-208ENST00000496854 TYW1BQ6NUM6 668 aa12.07□□□□□ -0.48
ITGAV-208ENST00000496854 ARHGEF1Q92888 912 aaKnown RBP12.07□□□□□ -0.48
ITGAV-208ENST00000496854 ADAM33Q9BZ11 813 aa12.07□□□□□ -0.48
ITGAV-208ENST00000496854 SETD5Q9C0A6 1442 aa12.07□□□□□ -0.48
ITGAV-208ENST00000496854 PTPREP23469 700 aa12.06□□□□□ -0.48
ITGAV-208ENST00000496854 PRAG1Q86YV5 1406 aa12.05□□□□□ -0.48
ITGAV-208ENST00000496854 DMRTA1Q5VZB9 504 aa12.05□□□□□ -0.48
ITGAV-208ENST00000496854 FBXW7Q969H0 707 aa12.05□□□□□ -0.48
ITGAV-208ENST00000496854 EPAS1Q99814 870 aa12.05□□□□□ -0.48
ITGAV-208ENST00000496854 IFT172Q9UG01 1749 aa12.04□□□□□ -0.48
ITGAV-208ENST00000496854 ZNF326Q5BKZ1 582 aaKnown RBP12.04□□□□□ -0.48
ITGAV-208ENST00000496854 MEX3CQ5U5Q3 659 aaKnown RBP12.04□□□□□ -0.48
ITGAV-208ENST00000496854 KDM2AQ9Y2K7 1162 aa12.04□□□□□ -0.48
ITGAV-208ENST00000496854 PNPLA6Q8IY17 1366 aa12.04□□□□□ -0.48
ITGAV-208ENST00000496854 C1orf167Q5SNV9 1468 aa12.03□□□□□ -0.48
ITGAV-208ENST00000496854 GRXCR2A6NFK2 248 aa12.03□□□□□ -0.48
ITGAV-208ENST00000496854 NBR1Q14596 966 aa12.03□□□□□ -0.48
ITGAV-208ENST00000496854 HFM1A2PYH4 1435 aa12.03□□□□□ -0.48
ITGAV-208ENST00000496854 RGS12O14924 1447 aa12.03□□□□□ -0.48
ITGAV-208ENST00000496854 CDK12Q9NYV4 1490 aaPredicted RBP12.02□□□□□ -0.48
ITGAV-208ENST00000496854 CDC42BPGQ6DT37 1551 aa12.02□□□□□ -0.49
ITGAV-208ENST00000496854 DDX17Q92841 729 aaKnown RBP12.02□□□□□ -0.49
ITGAV-208ENST00000496854 COL22A1Q8NFW1 1626 aaPredicted RBP12.01□□□□□ -0.49
ITGAV-208ENST00000496854 MMRN1Q13201 1228 aa12.01□□□□□ -0.49
ITGAV-208ENST00000496854 VSIG10Q8N0Z9 540 aa12.01□□□□□ -0.49
ITGAV-208ENST00000496854 TRIM52Q96A61 297 aa12.01□□□□□ -0.49
ITGAV-208ENST00000496854 ROBO2Q9HCK4 1378 aa12.01□□□□□ -0.49
ITGAV-208ENST00000496854 KNDC1Q76NI1 1749 aa12□□□□□ -0.49
ITGAV-208ENST00000496854 NUTM2BA6NNL0 878 aaPredicted RBP12□□□□□ -0.49
ITGAV-208ENST00000496854 NUTM2EB1AL46 878 aaPredicted RBP12□□□□□ -0.49
ITGAV-208ENST00000496854 ZNF772Q68DY9 489 aaPredicted RBP12□□□□□ -0.49
ITGAV-208ENST00000496854 ADGRD1Q6QNK2 874 aa12□□□□□ -0.49
ITGAV-208ENST00000496854 NUTM2AQ8IVF1 878 aaPredicted RBP12□□□□□ -0.49
ITGAV-208ENST00000496854 AFF2P51816 1311 aa12□□□□□ -0.49
ITGAV-208ENST00000496854 MARF1Q9Y4F3 1742 aaKnown RBP11.97□□□□□ -0.49
ITGAV-208ENST00000496854 TK2O00142 265 aa11.97□□□□□ -0.49
ITGAV-208ENST00000496854 MAP3K7O43318 606 aa11.97□□□□□ -0.49
ITGAV-208ENST00000496854 C6orf132Q5T0Z8 1188 aa11.96□□□□□ -0.49
ITGAV-208ENST00000496854 MYOM2P54296 1465 aa11.95□□□□□ -0.5
ITGAV-208ENST00000496854 PXDNQ92626 1479 aa11.95□□□□□ -0.5
ITGAV-208ENST00000496854 RXRBP28702 533 aa11.95□□□□□ -0.5
ITGAV-208ENST00000496854 EN1Q05925 392 aaPredicted RBP11.95□□□□□ -0.5
ITGAV-208ENST00000496854 C8orf37Q96NL8 207 aa11.95□□□□□ -0.5
ITGAV-208ENST00000496854 FMN2Q9NZ56 1722 aa11.94□□□□□ -0.5
ITGAV-208ENST00000496854 PPP1R3GB7ZBB8 358 aa11.94□□□□□ -0.5
ITGAV-208ENST00000496854 LRRC59Q96AG4 307 aaKnown RBP11.94□□□□□ -0.5
ITGAV-208ENST00000496854 STAC3Q96MF2 364 aa11.94□□□□□ -0.5
ITGAV-208ENST00000496854 VPS9D1Q9Y2B5 631 aa11.94□□□□□ -0.5
ITGAV-208ENST00000496854 TECPR2O15040 1411 aa11.94□□□□□ -0.5
ITGAV-208ENST00000496854 SOS2Q07890 1332 aaPredicted RBP11.93□□□□□ -0.5
ITGAV-208ENST00000496854 COL9A1P20849 921 aa11.93□□□□□ -0.5
ITGAV-208ENST00000496854 ORAI2Q96SN7 254 aa11.93□□□□□ -0.5
ITGAV-208ENST00000496854 ZBED2Q9BTP6 218 aa11.93□□□□□ -0.5
ITGAV-208ENST00000496854 SPATA31E1Q6ZUB1 1445 aa11.93□□□□□ -0.5
ITGAV-208ENST00000496854 EP400Q96L91 3159 aa11.92□□□□□ -0.5
ITGAV-208ENST00000496854 KIF1AQ12756 1690 aa11.92□□□□□ -0.5
ITGAV-208ENST00000496854 MLLT3P42568 568 aaPredicted RBP11.92□□□□□ -0.5
ITGAV-208ENST00000496854 TSR1Q2NL82 804 aaKnown RBP11.92□□□□□ -0.5
ITGAV-208ENST00000496854 ABCA3Q99758 1704 aa11.91□□□□□ -0.5
ITGAV-208ENST00000496854 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.91□□□□□ -0.5
ITGAV-208ENST00000496854 OSBPP22059 807 aa11.91□□□□□ -0.5
ITGAV-208ENST00000496854 RNF166Q96A37 237 aaPredicted RBP11.91□□□□□ -0.5
ITGAV-208ENST00000496854 SLC4A5Q9BY07 1137 aa11.91□□□□□ -0.5
ITGAV-208ENST00000496854 CCDC144AA2RUR9 1427 aa11.91□□□□□ -0.5
ITGAV-208ENST00000496854 PIK3C2GO75747 1445 aa11.91□□□□□ -0.5
ITGAV-208ENST00000496854 ADGRF5Q8IZF2 1346 aa11.9□□□□□ -0.5
ITGAV-208ENST00000496854 ATRNO75882 1429 aa11.9□□□□□ -0.5
ITGAV-208ENST00000496854 ADAMTS2O95450 1211 aa11.9□□□□□ -0.5
ITGAV-208ENST00000496854 PRIM1P49642 420 aaKnown RBP11.9□□□□□ -0.5
ITGAV-208ENST00000496854 RPGRIP1LQ68CZ1 1315 aa11.89□□□□□ -0.51
ITGAV-208ENST00000496854 SEMA3EO15041 775 aa11.89□□□□□ -0.51
ITGAV-208ENST00000496854 HRO43593 1189 aa11.89□□□□□ -0.51
ITGAV-208ENST00000496854 PLEKHH1Q9ULM0 1364 aa11.89□□□□□ -0.51
ITGAV-208ENST00000496854 USP32Q8NFA0 1604 aa11.89□□□□□ -0.51
ITGAV-208ENST00000496854 RGPD8O14715 1765 aaPredicted RBP11.88□□□□□ -0.51
ITGAV-208ENST00000496854 SLC24A1O60721 1099 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms