RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, human

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD50-208	ENST00000496204	ERBB4	Q15303	1308 aa		6.32	□□□□□ -1.4
RAD50-208	ENST00000496204	C6orf118	Q5T5N4	469 aa		6.32	□□□□□ -1.4
RAD50-208	ENST00000496204	CCDC116	Q8IYX3	515 aa		6.32	□□□□□ -1.4
RAD50-208	ENST00000496204	LINC00528	Q8N1L1	170 aa		6.32	□□□□□ -1.4
RAD50-208	ENST00000496204	TRIM34	Q9BYJ4	488 aa		6.32	□□□□□ -1.4
RAD50-208	ENST00000496204	LOR	P23490	312 aa	Predicted RBP	6.31	□□□□□ -1.4
RAD50-208	ENST00000496204	BRPF1	P55201	1214 aa	Predicted RBP	6.31	□□□□□ -1.4
RAD50-208	ENST00000496204	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	6.31	□□□□□ -1.4
RAD50-208	ENST00000496204	IL27	Q8NEV9	243 aa		6.31	□□□□□ -1.4
RAD50-208	ENST00000496204	GPSM3	Q9Y4H4	160 aa		6.31	□□□□□ -1.4
RAD50-208	ENST00000496204	EMILIN1	Q9Y6C2	1016 aa		6.31	□□□□□ -1.4
RAD50-208	ENST00000496204	SOS2	Q07890	1332 aa	Predicted RBP	6.3	□□□□□ -1.4
RAD50-208	ENST00000496204	GMPR	P36959	345 aa		6.3	□□□□□ -1.4
RAD50-208	ENST00000496204	PTK2	Q05397	1052 aa		6.3	□□□□□ -1.4
RAD50-208	ENST00000496204		Q6ZVU0	165 aa		6.3	□□□□□ -1.4
RAD50-208	ENST00000496204	ADAM32	Q8TC27	787 aa		6.3	□□□□□ -1.4
RAD50-208	ENST00000496204	KCTD15	Q96SI1	283 aa	Predicted RBP	6.3	□□□□□ -1.4
RAD50-208	ENST00000496204	ATP1B4	Q9UN42	357 aa	Predicted RBP	6.3	□□□□□ -1.4
RAD50-208	ENST00000496204	BMP2	P12643	396 aa		6.29	□□□□□ -1.4
RAD50-208	ENST00000496204	CBLB	Q13191	982 aa		6.29	□□□□□ -1.4
RAD50-208	ENST00000496204	NEUROD2	Q15784	382 aa		6.29	□□□□□ -1.4
RAD50-208	ENST00000496204	INTS6L	Q5JSJ4	861 aa	Known RBP	6.29	□□□□□ -1.4
RAD50-208	ENST00000496204	ZBTB33	Q86T24	672 aa		6.29	□□□□□ -1.4
RAD50-208	ENST00000496204	SLC16A10	Q8TF71	515 aa		6.29	□□□□□ -1.4
RAD50-208	ENST00000496204	SLC10A4	Q96EP9	437 aa		6.29	□□□□□ -1.4
RAD50-208	ENST00000496204	DNMT3L	Q9UJW3	386 aa		6.29	□□□□□ -1.4
RAD50-208	ENST00000496204	INSM1	Q01101	510 aa	Predicted RBP	6.28	□□□□□ -1.4
RAD50-208	ENST00000496204	GJD4	Q96KN9	370 aa	Predicted RBP	6.28	□□□□□ -1.4
RAD50-208	ENST00000496204	PCMTD1	Q96MG8	357 aa	Predicted RBP	6.28	□□□□□ -1.4
RAD50-208	ENST00000496204	CDV3	Q9UKY7	258 aa	Known RBP	6.28	□□□□□ -1.4
RAD50-208	ENST00000496204	MAN1A2	O60476	641 aa		6.27	□□□□□ -1.41
RAD50-208	ENST00000496204	VSIG8	P0DPA2	414 aa		6.27	□□□□□ -1.41
RAD50-208	ENST00000496204	TMEM259	Q4ZIN3	620 aa		6.27	□□□□□ -1.41
RAD50-208	ENST00000496204	IRF7	Q92985	503 aa		6.27	□□□□□ -1.41
RAD50-208	ENST00000496204	TSEN34	Q9BSV6	310 aa	Known RBP	6.27	□□□□□ -1.41
RAD50-208	ENST00000496204	UPP2	O95045	317 aa		6.26	□□□□□ -1.41
RAD50-208	ENST00000496204	PGPEP1	Q9NXJ5	209 aa		6.26	□□□□□ -1.41
RAD50-208	ENST00000496204	STK17A	Q9UEE5	414 aa		6.26	□□□□□ -1.41
RAD50-208	ENST00000496204	ESPN	B1AK53	854 aa		6.25	□□□□□ -1.41
RAD50-208	ENST00000496204	SPINT1	O43278	529 aa		6.25	□□□□□ -1.41
RAD50-208	ENST00000496204	PPFIA3	O75145	1194 aa		6.25	□□□□□ -1.41
RAD50-208	ENST00000496204	KDF1	Q8NAX2	398 aa	Predicted RBP	6.25	□□□□□ -1.41
RAD50-208	ENST00000496204	TMPRSS4	Q9NRS4	437 aa		6.25	□□□□□ -1.41
RAD50-208	ENST00000496204	TTLL8	A6PVC2	850 aa		6.24	□□□□□ -1.41
RAD50-208	ENST00000496204	GPR37L1	O60883	481 aa		6.24	□□□□□ -1.41
RAD50-208	ENST00000496204	LILRA1	O75019	489 aa		6.24	□□□□□ -1.41
RAD50-208	ENST00000496204	ADD1	P35611	737 aa	Known RBP	6.24	□□□□□ -1.41
RAD50-208	ENST00000496204	DHX9	Q08211	1270 aa	Known RBP	6.24	□□□□□ -1.41
RAD50-208	ENST00000496204	AGBL1	Q96MI9	1066 aa		6.24	□□□□□ -1.41
RAD50-208	ENST00000496204	ERVH48-1	M5A8F1	160 aa		6.23	□□□□□ -1.41
RAD50-208	ENST00000496204	NBPF20	Q3BBV1	942 aa		6.23	□□□□□ -1.41
RAD50-208	ENST00000496204	ZNF784	Q8NCA9	323 aa	Predicted RBP	6.23	□□□□□ -1.41
RAD50-208	ENST00000496204	PNMA1	Q8ND90	353 aa		6.23	□□□□□ -1.41
RAD50-208	ENST00000496204	FBXO45	P0C2W1	286 aa		6.22	□□□□□ -1.41
RAD50-208	ENST00000496204	CTSO	P43234	321 aa	Predicted RBP	6.22	□□□□□ -1.41
RAD50-208	ENST00000496204	DZIP3	Q86Y13	1208 aa	Known RBP	6.22	□□□□□ -1.41
RAD50-208	ENST00000496204	FIGNL2	A6NMB9	653 aa		6.21	□□□□□ -1.42
RAD50-208	ENST00000496204	ZBBX	A8MT70	800 aa		6.21	□□□□□ -1.42
RAD50-208	ENST00000496204	PTS	Q03393	145 aa		6.21	□□□□□ -1.42
RAD50-208	ENST00000496204	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	6.21	□□□□□ -1.42
RAD50-208	ENST00000496204	RAB15	P59190	212 aa		6.2	□□□□□ -1.42
RAD50-208	ENST00000496204	RELB	Q01201	579 aa		6.2	□□□□□ -1.42
RAD50-208	ENST00000496204	TPRN	Q4KMQ1	711 aa		6.2	□□□□□ -1.42
RAD50-208	ENST00000496204	GPR161	Q8N6U8	529 aa	Known RBP	6.2	□□□□□ -1.42
RAD50-208	ENST00000496204	ZSCAN1	Q8NBB4	408 aa		6.2	□□□□□ -1.42
RAD50-208	ENST00000496204	MTMR14	Q8NCE2	650 aa		6.2	□□□□□ -1.42
RAD50-208	ENST00000496204	BANK1	Q8NDB2	785 aa		6.2	□□□□□ -1.42
RAD50-208	ENST00000496204	INSM2	Q96T92	566 aa	Predicted RBP	6.2	□□□□□ -1.42
RAD50-208	ENST00000496204	SOCS7	O14512	581 aa		6.19	□□□□□ -1.42
RAD50-208	ENST00000496204	GIGYF1	O75420	1035 aa	Predicted RBP	6.19	□□□□□ -1.42
RAD50-208	ENST00000496204	ADH1A	P07327	375 aa		6.19	□□□□□ -1.42
RAD50-208	ENST00000496204	KRT76	Q01546	638 aa		6.19	□□□□□ -1.42
RAD50-208	ENST00000496204	SEPT12	Q8IYM1	358 aa		6.19	□□□□□ -1.42
RAD50-208	ENST00000496204	ZNF395	Q9H8N7	513 aa	Predicted RBP	6.19	□□□□□ -1.42
RAD50-208	ENST00000496204	SNRK	Q9NRH2	765 aa		6.19	□□□□□ -1.42
RAD50-208	ENST00000496204	SLC35F4	A4IF30	521 aa		6.18	□□□□□ -1.42
RAD50-208	ENST00000496204	FOXD4L5	Q5VV16	416 aa	Predicted RBP	6.18	□□□□□ -1.42
RAD50-208	ENST00000496204	RNF217	Q8TC41	542 aa		6.18	□□□□□ -1.42
RAD50-208	ENST00000496204	SENP3-EIF4A1	A0A087X0R7	540 aa		6.17	□□□□□ -1.42
RAD50-208	ENST00000496204	PTGIR	P43119	386 aa		6.17	□□□□□ -1.42
RAD50-208	ENST00000496204	CCDC155	Q8N6L0	562 aa		6.17	□□□□□ -1.42
RAD50-208	ENST00000496204	NANOS1	Q8WY41	292 aa	Known RBP	6.17	□□□□□ -1.42
RAD50-208	ENST00000496204	CYLD	Q9NQC7	956 aa		6.17	□□□□□ -1.42
RAD50-208	ENST00000496204	PCDHB9	Q9Y5E1	797 aa		6.17	□□□□□ -1.42
RAD50-208	ENST00000496204	NR1H3	Q13133	447 aa		6.16	□□□□□ -1.42
RAD50-208	ENST00000496204	POLM	Q9NP87	494 aa	Predicted RBP	6.15	□□□□□ -1.42
RAD50-208	ENST00000496204	ERVK-9	P63128	1117 aa		6.14	□□□□□ -1.43
RAD50-208	ENST00000496204	ITGA6	P23229	1130 aa		6.13	□□□□□ -1.43
RAD50-208	ENST00000496204	SCTR	P47872	440 aa		6.13	□□□□□ -1.43
RAD50-208	ENST00000496204	RNF144A	P50876	292 aa	Predicted RBP	6.13	□□□□□ -1.43
RAD50-208	ENST00000496204	RNFT1	Q5M7Z0	435 aa		6.13	□□□□□ -1.43
RAD50-208	ENST00000496204	NDUFB9	Q9Y6M9	179 aa		6.13	□□□□□ -1.43
RAD50-208	ENST00000496204	FAM181B	A6NEQ2	426 aa		6.12	□□□□□ -1.43
RAD50-208	ENST00000496204	MCCD1	P59942	119 aa	Predicted RBP	6.12	□□□□□ -1.43
RAD50-208	ENST00000496204	COL25A1	Q9BXS0	654 aa	Predicted RBP	6.12	□□□□□ -1.43
RAD50-208	ENST00000496204	CUEDC1	Q9NWM3	386 aa	Predicted RBP	6.12	□□□□□ -1.43
RAD50-208	ENST00000496204		A0A1W2PRU2	124 aa		6.11	□□□□□ -1.43
RAD50-208	ENST00000496204	ATP5J2-PTCD1	G3V325	749 aa		6.11	□□□□□ -1.43
RAD50-208	ENST00000496204	TRAK2	O60296	914 aa		6.11	□□□□□ -1.43
RAD50-208	ENST00000496204	CC2D2B	Q6DHV5	1058 aa		6.11	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms