RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 LRRFIP2Q9Y608 721 aaKnown RBP10.43□□□□□ -0.74
MACF1-224ENST00000496804 SPAG9O60271 1321 aaKnown RBP10.43□□□□□ -0.74
MACF1-224ENST00000496804 DIAPH1O60610 1272 aaKnown RBP10.43□□□□□ -0.74
MACF1-224ENST00000496804 TTLL5Q6EMB2 1281 aa10.43□□□□□ -0.74
MACF1-224ENST00000496804 PEG3Q9GZU2 1588 aa10.43□□□□□ -0.74
MACF1-224ENST00000496804 CLGNO14967 610 aa10.43□□□□□ -0.74
MACF1-224ENST00000496804 SFPQP23246 707 aaKnown RBP eCLIP10.43□□□□□ -0.74
MACF1-224ENST00000496804 UBE2HP62256 183 aa10.43□□□□□ -0.74
MACF1-224ENST00000496804 SPATA32Q96LK8 384 aa10.43□□□□□ -0.74
MACF1-224ENST00000496804 TRAK1Q9UPV9 953 aa10.43□□□□□ -0.74
MACF1-224ENST00000496804 LARP1BQ659C4 914 aaKnown RBP10.42□□□□□ -0.74
MACF1-224ENST00000496804 CEP57L1Q8IYX8 460 aa10.42□□□□□ -0.74
MACF1-224ENST00000496804 MX1P20591 662 aa10.42□□□□□ -0.74
MACF1-224ENST00000496804 SNW1Q13573 536 aaKnown RBP10.42□□□□□ -0.74
MACF1-224ENST00000496804 GIMAP6Q6P9H5 292 aa10.42□□□□□ -0.74
MACF1-224ENST00000496804 IPO7O95373 1038 aaKnown RBP10.42□□□□□ -0.74
MACF1-224ENST00000496804 STAC3Q96MF2 364 aa10.42□□□□□ -0.74
MACF1-224ENST00000496804 RSPH14Q9UHP6 348 aa10.42□□□□□ -0.74
MACF1-224ENST00000496804 KDM4AO75164 1064 aa10.42□□□□□ -0.74
MACF1-224ENST00000496804 CERS3Q8IU89 383 aa10.42□□□□□ -0.74
MACF1-224ENST00000496804 PARD3Q8TEW0 1356 aa10.42□□□□□ -0.74
MACF1-224ENST00000496804 SCAPERQ9BY12 1400 aa10.41□□□□□ -0.74
MACF1-224ENST00000496804 A0A1B0GUL7 405 aa10.41□□□□□ -0.74
MACF1-224ENST00000496804 KRBA2Q6ZNG9 492 aa10.41□□□□□ -0.74
MACF1-224ENST00000496804 GTF3C6Q969F1 213 aa10.41□□□□□ -0.74
MACF1-224ENST00000496804 UPF3BQ9BZI7 483 aaKnown RBP10.41□□□□□ -0.74
MACF1-224ENST00000496804 PES1O00541 588 aaKnown RBP10.41□□□□□ -0.74
MACF1-224ENST00000496804 OLFM4Q6UX06 510 aa10.41□□□□□ -0.74
MACF1-224ENST00000496804 CKAP2LQ8IYA6 745 aa10.41□□□□□ -0.74
MACF1-224ENST00000496804 TMX1Q9H3N1 280 aa10.41□□□□□ -0.74
MACF1-224ENST00000496804 GPRASP1Q5JY77 1395 aa10.41□□□□□ -0.74
MACF1-224ENST00000496804 CT47A1Q5JQC4 288 aaPredicted RBP10.41□□□□□ -0.74
MACF1-224ENST00000496804 CCDC91Q7Z6B0 441 aa10.41□□□□□ -0.74
MACF1-224ENST00000496804 SSH1Q8WYL5 1049 aa10.41□□□□□ -0.74
MACF1-224ENST00000496804 SLC26A8Q96RN1 970 aa10.41□□□□□ -0.74
MACF1-224ENST00000496804 CENPHQ9H3R5 247 aa10.41□□□□□ -0.74
MACF1-224ENST00000496804 STK26Q9P289 416 aa10.41□□□□□ -0.74
MACF1-224ENST00000496804 TRIM27P14373 513 aa10.4□□□□□ -0.74
MACF1-224ENST00000496804 PTGS1P23219 599 aa10.4□□□□□ -0.74
MACF1-224ENST00000496804 TDO2P48775 406 aa10.4□□□□□ -0.74
MACF1-224ENST00000496804 FOSBP53539 338 aa10.4□□□□□ -0.74
MACF1-224ENST00000496804 NUCB1Q02818 461 aa10.4□□□□□ -0.74
MACF1-224ENST00000496804 RSPH4AQ5TD94 716 aa10.4□□□□□ -0.74
MACF1-224ENST00000496804 DDX11Q96FC9 970 aa10.4□□□□□ -0.74
MACF1-224ENST00000496804 GBP3Q9H0R5 595 aa10.4□□□□□ -0.74
MACF1-224ENST00000496804 SERPINC1P01008 464 aa10.4□□□□□ -0.74
MACF1-224ENST00000496804 USP48Q86UV5 1035 aa10.4□□□□□ -0.74
MACF1-224ENST00000496804 CEBPZQ03701 1054 aaKnown RBP10.4□□□□□ -0.74
MACF1-224ENST00000496804 LMBRD1Q9NUN5 540 aa10.4□□□□□ -0.74
MACF1-224ENST00000496804 PSMA5P28066 241 aa10.4□□□□□ -0.75
MACF1-224ENST00000496804 FAM200AQ8TCP9 573 aa10.4□□□□□ -0.75
MACF1-224ENST00000496804 HDAC5Q9UQL6 1122 aa10.4□□□□□ -0.75
MACF1-224ENST00000496804 SHTN1A0MZ66 631 aa10.39□□□□□ -0.75
MACF1-224ENST00000496804 GSDMDP57764 484 aa10.39□□□□□ -0.75
MACF1-224ENST00000496804 HOOK1Q9UJC3 728 aaKnown RBP10.39□□□□□ -0.75
MACF1-224ENST00000496804 POLA1P09884 1462 aaPredicted RBP10.39□□□□□ -0.75
MACF1-224ENST00000496804 JAKMIP3Q5VZ66 844 aa10.39□□□□□ -0.75
MACF1-224ENST00000496804 TMX3Q96JJ7 454 aa10.39□□□□□ -0.75
MACF1-224ENST00000496804 ZNF165P49910 485 aa10.39□□□□□ -0.75
MACF1-224ENST00000496804 CAGE1Q8TC20 777 aa10.39□□□□□ -0.75
MACF1-224ENST00000496804 FGD5Q6ZNL6 1462 aa10.39□□□□□ -0.75
MACF1-224ENST00000496804 ZSCAN12O43309 604 aa10.39□□□□□ -0.75
MACF1-224ENST00000496804 SKILP12757 684 aa10.39□□□□□ -0.75
MACF1-224ENST00000496804 LRRCC1Q9C099 1032 aa10.39□□□□□ -0.75
MACF1-224ENST00000496804 CYP46A1Q9Y6A2 500 aa10.39□□□□□ -0.75
MACF1-224ENST00000496804 TDRD9Q8NDG6 1382 aaKnown RBP10.39□□□□□ -0.75
MACF1-224ENST00000496804 NCAPD3P42695 1498 aa10.38□□□□□ -0.75
MACF1-224ENST00000496804 EHBP1L1Q8N3D4 1523 aa10.38□□□□□ -0.75
MACF1-224ENST00000496804 DCTN1Q14203 1278 aa10.38□□□□□ -0.75
MACF1-224ENST00000496804 ERO1AQ96HE7 468 aa10.38□□□□□ -0.75
MACF1-224ENST00000496804 ARFGAP3Q9NP61 516 aa10.38□□□□□ -0.75
MACF1-224ENST00000496804 PRDM4Q9UKN5 801 aa10.38□□□□□ -0.75
MACF1-224ENST00000496804 CAPN2P17655 700 aa10.38□□□□□ -0.75
MACF1-224ENST00000496804 CNTROBQ8N137 903 aa10.38□□□□□ -0.75
MACF1-224ENST00000496804 ZGPATQ8N5A5 531 aaKnown RBP10.38□□□□□ -0.75
MACF1-224ENST00000496804 ZSCAN31Q96LW9 406 aaPredicted RBP10.38□□□□□ -0.75
MACF1-224ENST00000496804 CBFA2T2O43439 604 aa10.38□□□□□ -0.75
MACF1-224ENST00000496804 DRC1Q96MC2 740 aa10.38□□□□□ -0.75
MACF1-224ENST00000496804 MYCBPQ99417 103 aaPredicted RBP10.38□□□□□ -0.75
MACF1-224ENST00000496804 ATAD2BQ9ULI0 1458 aa10.37□□□□□ -0.75
MACF1-224ENST00000496804 IBSPP21815 317 aaPredicted RBP10.37□□□□□ -0.75
MACF1-224ENST00000496804 SYNE3Q6ZMZ3 975 aa10.37□□□□□ -0.75
MACF1-224ENST00000496804 FERMT3Q86UX7 667 aa10.37□□□□□ -0.75
MACF1-224ENST00000496804 ANKRD20A12PQ8NF67 263 aa10.37□□□□□ -0.75
MACF1-224ENST00000496804 CASQ1P31415 396 aa10.37□□□□□ -0.75
MACF1-224ENST00000496804 ARHGAP29Q52LW3 1261 aa10.37□□□□□ -0.75
MACF1-224ENST00000496804 SCAND2PQ9GZW5 306 aaPredicted RBP10.37□□□□□ -0.75
MACF1-224ENST00000496804 DDX19AQ9NUU7 478 aaKnown RBP10.37□□□□□ -0.75
MACF1-224ENST00000496804 PPP6R1Q9UPN7 881 aa10.37□□□□□ -0.75
MACF1-224ENST00000496804 TOP2BQ02880 1626 aa10.37□□□□□ -0.75
MACF1-224ENST00000496804 FAM193AP78312 1265 aa10.37□□□□□ -0.75
MACF1-224ENST00000496804 TMEM63CQ9P1W3 806 aa10.37□□□□□ -0.75
MACF1-224ENST00000496804 SOX12O15370 315 aa10.37□□□□□ -0.75
MACF1-224ENST00000496804 RLBP1P12271 317 aa10.37□□□□□ -0.75
MACF1-224ENST00000496804 ZNF396Q96N95 335 aaPredicted RBP10.37□□□□□ -0.75
MACF1-224ENST00000496804 IBTKQ9P2D0 1353 aaPredicted RBP10.36□□□□□ -0.75
MACF1-224ENST00000496804 STX6O43752 255 aa10.36□□□□□ -0.75
MACF1-224ENST00000496804 TWISTNBQ3B726 338 aaPredicted RBP10.36□□□□□ -0.75
MACF1-224ENST00000496804 ZNF428Q96B54 188 aa10.36□□□□□ -0.75
MACF1-224ENST00000496804 AQRO60306 1485 aaKnown RBP eCLIP10.36□□□□□ -0.752e-6■■■■□ 25.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms