RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 RALBP1Q15311 655 aa18.31■□□□□ 0.52
PTPN7-218ENST00000496197 CDK12Q9NYV4 1490 aaPredicted RBP18.31■□□□□ 0.52
PTPN7-218ENST00000496197 MTHFSP49914 203 aa18.3■□□□□ 0.52
PTPN7-218ENST00000496197 COL3A1P02461 1466 aaPredicted RBP18.3■□□□□ 0.52
PTPN7-218ENST00000496197 SLIT2O94813 1529 aa18.3■□□□□ 0.52
PTPN7-218ENST00000496197 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.29■□□□□ 0.52
PTPN7-218ENST00000496197 PPM1GO15355 546 aaPredicted RBP18.29■□□□□ 0.52
PTPN7-218ENST00000496197 ANP32CO43423 234 aa18.29■□□□□ 0.52
PTPN7-218ENST00000496197 HOXC9P31274 260 aa18.29■□□□□ 0.52
PTPN7-218ENST00000496197 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
PTPN7-218ENST00000496197 RTL1A6NKG5 1358 aa18.28■□□□□ 0.52
PTPN7-218ENST00000496197 FLT4P35916 1363 aa18.28■□□□□ 0.52
PTPN7-218ENST00000496197 MYBBP1AQ9BQG0 1328 aaKnown RBP18.28■□□□□ 0.52
PTPN7-218ENST00000496197 HSP90AB2PQ58FF8 381 aa18.28■□□□□ 0.52
PTPN7-218ENST00000496197 COL5A2P05997 1499 aaPredicted RBP18.28■□□□□ 0.52
PTPN7-218ENST00000496197 AMPHP49418 695 aa18.27■□□□□ 0.52
PTPN7-218ENST00000496197 IP6K1Q92551 441 aa18.27■□□□□ 0.52
PTPN7-218ENST00000496197 CCDC184Q52MB2 194 aa18.26■□□□□ 0.51
PTPN7-218ENST00000496197 BCL9LQ86UU0 1499 aa18.26■□□□□ 0.51
PTPN7-218ENST00000496197 RGPD1P0DJD0 1748 aa18.26■□□□□ 0.51
PTPN7-218ENST00000496197 KIF24Q5T7B8 1368 aa18.26■□□□□ 0.51
PTPN7-218ENST00000496197 MEX3CQ5U5Q3 659 aaKnown RBP18.26■□□□□ 0.51
PTPN7-218ENST00000496197 BTG4Q9NY30 223 aa18.26■□□□□ 0.51
PTPN7-218ENST00000496197 BLMP54132 1417 aaPredicted RBP18.25■□□□□ 0.51
PTPN7-218ENST00000496197 FAM208AQ9UK61 1670 aaKnown RBP18.25■□□□□ 0.51
PTPN7-218ENST00000496197 INSRP06213 1382 aa18.24■□□□□ 0.51
PTPN7-218ENST00000496197 NGLY1Q96IV0 654 aa18.24■□□□□ 0.51
PTPN7-218ENST00000496197 MIER1Q8N108 512 aa18.23■□□□□ 0.51
PTPN7-218ENST00000496197 FNBP4Q8N3X1 1017 aaPredicted RBP18.23■□□□□ 0.51
PTPN7-218ENST00000496197 ERBB3P21860 1342 aa18.22■□□□□ 0.51
PTPN7-218ENST00000496197 AFF2P51816 1311 aa18.22■□□□□ 0.51
PTPN7-218ENST00000496197 LTV1Q96GA3 475 aaPredicted RBP18.22■□□□□ 0.51
PTPN7-218ENST00000496197 WNK3Q9BYP7 1800 aa18.21■□□□□ 0.51
PTPN7-218ENST00000496197 EIF4A2Q14240 407 aaKnown RBP18.21■□□□□ 0.51
PTPN7-218ENST00000496197 ANKRD24Q8TF21 1146 aa18.21■□□□□ 0.51
PTPN7-218ENST00000496197 STRN4Q9NRL3 753 aa18.2■□□□□ 0.5
PTPN7-218ENST00000496197 LARP1Q6PKG0 1096 aaKnown RBP18.2■□□□□ 0.5
PTPN7-218ENST00000496197 ILDR2Q71H61 639 aa18.2■□□□□ 0.5
PTPN7-218ENST00000496197 GLI3P10071 1580 aa18.18■□□□□ 0.5
PTPN7-218ENST00000496197 IL13P35225 146 aa18.18■□□□□ 0.5
PTPN7-218ENST00000496197 USP21Q9UK80 565 aa18.18■□□□□ 0.5
PTPN7-218ENST00000496197 WDR17Q8IZU2 1322 aa18.17■□□□□ 0.5
PTPN7-218ENST00000496197 UNC5CLQ8IV45 518 aa18.17■□□□□ 0.5
PTPN7-218ENST00000496197 RGS17Q9UGC6 210 aaPredicted RBP18.17■□□□□ 0.5
PTPN7-218ENST00000496197 ATRNO75882 1429 aa18.16■□□□□ 0.5
PTPN7-218ENST00000496197 CRB1P82279 1406 aa18.16■□□□□ 0.5
PTPN7-218ENST00000496197 DIAPH1O60610 1272 aaKnown RBP18.15■□□□□ 0.5
PTPN7-218ENST00000496197 NBPF6Q5VWK0 638 aa18.15■□□□□ 0.5
PTPN7-218ENST00000496197 USHBP1Q8N6Y0 703 aa18.15■□□□□ 0.5
PTPN7-218ENST00000496197 NBPF4Q96M43 638 aa18.15■□□□□ 0.5
PTPN7-218ENST00000496197 NCAPD2Q15021 1401 aa18.15■□□□□ 0.5
PTPN7-218ENST00000496197 EVA1CP58658 441 aa18.14■□□□□ 0.5
PTPN7-218ENST00000496197 EYA1Q99502 592 aa18.14■□□□□ 0.5
PTPN7-218ENST00000496197 CSB-PGBD3P0DP91 1061 aa18.14■□□□□ 0.49
PTPN7-218ENST00000496197 CFAP53Q96M91 514 aa18.14■□□□□ 0.49
PTPN7-218ENST00000496197 TOM1L2Q6ZVM7 507 aa18.13■□□□□ 0.49
PTPN7-218ENST00000496197 IGSF1Q8N6C5 1336 aa18.12■□□□□ 0.49
PTPN7-218ENST00000496197 VPS72Q15906 364 aa18.12■□□□□ 0.49
PTPN7-218ENST00000496197 AEBP1Q8IUX7 1158 aa18.12■□□□□ 0.49
PTPN7-218ENST00000496197 MRS2Q9HD23 443 aa18.12■□□□□ 0.49
PTPN7-218ENST00000496197 NLRP2Q9NX02 1062 aa18.12■□□□□ 0.49
PTPN7-218ENST00000496197 USP35Q9P2H5 1018 aa18.12■□□□□ 0.49
PTPN7-218ENST00000496197 SPATA31A5Q5VU36 1347 aa18.12■□□□□ 0.49
PTPN7-218ENST00000496197 SPATA31A7Q8IWB4 1347 aa18.12■□□□□ 0.49
PTPN7-218ENST00000496197 SHANK3Q9BYB0 1731 aa18.11■□□□□ 0.49
PTPN7-218ENST00000496197 SPATA31A1Q5TZJ5 1347 aa18.11■□□□□ 0.49
PTPN7-218ENST00000496197 PARP4Q9UKK3 1724 aaKnown RBP18.11■□□□□ 0.49
PTPN7-218ENST00000496197 U2SURPO15042 1029 aaKnown RBP18.1■□□□□ 0.49
PTPN7-218ENST00000496197 MEGF6O75095 1541 aa18.1■□□□□ 0.49
PTPN7-218ENST00000496197 THSD7AQ9UPZ6 1657 aa18.09■□□□□ 0.49
PTPN7-218ENST00000496197 HMOX1P09601 288 aa18.09■□□□□ 0.49
PTPN7-218ENST00000496197 CARD10Q9BWT7 1032 aa18.09■□□□□ 0.49
PTPN7-218ENST00000496197 QTRT2Q9H974 415 aaKnown RBP18.09■□□□□ 0.49
PTPN7-218ENST00000496197 LRRC37A3O60309 1634 aa18.09■□□□□ 0.49
PTPN7-218ENST00000496197 POTEAQ6S8J7 498 aa18.08■□□□□ 0.49
PTPN7-218ENST00000496197 TRPC5Q9UL62 973 aaPredicted RBP18.08■□□□□ 0.49
PTPN7-218ENST00000496197 CCDC9Q9Y3X0 531 aaKnown RBP18.08■□□□□ 0.49
PTPN7-218ENST00000496197 KDRP35968 1356 aa18.08■□□□□ 0.49
PTPN7-218ENST00000496197 DISP2A7MBM2 1401 aa18.08■□□□□ 0.49
PTPN7-218ENST00000496197 CCER2I3L3R5 266 aa18.07■□□□□ 0.48
PTPN7-218ENST00000496197 ZNF772Q68DY9 489 aaPredicted RBP18.07■□□□□ 0.48
PTPN7-218ENST00000496197 PKD1L3Q7Z443 1732 aa18.07■□□□□ 0.48
PTPN7-218ENST00000496197 BRWD3Q6RI45 1802 aa18.07■□□□□ 0.48
PTPN7-218ENST00000496197 SULT6B1Q6IMI4 303 aa18.07■□□□□ 0.48
PTPN7-218ENST00000496197 PNISRQ8TF01 805 aaKnown RBP18.07■□□□□ 0.48
PTPN7-218ENST00000496197 GJD4Q96KN9 370 aaPredicted RBP18.07■□□□□ 0.48
PTPN7-218ENST00000496197 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
PTPN7-218ENST00000496197 U2AF1L5P0DN76 240 aaPredicted RBP18.06■□□□□ 0.48
PTPN7-218ENST00000496197 U2AF1Q01081 240 aaKnown RBP eCLIP18.06■□□□□ 0.48
PTPN7-218ENST00000496197 SOCS7O14512 581 aa18.05■□□□□ 0.48
PTPN7-218ENST00000496197 TCP11L2Q8N4U5 519 aa18.05■□□□□ 0.48
PTPN7-218ENST00000496197 ADAMTS8Q9UP79 889 aa18.05■□□□□ 0.48
PTPN7-218ENST00000496197 RSPH6AQ9H0K4 717 aa18.04■□□□□ 0.48
PTPN7-218ENST00000496197 NUDCQ9Y266 331 aa18.04■□□□□ 0.48
PTPN7-218ENST00000496197 DLG5Q8TDM6 1919 aa18.03■□□□□ 0.48
PTPN7-218ENST00000496197 FAM98CQ17RN3 349 aaKnown RBP18.03■□□□□ 0.48
PTPN7-218ENST00000496197 OVOS2A0A0G2JMS6 1433 aa18.03■□□□□ 0.48
PTPN7-218ENST00000496197 VIRMAQ69YN4 1812 aaKnown RBP18.03■□□□□ 0.48
PTPN7-218ENST00000496197 WDR43Q15061 677 aaKnown RBP eCLIP18.01■□□□□ 0.47
PTPN7-218ENST00000496197 BARGINQ6ZT62 677 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms