RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 ZBTB7CA1YPR0 619 aa22.47■■□□□ 1.19
DNMT3A-215ENST00000496570 FAM98CQ17RN3 349 aaKnown RBP22.47■■□□□ 1.19
DNMT3A-215ENST00000496570 ABCC6O95255 1503 aa22.47■■□□□ 1.19
DNMT3A-215ENST00000496570 LTN1O94822 1766 aa22.45■■□□□ 1.19
DNMT3A-215ENST00000496570 FYB1O15117 783 aa22.45■■□□□ 1.18
DNMT3A-215ENST00000496570 EVA1CP58658 441 aa22.44■■□□□ 1.18
DNMT3A-215ENST00000496570 KIF20BQ96Q89 1820 aa22.43■■□□□ 1.18
DNMT3A-215ENST00000496570 CRB1P82279 1406 aa22.42■■□□□ 1.18
DNMT3A-215ENST00000496570 NSD3Q9BZ95 1437 aa22.42■■□□□ 1.18
DNMT3A-215ENST00000496570 FBLN1P23142 703 aa22.4■■□□□ 1.18
DNMT3A-215ENST00000496570 BARGINQ6ZT62 677 aa22.4■■□□□ 1.18
DNMT3A-215ENST00000496570 COG3Q96JB2 828 aa22.4■■□□□ 1.18
DNMT3A-215ENST00000496570 GGNBP2Q9H3C7 697 aa22.4■■□□□ 1.18
DNMT3A-215ENST00000496570 USP35Q9P2H5 1018 aa22.4■■□□□ 1.18
DNMT3A-215ENST00000496570 WDR17Q8IZU2 1322 aa22.39■■□□□ 1.18
DNMT3A-215ENST00000496570 TCP11L2Q8N4U5 519 aa22.39■■□□□ 1.17
DNMT3A-215ENST00000496570 KRT27Q7Z3Y8 459 aa22.38■■□□□ 1.17
DNMT3A-215ENST00000496570 POLR3GLQ9BT43 218 aa22.38■■□□□ 1.17
DNMT3A-215ENST00000496570 WNK3Q9BYP7 1800 aa22.36■■□□□ 1.17
DNMT3A-215ENST00000496570 THRAP3Q9Y2W1 955 aaKnown RBP22.36■■□□□ 1.17
DNMT3A-215ENST00000496570 KIF7Q2M1P5 1343 aa22.35■■□□□ 1.17
DNMT3A-215ENST00000496570 MAP3K19Q56UN5 1328 aa22.35■■□□□ 1.17
DNMT3A-215ENST00000496570 PARP4Q9UKK3 1724 aaKnown RBP22.35■■□□□ 1.17
DNMT3A-215ENST00000496570 A0A0G2JS52 829 aa22.35■■□□□ 1.17
DNMT3A-215ENST00000496570 MYT1Q01538 1121 aa22.35■■□□□ 1.17
DNMT3A-215ENST00000496570 ERBB3P21860 1342 aa22.34■■□□□ 1.17
DNMT3A-215ENST00000496570 TOM1L2Q6ZVM7 507 aa22.34■■□□□ 1.17
DNMT3A-215ENST00000496570 IP6K1Q92551 441 aa22.33■■□□□ 1.17
DNMT3A-215ENST00000496570 PANK3Q9H999 370 aa22.33■■□□□ 1.17
DNMT3A-215ENST00000496570 BLMP54132 1417 aaPredicted RBP22.32■■□□□ 1.16
DNMT3A-215ENST00000496570 FAM182BQ5T319 152 aa22.32■■□□□ 1.16
DNMT3A-215ENST00000496570 CARD10Q9BWT7 1032 aa22.32■■□□□ 1.16
DNMT3A-215ENST00000496570 DISP2A7MBM2 1401 aa22.31■■□□□ 1.16
DNMT3A-215ENST00000496570 LRRC37A3O60309 1634 aa22.31■■□□□ 1.16
DNMT3A-215ENST00000496570 PEAK1Q9H792 1746 aa22.31■■□□□ 1.16
DNMT3A-215ENST00000496570 RRS1Q15050 365 aaKnown RBP22.3■■□□□ 1.16
DNMT3A-215ENST00000496570 CGNL1Q0VF96 1302 aa22.3■■□□□ 1.16
DNMT3A-215ENST00000496570 ANKRD26Q9UPS8 1709 aa22.29■■□□□ 1.16
DNMT3A-215ENST00000496570 CSB-PGBD3P0DP91 1061 aa22.29■■□□□ 1.16
DNMT3A-215ENST00000496570 HOXC9P31274 260 aa22.29■■□□□ 1.16
DNMT3A-215ENST00000496570 ANKRD24Q8TF21 1146 aa22.29■■□□□ 1.16
DNMT3A-215ENST00000496570 RTL1A6NKG5 1358 aa22.27■■□□□ 1.16
DNMT3A-215ENST00000496570 CCDC7Q96M83 1385 aa22.26■■□□□ 1.15
DNMT3A-215ENST00000496570 CCDC125Q86Z20 511 aa22.26■■□□□ 1.15
DNMT3A-215ENST00000496570 FAM208AQ9UK61 1670 aaKnown RBP22.26■■□□□ 1.15
DNMT3A-215ENST00000496570 WASHC2AQ641Q2 1341 aa22.25■■□□□ 1.15
DNMT3A-215ENST00000496570 AMPHP49418 695 aa22.24■■□□□ 1.15
DNMT3A-215ENST00000496570 RGPD2P0DJD1 1756 aa22.24■■□□□ 1.15
DNMT3A-215ENST00000496570 NLRP2Q9NX02 1062 aa22.23■■□□□ 1.15
DNMT3A-215ENST00000496570 EMILIN1Q9Y6C2 1016 aa22.23■■□□□ 1.15
DNMT3A-215ENST00000496570 TNS1Q9HBL0 1735 aaKnown RBP22.22■■□□□ 1.15
DNMT3A-215ENST00000496570 KIF24Q5T7B8 1368 aa22.22■■□□□ 1.15
DNMT3A-215ENST00000496570 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
DNMT3A-215ENST00000496570 LTV1Q96GA3 475 aaPredicted RBP22.21■■□□□ 1.15
DNMT3A-215ENST00000496570 CDCA7Q9BWT1 371 aaPredicted RBP22.21■■□□□ 1.15
DNMT3A-215ENST00000496570 RGPD1P0DJD0 1748 aa22.2■■□□□ 1.14
DNMT3A-215ENST00000496570 MAP2P11137 1827 aaKnown RBP22.2■■□□□ 1.14
DNMT3A-215ENST00000496570 DDB1Q16531 1140 aa22.2■■□□□ 1.14
DNMT3A-215ENST00000496570 HSP90AB2PQ58FF8 381 aa22.2■■□□□ 1.14
DNMT3A-215ENST00000496570 INSRP06213 1382 aa22.2■■□□□ 1.14
DNMT3A-215ENST00000496570 FLT4P35916 1363 aa22.2■■□□□ 1.14
DNMT3A-215ENST00000496570 PER1O15534 1290 aaPredicted RBP22.19■■□□□ 1.14
DNMT3A-215ENST00000496570 FAM196AQ6ZSG2 479 aa22.19■■□□□ 1.14
DNMT3A-215ENST00000496570 NSD2O96028 1365 aa22.19■■□□□ 1.14
DNMT3A-215ENST00000496570 AMER1Q5JTC6 1135 aaPredicted RBP22.18■■□□□ 1.14
DNMT3A-215ENST00000496570 DEFB132Q7Z7B7 95 aa22.18■■□□□ 1.14
DNMT3A-215ENST00000496570 POLKQ9UBT6 870 aa22.18■■□□□ 1.14
DNMT3A-215ENST00000496570 TNS2Q63HR2 1409 aa22.17■■□□□ 1.14
DNMT3A-215ENST00000496570 MARCH10Q8NA82 808 aaPredicted RBP22.17■■□□□ 1.14
DNMT3A-215ENST00000496570 NBPF6Q5VWK0 638 aa22.16■■□□□ 1.14
DNMT3A-215ENST00000496570 NBPF4Q96M43 638 aa22.16■■□□□ 1.14
DNMT3A-215ENST00000496570 OVOS2A0A0G2JMS6 1433 aa22.15■■□□□ 1.14
DNMT3A-215ENST00000496570 IL2RBP14784 551 aa22.15■■□□□ 1.14
DNMT3A-215ENST00000496570 KNSTRNQ9Y448 316 aa22.15■■□□□ 1.14
DNMT3A-215ENST00000496570 SBF2Q86WG5 1849 aa22.15■■□□□ 1.14
DNMT3A-215ENST00000496570 BCL9O00512 1426 aa22.14■■□□□ 1.14
DNMT3A-215ENST00000496570 TRIM37O94972 964 aa22.14■■□□□ 1.13
DNMT3A-215ENST00000496570 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.13
DNMT3A-215ENST00000496570 SMG6Q86US8 1419 aaKnown RBP22.14■■□□□ 1.13
DNMT3A-215ENST00000496570 EXOC5O00471 708 aa22.13■■□□□ 1.13
DNMT3A-215ENST00000496570 MEGF6O75095 1541 aa22.12■■□□□ 1.13
DNMT3A-215ENST00000496570 SHANK3Q9BYB0 1731 aa22.11■■□□□ 1.13
DNMT3A-215ENST00000496570 PPM1GO15355 546 aaPredicted RBP22.11■■□□□ 1.13
DNMT3A-215ENST00000496570 SF3B2Q13435 895 aaKnown RBP22.11■■□□□ 1.13
DNMT3A-215ENST00000496570 NCAPD2Q15021 1401 aa22.11■■□□□ 1.13
DNMT3A-215ENST00000496570 USHBP1Q8N6Y0 703 aa22.1■■□□□ 1.13
DNMT3A-215ENST00000496570 PTF1AQ7RTS3 328 aa22.09■■□□□ 1.13
DNMT3A-215ENST00000496570 MORC1Q86VD1 984 aa22.09■■□□□ 1.13
DNMT3A-215ENST00000496570 BAG6P46379 1132 aa22.07■■□□□ 1.12
DNMT3A-215ENST00000496570 EN1Q05925 392 aaPredicted RBP22.07■■□□□ 1.12
DNMT3A-215ENST00000496570 CAMKK2Q96RR4 588 aa22.06■■□□□ 1.12
DNMT3A-215ENST00000496570 NPC1L1Q9UHC9 1359 aa22.06■■□□□ 1.12
DNMT3A-215ENST00000496570 EIF4A2Q14240 407 aaKnown RBP22.05■■□□□ 1.12
DNMT3A-215ENST00000496570 APBA3O96018 575 aa22.04■■□□□ 1.12
DNMT3A-215ENST00000496570 EYA1Q99502 592 aa22.04■■□□□ 1.12
DNMT3A-215ENST00000496570 RREB1Q92766 1687 aa22.04■■□□□ 1.12
DNMT3A-215ENST00000496570 EZH2Q15910 746 aaKnown RBP22.03■■□□□ 1.12
DNMT3A-215ENST00000496570 CC2D1BQ5T0F9 858 aaKnown RBP22.03■■□□□ 1.12
DNMT3A-215ENST00000496570 NHSQ6T4R5 1651 aa22.03■■□□□ 1.12
DNMT3A-215ENST00000496570 BCL11BQ9C0K0 894 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms