RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 PTGER2P43116 358 aa14.82□□□□□ -0.04
ERGIC3-219ENST00000496172 ANO8Q9HCE9 1232 aaPredicted RBP14.82□□□□□ -0.04
ERGIC3-219ENST00000496172 WNK3Q9BYP7 1800 aa14.82□□□□□ -0.04
ERGIC3-219ENST00000496172 BCL9O00512 1426 aa14.82□□□□□ -0.04
ERGIC3-219ENST00000496172 USP35Q9P2H5 1018 aa14.81□□□□□ -0.04
ERGIC3-219ENST00000496172 COL5A2P05997 1499 aaPredicted RBP14.81□□□□□ -0.04
ERGIC3-219ENST00000496172 LARP1Q6PKG0 1096 aaKnown RBP14.8□□□□□ -0.04
ERGIC3-219ENST00000496172 NLRP13Q86W25 1043 aa14.8□□□□□ -0.04
ERGIC3-219ENST00000496172 ZNF692Q9BU19 519 aaPredicted RBP14.8□□□□□ -0.04
ERGIC3-219ENST00000496172 CEP350Q5VT06 3117 aa14.79□□□□□ -0.04
ERGIC3-219ENST00000496172 USP19O94966 1318 aa14.79□□□□□ -0.04
ERGIC3-219ENST00000496172 ZC3H6P61129 1189 aaKnown RBP14.79□□□□□ -0.04
ERGIC3-219ENST00000496172 MAP3K5Q99683 1374 aa14.79□□□□□ -0.04
ERGIC3-219ENST00000496172 SBNO2Q9Y2G9 1366 aa14.79□□□□□ -0.04
ERGIC3-219ENST00000496172 AKAP12Q02952 1782 aa14.78□□□□□ -0.04
ERGIC3-219ENST00000496172 CRB1P82279 1406 aa14.78□□□□□ -0.04
ERGIC3-219ENST00000496172 AATKQ6ZMQ8 1374 aa14.78□□□□□ -0.04
ERGIC3-219ENST00000496172 CLSPNQ9HAW4 1339 aa14.78□□□□□ -0.04
ERGIC3-219ENST00000496172 SLC24A1O60721 1099 aa14.78□□□□□ -0.04
ERGIC3-219ENST00000496172 EVA1CP58658 441 aa14.78□□□□□ -0.04
ERGIC3-219ENST00000496172 TIMELESSQ9UNS1 1208 aa14.78□□□□□ -0.04
ERGIC3-219ENST00000496172 USP6P35125 1406 aa14.77□□□□□ -0.04
ERGIC3-219ENST00000496172 SYT17Q9BSW7 474 aa14.77□□□□□ -0.05
ERGIC3-219ENST00000496172 NLRP6P59044 892 aa14.76□□□□□ -0.05
ERGIC3-219ENST00000496172 SGIP1Q9BQI5 828 aa14.76□□□□□ -0.05
ERGIC3-219ENST00000496172 BCL11BQ9C0K0 894 aaPredicted RBP14.76□□□□□ -0.05
ERGIC3-219ENST00000496172 PDGFDQ9GZP0 370 aaPredicted RBP14.76□□□□□ -0.05
ERGIC3-219ENST00000496172 TMC1Q8TDI8 760 aa14.75□□□□□ -0.05
ERGIC3-219ENST00000496172 FHDC1Q9C0D6 1143 aaPredicted RBP14.75□□□□□ -0.05
ERGIC3-219ENST00000496172 ZBTB7AO95365 584 aa14.74□□□□□ -0.05
ERGIC3-219ENST00000496172 GCP02774 474 aa14.74□□□□□ -0.05
ERGIC3-219ENST00000496172 PROM2Q8N271 834 aa14.74□□□□□ -0.05
ERGIC3-219ENST00000496172 PAPPAQ13219 1627 aa14.74□□□□□ -0.05
ERGIC3-219ENST00000496172 ST20-MTHFSA0A0A6YYL1 179 aa14.73□□□□□ -0.05
ERGIC3-219ENST00000496172 HDGFL2Q7Z4V5 671 aaPredicted RBP14.73□□□□□ -0.05
ERGIC3-219ENST00000496172 PUS7Q96PZ0 661 aaKnown RBP14.73□□□□□ -0.05
ERGIC3-219ENST00000496172 MTFR1LQ9H019 292 aa14.73□□□□□ -0.05
ERGIC3-219ENST00000496172 KTN1Q86UP2 1357 aaKnown RBP14.73□□□□□ -0.05
ERGIC3-219ENST00000496172 TTC21BQ7Z4L5 1316 aa14.72□□□□□ -0.05
ERGIC3-219ENST00000496172 TTC21AQ8NDW8 1320 aa14.72□□□□□ -0.05
ERGIC3-219ENST00000496172 CCER1Q8TC90 406 aaPredicted RBP14.72□□□□□ -0.05
ERGIC3-219ENST00000496172 COL24A1Q17RW2 1714 aa14.72□□□□□ -0.05
ERGIC3-219ENST00000496172 COL18A1P39060 1754 aa14.71□□□□□ -0.05
ERGIC3-219ENST00000496172 ZBTB7CA1YPR0 619 aa14.71□□□□□ -0.05
ERGIC3-219ENST00000496172 TERF2IPQ9NYB0 399 aa14.71□□□□□ -0.05
ERGIC3-219ENST00000496172 CPSF1Q10570 1443 aaKnown RBP14.71□□□□□ -0.05
ERGIC3-219ENST00000496172 SLIT3O75094 1523 aa14.71□□□□□ -0.06
ERGIC3-219ENST00000496172 SHANK3Q9BYB0 1731 aa14.7□□□□□ -0.06
ERGIC3-219ENST00000496172 SLC15A2Q16348 729 aa14.7□□□□□ -0.06
ERGIC3-219ENST00000496172 DDB1Q16531 1140 aa14.7□□□□□ -0.06
ERGIC3-219ENST00000496172 KCNH5Q8NCM2 988 aa14.7□□□□□ -0.06
ERGIC3-219ENST00000496172 STK32BQ9NY57 414 aa14.7□□□□□ -0.06
ERGIC3-219ENST00000496172 NHSQ6T4R5 1651 aa14.69□□□□□ -0.06
ERGIC3-219ENST00000496172 GIGYF1O75420 1035 aaPredicted RBP14.69□□□□□ -0.06
ERGIC3-219ENST00000496172 PTF1AQ7RTS3 328 aa14.69□□□□□ -0.06
ERGIC3-219ENST00000496172 TESK2Q96S53 571 aa14.69□□□□□ -0.06
ERGIC3-219ENST00000496172 SLC12A5Q9H2X9 1139 aa14.69□□□□□ -0.06
ERGIC3-219ENST00000496172 ATF5Q9Y2D1 282 aaPredicted RBP14.69□□□□□ -0.06
ERGIC3-219ENST00000496172 USP47Q96K76 1375 aa14.69□□□□□ -0.06
ERGIC3-219ENST00000496172 QSER1Q2KHR3 1735 aa14.69□□□□□ -0.06
ERGIC3-219ENST00000496172 TMF1P82094 1093 aa14.68□□□□□ -0.06
ERGIC3-219ENST00000496172 TXNRD1Q16881 649 aa14.68□□□□□ -0.06
ERGIC3-219ENST00000496172 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.68□□□□□ -0.06
ERGIC3-219ENST00000496172 CDCA7Q9BWT1 371 aaPredicted RBP14.68□□□□□ -0.06
ERGIC3-219ENST00000496172 GOLGB1Q14789 3259 aaKnown RBP14.68□□□□□ -0.06
ERGIC3-219ENST00000496172 PIK3C2AO00443 1686 aa14.67□□□□□ -0.06
ERGIC3-219ENST00000496172 CDCA8Q53HL2 280 aa14.66□□□□□ -0.06
ERGIC3-219ENST00000496172 MARCH10Q8NA82 808 aaPredicted RBP14.66□□□□□ -0.06
ERGIC3-219ENST00000496172 ARXQ96QS3 562 aa14.66□□□□□ -0.06
ERGIC3-219ENST00000496172 SOX12O15370 315 aa14.65□□□□□ -0.06
ERGIC3-219ENST00000496172 WDR17Q8IZU2 1322 aa14.65□□□□□ -0.06
ERGIC3-219ENST00000496172 EDC4Q6P2E9 1401 aaKnown RBP14.64□□□□□ -0.07
ERGIC3-219ENST00000496172 MON2Q7Z3U7 1717 aa14.63□□□□□ -0.07
ERGIC3-219ENST00000496172 CD163L1Q9NR16 1453 aa14.63□□□□□ -0.07
ERGIC3-219ENST00000496172 ABCC6O95255 1503 aa14.63□□□□□ -0.07
ERGIC3-219ENST00000496172 NME9Q86XW9 330 aa14.63□□□□□ -0.07
ERGIC3-219ENST00000496172 TNS2Q63HR2 1409 aa14.63□□□□□ -0.07
ERGIC3-219ENST00000496172 A0A1W2PP64 1363 aa14.62□□□□□ -0.07
ERGIC3-219ENST00000496172 USP31Q70CQ4 1352 aa14.62□□□□□ -0.07
ERGIC3-219ENST00000496172 ARHGEF25Q86VW2 580 aa14.62□□□□□ -0.07
ERGIC3-219ENST00000496172 TOM1L2Q6ZVM7 507 aa14.61□□□□□ -0.07
ERGIC3-219ENST00000496172 RGPD5Q99666 1765 aa14.6□□□□□ -0.07
ERGIC3-219ENST00000496172 BTAF1O14981 1849 aa14.6□□□□□ -0.07
ERGIC3-219ENST00000496172 CSB-PGBD3P0DP91 1061 aa14.6□□□□□ -0.07
ERGIC3-219ENST00000496172 GPR162Q16538 588 aa14.59□□□□□ -0.07
ERGIC3-219ENST00000496172 CARD10Q9BWT7 1032 aa14.59□□□□□ -0.07
ERGIC3-219ENST00000496172 AXIN2Q9Y2T1 843 aa14.59□□□□□ -0.07
ERGIC3-219ENST00000496172 ANKRD36BQ8N2N9 1353 aa14.59□□□□□ -0.07
ERGIC3-219ENST00000496172 SLC16A10Q8TF71 515 aa14.58□□□□□ -0.08
ERGIC3-219ENST00000496172 COG3Q96JB2 828 aa14.58□□□□□ -0.08
ERGIC3-219ENST00000496172 CCDC7Q96M83 1385 aa14.58□□□□□ -0.08
ERGIC3-219ENST00000496172 NFAT5O94916 1531 aa14.57□□□□□ -0.08
ERGIC3-219ENST00000496172 TUBGCP6Q96RT7 1819 aa14.57□□□□□ -0.08
ERGIC3-219ENST00000496172 EIF4G2P78344 907 aaKnown RBP eCLIP14.55□□□□□ -0.08
ERGIC3-219ENST00000496172 USP54Q70EL1 1684 aa14.55□□□□□ -0.08
ERGIC3-219ENST00000496172 EXOC5O00471 708 aa14.54□□□□□ -0.08
ERGIC3-219ENST00000496172 ZNF827Q17R98 1081 aa14.54□□□□□ -0.08
ERGIC3-219ENST00000496172 ATP10DQ9P241 1426 aa14.52□□□□□ -0.08
ERGIC3-219ENST00000496172 GRIN3BO60391 1043 aa14.52□□□□□ -0.09
ERGIC3-219ENST00000496172 POLD1P28340 1107 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms