RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 WNK3Q9BYP7 1800 aa18.33■□□□□ 0.52
FN1-226ENST00000496542 LRRC37A3O60309 1634 aa18.32■□□□□ 0.52
FN1-226ENST00000496542 EZH2Q15910 746 aaKnown RBP18.32■□□□□ 0.52
FN1-226ENST00000496542 WDR17Q8IZU2 1322 aa18.31■□□□□ 0.52
FN1-226ENST00000496542 APBA3O96018 575 aa18.31■□□□□ 0.52
FN1-226ENST00000496542 CSB-PGBD3P0DP91 1061 aa18.31■□□□□ 0.52
FN1-226ENST00000496542 HDGFL2Q7Z4V5 671 aaPredicted RBP18.31■□□□□ 0.52
FN1-226ENST00000496542 NME9Q86XW9 330 aa18.3■□□□□ 0.52
FN1-226ENST00000496542 SLC12A5Q9H2X9 1139 aa18.3■□□□□ 0.52
FN1-226ENST00000496542 USP54Q70EL1 1684 aa18.3■□□□□ 0.52
FN1-226ENST00000496542 CAMKK2Q96RR4 588 aa18.29■□□□□ 0.52
FN1-226ENST00000496542 LRP5O75197 1615 aa18.29■□□□□ 0.52
FN1-226ENST00000496542 USP31Q70CQ4 1352 aa18.29■□□□□ 0.52
FN1-226ENST00000496542 R3HDM1Q15032 1099 aaKnown RBP18.28■□□□□ 0.52
FN1-226ENST00000496542 OVOS2A0A0G2JMS6 1433 aa18.28■□□□□ 0.52
FN1-226ENST00000496542 OVOS2A0A0J9YW53 1432 aa18.28■□□□□ 0.52
FN1-226ENST00000496542 OVOS2Q6IE36 1432 aa18.28■□□□□ 0.52
FN1-226ENST00000496542 EDC4Q6P2E9 1401 aaKnown RBP18.28■□□□□ 0.52
FN1-226ENST00000496542 A0A1W2PP64 1363 aa18.28■□□□□ 0.52
FN1-226ENST00000496542 ABCC6O95255 1503 aa18.28■□□□□ 0.52
FN1-226ENST00000496542 LTN1O94822 1766 aa18.27■□□□□ 0.52
FN1-226ENST00000496542 PEAK1Q9H792 1746 aa18.27■□□□□ 0.52
FN1-226ENST00000496542 ST20-MTHFSA0A0A6YYL1 179 aa18.27■□□□□ 0.52
FN1-226ENST00000496542 DDB1Q16531 1140 aa18.27■□□□□ 0.52
FN1-226ENST00000496542 TERF2IPQ9NYB0 399 aa18.27■□□□□ 0.52
FN1-226ENST00000496542 PARD3Q8TEW0 1356 aa18.27■□□□□ 0.51
FN1-226ENST00000496542 RREB1Q92766 1687 aa18.26■□□□□ 0.51
FN1-226ENST00000496542 TESK2Q96S53 571 aa18.26■□□□□ 0.51
FN1-226ENST00000496542 PUS7Q96PZ0 661 aaKnown RBP18.25■□□□□ 0.51
FN1-226ENST00000496542 CARD10Q9BWT7 1032 aa18.25■□□□□ 0.51
FN1-226ENST00000496542 NUP188Q5SRE5 1749 aa18.25■□□□□ 0.51
FN1-226ENST00000496542 SBF2Q86WG5 1849 aa18.25■□□□□ 0.51
FN1-226ENST00000496542 C11orf95C9JLR9 678 aaPredicted RBP18.24■□□□□ 0.51
FN1-226ENST00000496542 CDCA7Q9BWT1 371 aaPredicted RBP18.24■□□□□ 0.51
FN1-226ENST00000496542 NINLQ9Y2I6 1382 aa18.23■□□□□ 0.51
FN1-226ENST00000496542 CCDC7Q96M83 1385 aa18.22■□□□□ 0.51
FN1-226ENST00000496542 USP47Q96K76 1375 aa18.21■□□□□ 0.51
FN1-226ENST00000496542 MARCH10Q8NA82 808 aaPredicted RBP18.21■□□□□ 0.51
FN1-226ENST00000496542 NLRP2Q9NX02 1062 aa18.2■□□□□ 0.5
FN1-226ENST00000496542 ERBB3P21860 1342 aa18.2■□□□□ 0.5
FN1-226ENST00000496542 TNS2Q63HR2 1409 aa18.18■□□□□ 0.5
FN1-226ENST00000496542 RGPD3A6NKT7 1758 aaPredicted RBP18.18■□□□□ 0.5
FN1-226ENST00000496542 RGPD4Q7Z3J3 1758 aa18.18■□□□□ 0.5
FN1-226ENST00000496542 SLC24A1O60721 1099 aa18.18■□□□□ 0.5
FN1-226ENST00000496542 NBPF14Q5TI25 921 aa18.18■□□□□ 0.5
FN1-226ENST00000496542 ANKRD24Q8TF21 1146 aa18.18■□□□□ 0.5
FN1-226ENST00000496542 EXOC5O00471 708 aa18.17■□□□□ 0.5
FN1-226ENST00000496542 PTF1AQ7RTS3 328 aa18.17■□□□□ 0.5
FN1-226ENST00000496542 TMF1P82094 1093 aa18.16■□□□□ 0.5
FN1-226ENST00000496542 BCL11BQ9C0K0 894 aaPredicted RBP18.16■□□□□ 0.5
FN1-226ENST00000496542 ANKRD36BQ8N2N9 1353 aa18.16■□□□□ 0.5
FN1-226ENST00000496542 BCL9O00512 1426 aa18.15■□□□□ 0.5
FN1-226ENST00000496542 KAT6BQ8WYB5 2073 aa18.15■□□□□ 0.5
FN1-226ENST00000496542 COG3Q96JB2 828 aa18.15■□□□□ 0.5
FN1-226ENST00000496542 PCGF6Q9BYE7 350 aa18.14■□□□□ 0.49
FN1-226ENST00000496542 PLSCR1O15162 318 aa18.13■□□□□ 0.49
FN1-226ENST00000496542 IL2RBP14784 551 aa18.13■□□□□ 0.49
FN1-226ENST00000496542 LTV1Q96GA3 475 aaPredicted RBP18.13■□□□□ 0.49
FN1-226ENST00000496542 IP6K1Q92551 441 aa18.12■□□□□ 0.49
FN1-226ENST00000496542 FAM208AQ9UK61 1670 aaKnown RBP18.12■□□□□ 0.49
FN1-226ENST00000496542 MAP3K19Q56UN5 1328 aa18.11■□□□□ 0.49
FN1-226ENST00000496542 NHSQ6T4R5 1651 aa18.1■□□□□ 0.49
FN1-226ENST00000496542 FBLN1P23142 703 aa18.1■□□□□ 0.49
FN1-226ENST00000496542 AMPHP49418 695 aa18.09■□□□□ 0.49
FN1-226ENST00000496542 CDCA8Q53HL2 280 aa18.09■□□□□ 0.49
FN1-226ENST00000496542 ACSBG1Q96GR2 724 aa18.09■□□□□ 0.49
FN1-226ENST00000496542 ANO8Q9HCE9 1232 aaPredicted RBP18.09■□□□□ 0.49
FN1-226ENST00000496542 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
FN1-226ENST00000496542 KCNQ2O43526 872 aa18.08■□□□□ 0.48
FN1-226ENST00000496542 HOXC9P31274 260 aa18.08■□□□□ 0.48
FN1-226ENST00000496542 GGNBP2Q9H3C7 697 aa18.08■□□□□ 0.48
FN1-226ENST00000496542 RGPD2P0DJD1 1756 aa18.07■□□□□ 0.48
FN1-226ENST00000496542 CLSPNQ9HAW4 1339 aa18.07■□□□□ 0.48
FN1-226ENST00000496542 MYOM1P52179 1685 aa18.07■□□□□ 0.48
FN1-226ENST00000496542 PROM2Q8N271 834 aa18.07■□□□□ 0.48
FN1-226ENST00000496542 TIMELESSQ9UNS1 1208 aa18.07■□□□□ 0.48
FN1-226ENST00000496542 FYB1O15117 783 aa18.06■□□□□ 0.48
FN1-226ENST00000496542 RRS1Q15050 365 aaKnown RBP18.06■□□□□ 0.48
FN1-226ENST00000496542 RTL1A6NKG5 1358 aa18.05■□□□□ 0.48
FN1-226ENST00000496542 BTAF1O14981 1849 aa18.05■□□□□ 0.48
FN1-226ENST00000496542 TXNRD1Q16881 649 aa18.05■□□□□ 0.48
FN1-226ENST00000496542 SPON1Q9HCB6 807 aa18.04■□□□□ 0.48
FN1-226ENST00000496542 DDX54Q8TDD1 881 aaKnown RBP18.03■□□□□ 0.48
FN1-226ENST00000496542 CASZ1Q86V15 1759 aa18.03■□□□□ 0.48
FN1-226ENST00000496542 NSD3Q9BZ95 1437 aa18.02■□□□□ 0.48
FN1-226ENST00000496542 STK32BQ9NY57 414 aa18.02■□□□□ 0.48
FN1-226ENST00000496542 PPP1R1BQ9UD71 204 aaPredicted RBP18.02■□□□□ 0.48
FN1-226ENST00000496542 SMG6Q86US8 1419 aaKnown RBP18■□□□□ 0.47
FN1-226ENST00000496542 MEGF6O75095 1541 aa18■□□□□ 0.47
FN1-226ENST00000496542 CARD14Q9BXL6 1004 aa18■□□□□ 0.47
FN1-226ENST00000496542 PDGFDQ9GZP0 370 aaPredicted RBP18■□□□□ 0.47
FN1-226ENST00000496542 SHANK3Q9BYB0 1731 aa18■□□□□ 0.47
FN1-226ENST00000496542 USHBP1Q8N6Y0 703 aa17.99■□□□□ 0.47
FN1-226ENST00000496542 POLR3GLQ9BT43 218 aa17.99■□□□□ 0.47
FN1-226ENST00000496542 DOT1LQ8TEK3 1739 aa17.98■□□□□ 0.47
FN1-226ENST00000496542 FLT4P35916 1363 aa17.97■□□□□ 0.47
FN1-226ENST00000496542 ZBTB7AO95365 584 aa17.97■□□□□ 0.47
FN1-226ENST00000496542 SLC15A2Q16348 729 aa17.97■□□□□ 0.47
FN1-226ENST00000496542 HSP90AB2PQ58FF8 381 aa17.97■□□□□ 0.47
FN1-226ENST00000496542 NBPF6Q5VWK0 638 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms