RNA–Protein interactions for RNA: ENST00000496216.5

STX1A-213, Transcript of syntaxin 1A, humanhuman

TSL 5

Gene STX1A, Length 714 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-213ENST00000496216 ARHGEF28Q8N1W1 1705 aaKnown RBP21.74■■□□□ 1.07
STX1A-213ENST00000496216 PPIP5K1Q6PFW1 1433 aa21.73■■□□□ 1.07
STX1A-213ENST00000496216 FHDC1Q9C0D6 1143 aaPredicted RBP21.73■■□□□ 1.07
STX1A-213ENST00000496216 WDR17Q8IZU2 1322 aa21.73■■□□□ 1.07
STX1A-213ENST00000496216 PEAK1Q9H792 1746 aa21.72■■□□□ 1.07
STX1A-213ENST00000496216 TOPAZ1Q8N9V7 1692 aa21.72■■□□□ 1.07
STX1A-213ENST00000496216 SENP3-EIF4A1A0A087X0R7 540 aa21.71■■□□□ 1.07
STX1A-213ENST00000496216 EXOC5O00471 708 aa21.71■■□□□ 1.07
STX1A-213ENST00000496216 PTF1AQ7RTS3 328 aa21.71■■□□□ 1.07
STX1A-213ENST00000496216 C1QTNF8P60827 252 aa21.7■■□□□ 1.06
STX1A-213ENST00000496216 CASZ1Q86V15 1759 aa21.69■■□□□ 1.06
STX1A-213ENST00000496216 KCNH5Q8NCM2 988 aa21.69■■□□□ 1.06
STX1A-213ENST00000496216 CARD10Q9BWT7 1032 aa21.69■■□□□ 1.06
STX1A-213ENST00000496216 CABP1Q9NZU7 370 aa21.69■■□□□ 1.06
STX1A-213ENST00000496216 CABP2Q9NPB3 220 aa21.68■■□□□ 1.06
STX1A-213ENST00000496216 CENPJQ9HC77 1338 aaPredicted RBP21.68■■□□□ 1.06
STX1A-213ENST00000496216 AXIN2Q9Y2T1 843 aa21.67■■□□□ 1.06
STX1A-213ENST00000496216 USP6P35125 1406 aa21.66■■□□□ 1.06
STX1A-213ENST00000496216 CSB-PGBD3P0DP91 1061 aa21.66■■□□□ 1.06
STX1A-213ENST00000496216 ARXQ96QS3 562 aa21.66■■□□□ 1.06
STX1A-213ENST00000496216 SGIP1Q9BQI5 828 aa21.66■■□□□ 1.06
STX1A-213ENST00000496216 LRRC37A3O60309 1634 aa21.66■■□□□ 1.06
STX1A-213ENST00000496216 ARHGEF25Q86VW2 580 aa21.65■■□□□ 1.06
STX1A-213ENST00000496216 SLIT3O75094 1523 aa21.65■■□□□ 1.06
STX1A-213ENST00000496216 ZNF692Q9BU19 519 aaPredicted RBP21.64■■□□□ 1.05
STX1A-213ENST00000496216 CCDC7Q96M83 1385 aa21.62■■□□□ 1.05
STX1A-213ENST00000496216 MAP3K5Q99683 1374 aa21.62■■□□□ 1.05
STX1A-213ENST00000496216 NBPF1Q3BBV0 1214 aa21.62■■□□□ 1.05
STX1A-213ENST00000496216 MYOM1P52179 1685 aa21.62■■□□□ 1.05
STX1A-213ENST00000496216 SBF2Q86WG5 1849 aa21.62■■□□□ 1.05
STX1A-213ENST00000496216 CPSF1Q10570 1443 aaKnown RBP21.61■■□□□ 1.05
STX1A-213ENST00000496216 GPR162Q16538 588 aa21.59■■□□□ 1.05
STX1A-213ENST00000496216 KIAA1210Q9ULL0 1709 aa21.58■■□□□ 1.04
STX1A-213ENST00000496216 EVC2Q86UK5 1308 aa21.57■■□□□ 1.04
STX1A-213ENST00000496216 IFFO2Q5TF58 517 aa21.57■■□□□ 1.04
STX1A-213ENST00000496216 SLC16A10Q8TF71 515 aa21.57■■□□□ 1.04
STX1A-213ENST00000496216 TTC21BQ7Z4L5 1316 aa21.56■■□□□ 1.04
STX1A-213ENST00000496216 TTC21AQ8NDW8 1320 aa21.56■■□□□ 1.04
STX1A-213ENST00000496216 GIGYF1O75420 1035 aaPredicted RBP21.56■■□□□ 1.04
STX1A-213ENST00000496216 COL18A1P39060 1754 aa21.54■■□□□ 1.04
STX1A-213ENST00000496216 POLD1P28340 1107 aa21.54■■□□□ 1.04
STX1A-213ENST00000496216 TNS2Q63HR2 1409 aa21.54■■□□□ 1.04
STX1A-213ENST00000496216 ACSBG1Q96GR2 724 aa21.53■■□□□ 1.04
STX1A-213ENST00000496216 SOX12O15370 315 aa21.52■■□□□ 1.04
STX1A-213ENST00000496216 IL2RBP14784 551 aa21.51■■□□□ 1.03
STX1A-213ENST00000496216 AKAP12Q02952 1782 aa21.51■■□□□ 1.03
STX1A-213ENST00000496216 SLC27A3Q5K4L6 730 aa21.49■■□□□ 1.03
STX1A-213ENST00000496216 NLRP2Q9NX02 1062 aa21.49■■□□□ 1.03
STX1A-213ENST00000496216 ABCC6O95255 1503 aa21.49■■□□□ 1.03
STX1A-213ENST00000496216 CHD4Q14839 1912 aa21.48■■□□□ 1.03
STX1A-213ENST00000496216 WNK3Q9BYP7 1800 aa21.48■■□□□ 1.03
STX1A-213ENST00000496216 PIK3C2AO00443 1686 aa21.47■■□□□ 1.03
STX1A-213ENST00000496216 ZNF827Q17R98 1081 aa21.47■■□□□ 1.03
STX1A-213ENST00000496216 TRPM1Q7Z4N2 1603 aa21.47■■□□□ 1.03
STX1A-213ENST00000496216 GRIN3BO60391 1043 aa21.46■■□□□ 1.03
STX1A-213ENST00000496216 KLHL34Q8N239 644 aa21.46■■□□□ 1.03
STX1A-213ENST00000496216 AKT1S1Q96B36 256 aa21.46■■□□□ 1.03
STX1A-213ENST00000496216 LRRC4BQ9NT99 713 aa21.46■■□□□ 1.03
STX1A-213ENST00000496216 UTRNP46939 3433 aa21.45■■□□□ 1.02
STX1A-213ENST00000496216 PELP1Q8IZL8 1130 aaKnown RBP21.45■■□□□ 1.02
STX1A-213ENST00000496216 ERBB3P21860 1342 aa21.45■■□□□ 1.02
STX1A-213ENST00000496216 KTN1Q86UP2 1357 aaKnown RBP21.45■■□□□ 1.02
STX1A-213ENST00000496216 NHSQ6T4R5 1651 aa21.44■■□□□ 1.02
STX1A-213ENST00000496216 QRICH2Q9H0J4 1663 aa21.44■■□□□ 1.02
STX1A-213ENST00000496216 NFAT5O94916 1531 aa21.42■■□□□ 1.02
STX1A-213ENST00000496216 TFCP2L1Q9NZI6 479 aa21.42■■□□□ 1.02
STX1A-213ENST00000496216 PAPPAQ13219 1627 aa21.41■■□□□ 1.02
STX1A-213ENST00000496216 USP31Q70CQ4 1352 aa21.41■■□□□ 1.02
STX1A-213ENST00000496216 ANKRD24Q8TF21 1146 aa21.4■■□□□ 1.02
STX1A-213ENST00000496216 PNPLA7Q6ZV29 1317 aa21.39■■□□□ 1.01
STX1A-213ENST00000496216 HMGB2P26583 209 aaKnown RBP21.37■■□□□ 1.01
STX1A-213ENST00000496216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.37■■□□□ 1.01
STX1A-213ENST00000496216 DDX54Q8TDD1 881 aaKnown RBP21.36■■□□□ 1.01
STX1A-213ENST00000496216 NLGN2Q8NFZ4 835 aa21.35■■□□□ 1.01
STX1A-213ENST00000496216 RGPD5Q99666 1765 aa21.35■■□□□ 1.01
STX1A-213ENST00000496216 L3MBTL2Q969R5 705 aa21.34■■□□□ 1.01
STX1A-213ENST00000496216 SYTL4Q96C24 671 aaPredicted RBP21.33■■□□□ 1.01
STX1A-213ENST00000496216 HDGFL2Q7Z4V5 671 aaPredicted RBP21.32■■□□□ 1
STX1A-213ENST00000496216 NME9Q86XW9 330 aa21.32■■□□□ 1
STX1A-213ENST00000496216 YBX3P16989 372 aaKnown RBP eCLIP21.31■■□□□ 1
STX1A-213ENST00000496216 PRIM1P49642 420 aaKnown RBP21.31■■□□□ 1
STX1A-213ENST00000496216 IP6K1Q92551 441 aa21.31■■□□□ 1
STX1A-213ENST00000496216 ROCK2O75116 1388 aaKnown RBP21.31■■□□□ 1
STX1A-213ENST00000496216 BTAF1O14981 1849 aa21.31■■□□□ 1
STX1A-213ENST00000496216 ANKRD36BQ8N2N9 1353 aa21.3■■□□□ 1
STX1A-213ENST00000496216 MSH5O43196 834 aa21.29■■□□□ 1
STX1A-213ENST00000496216 GPBP1L1Q9HC44 474 aaPredicted RBP21.29■■□□□ 1
STX1A-213ENST00000496216 CCNL1Q9UK58 526 aaPredicted RBP21.29■■□□□ 1
STX1A-213ENST00000496216 CD2APQ9Y5K6 639 aa21.28■■□□□ 1
STX1A-213ENST00000496216 QSER1Q2KHR3 1735 aa21.28■■□□□ 1
STX1A-213ENST00000496216 SBNO2Q9Y2G9 1366 aa21.27■■□□□ 1
STX1A-213ENST00000496216 KCNQ4P56696 695 aa21.27■■□□□ 1
STX1A-213ENST00000496216 FLAD1Q8NFF5 587 aa21.27■■□□□ 1
STX1A-213ENST00000496216 TERF2IPQ9NYB0 399 aa21.27■■□□□ 1
STX1A-213ENST00000496216 SHANK3Q9BYB0 1731 aa21.26■□□□□ 0.99
STX1A-213ENST00000496216 HSPA6P17066 643 aa21.26■□□□□ 0.99
STX1A-213ENST00000496216 ZCRB1Q8TBF4 217 aaKnown RBP21.26■□□□□ 0.99
STX1A-213ENST00000496216 TMC1Q8TDI8 760 aa21.26■□□□□ 0.99
STX1A-213ENST00000496216 COL24A1Q17RW2 1714 aa21.26■□□□□ 0.99
STX1A-213ENST00000496216 COL23A1Q86Y22 540 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms