RNA–Protein interactions for RNA: ENST00000496120.6

PBX1-210, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-210ENST00000496120 SSH2Q76I76 1423 aa29.02■■■□□ 2.24
PBX1-210ENST00000496120 INSRP06213 1382 aa29.02■■■□□ 2.24
PBX1-210ENST00000496120 NGDNQ8NEJ9 315 aaKnown RBP29.01■■■□□ 2.23
PBX1-210ENST00000496120 TNNT2P45379 298 aaPredicted RBP29■■■□□ 2.23
PBX1-210ENST00000496120 BTG4Q9NY30 223 aa28.99■■■□□ 2.23
PBX1-210ENST00000496120 TTC21BQ7Z4L5 1316 aa28.99■■■□□ 2.23
PBX1-210ENST00000496120 KRT27Q7Z3Y8 459 aa28.98■■■□□ 2.23
PBX1-210ENST00000496120 NME9Q86XW9 330 aa28.98■■■□□ 2.23
PBX1-210ENST00000496120 MAP2P11137 1827 aaKnown RBP28.97■■■□□ 2.23
PBX1-210ENST00000496120 PAK3O75914 559 aaPredicted RBP28.94■■■□□ 2.22
PBX1-210ENST00000496120 DEFB132Q7Z7B7 95 aa28.94■■■□□ 2.22
PBX1-210ENST00000496120 PHRF1Q9P1Y6 1649 aaKnown RBP28.94■■■□□ 2.22
PBX1-210ENST00000496120 TTC21AQ8NDW8 1320 aa28.94■■■□□ 2.22
PBX1-210ENST00000496120 USP54Q70EL1 1684 aa28.94■■■□□ 2.22
PBX1-210ENST00000496120 PIK3C2AO00443 1686 aa28.93■■■□□ 2.22
PBX1-210ENST00000496120 MTHFSP49914 203 aa28.93■■■□□ 2.22
PBX1-210ENST00000496120 FAM98CQ17RN3 349 aaKnown RBP28.93■■■□□ 2.22
PBX1-210ENST00000496120 OVOS2A0A0J9YW53 1432 aa28.92■■■□□ 2.22
PBX1-210ENST00000496120 OVOS2Q6IE36 1432 aa28.92■■■□□ 2.22
PBX1-210ENST00000496120 SF3B2Q13435 895 aaKnown RBP28.91■■■□□ 2.22
PBX1-210ENST00000496120 SPATA31A5Q5VU36 1347 aa28.91■■■□□ 2.22
PBX1-210ENST00000496120 ZBED9Q6R2W3 1325 aa28.91■■■□□ 2.22
PBX1-210ENST00000496120 SPATA31A7Q8IWB4 1347 aa28.91■■■□□ 2.22
PBX1-210ENST00000496120 THSD7AQ9UPZ6 1657 aa28.91■■■□□ 2.22
PBX1-210ENST00000496120 WDR43Q15061 677 aaKnown RBP eCLIP28.9■■■□□ 2.22
PBX1-210ENST00000496120 A0A0G2JS52 829 aa28.89■■■□□ 2.22
PBX1-210ENST00000496120 MYT1Q01538 1121 aa28.89■■■□□ 2.22
PBX1-210ENST00000496120 COG3Q96JB2 828 aa28.89■■■□□ 2.22
PBX1-210ENST00000496120 COL3A1P02461 1466 aaPredicted RBP28.89■■■□□ 2.21
PBX1-210ENST00000496120 PRDM11Q9NQV5 511 aa28.89■■■□□ 2.21
PBX1-210ENST00000496120 AATKQ6ZMQ8 1374 aa28.88■■■□□ 2.21
PBX1-210ENST00000496120 CFAP53Q96M91 514 aa28.88■■■□□ 2.21
PBX1-210ENST00000496120 ADAMTS8Q9UP79 889 aa28.88■■■□□ 2.21
PBX1-210ENST00000496120 SMG6Q86US8 1419 aaKnown RBP28.87■■■□□ 2.21
PBX1-210ENST00000496120 KIAA0232Q92628 1395 aa28.86■■■□□ 2.21
PBX1-210ENST00000496120 USP31Q70CQ4 1352 aa28.86■■■□□ 2.21
PBX1-210ENST00000496120 RGPD1P0DJD0 1748 aa28.83■■■□□ 2.21
PBX1-210ENST00000496120 POLKQ9UBT6 870 aa28.81■■■□□ 2.2
PBX1-210ENST00000496120 CHRNA2Q15822 529 aa28.8■■■□□ 2.2
PBX1-210ENST00000496120 NUTM2GQ5VZR2 741 aa28.8■■■□□ 2.2
PBX1-210ENST00000496120 SPATA31A1Q5TZJ5 1347 aa28.8■■■□□ 2.2
PBX1-210ENST00000496120 BAG6P46379 1132 aa28.79■■■□□ 2.2
PBX1-210ENST00000496120 ZC3H6P61129 1189 aaKnown RBP28.78■■■□□ 2.2
PBX1-210ENST00000496120 TNS1Q9HBL0 1735 aaKnown RBP28.77■■■□□ 2.2
PBX1-210ENST00000496120 FBLN1P23142 703 aa28.77■■■□□ 2.2
PBX1-210ENST00000496120 FAM182BQ5T319 152 aa28.77■■■□□ 2.2
PBX1-210ENST00000496120 USP19O94966 1318 aa28.75■■■□□ 2.19
PBX1-210ENST00000496120 LMO7Q8WWI1 1683 aa28.75■■■□□ 2.19
PBX1-210ENST00000496120 STRN4Q9NRL3 753 aa28.74■■■□□ 2.19
PBX1-210ENST00000496120 ABTB2Q8N961 1025 aa28.74■■■□□ 2.19
PBX1-210ENST00000496120 EMILIN1Q9Y6C2 1016 aa28.74■■■□□ 2.19
PBX1-210ENST00000496120 PEAK1Q9H792 1746 aa28.74■■■□□ 2.19
PBX1-210ENST00000496120 CAMTA1Q9Y6Y1 1673 aa28.73■■■□□ 2.19
PBX1-210ENST00000496120 LRP5O75197 1615 aa28.73■■■□□ 2.19
PBX1-210ENST00000496120 CPDO75976 1380 aa28.73■■■□□ 2.19
PBX1-210ENST00000496120 DISP2A7MBM2 1401 aa28.73■■■□□ 2.19
PBX1-210ENST00000496120 NLRP6P59044 892 aa28.7■■■□□ 2.19
PBX1-210ENST00000496120 SENP3-EIF4A1A0A087X0R7 540 aa28.69■■■□□ 2.18
PBX1-210ENST00000496120 DIAPH1O60610 1272 aaKnown RBP28.69■■■□□ 2.18
PBX1-210ENST00000496120 EN1Q05925 392 aaPredicted RBP28.69■■■□□ 2.18
PBX1-210ENST00000496120 RRS1Q15050 365 aaKnown RBP28.69■■■□□ 2.18
PBX1-210ENST00000496120 NUDCQ9Y266 331 aa28.69■■■□□ 2.18
PBX1-210ENST00000496120 PPM1GO15355 546 aaPredicted RBP28.67■■■□□ 2.18
PBX1-210ENST00000496120 BARGINQ6ZT62 677 aa28.67■■■□□ 2.18
PBX1-210ENST00000496120 CCDC146Q8IYE0 955 aa28.67■■■□□ 2.18
PBX1-210ENST00000496120 PSDA5PKW4 1024 aaPredicted RBP28.65■■■□□ 2.18
PBX1-210ENST00000496120 EVA1CP58658 441 aa28.65■■■□□ 2.18
PBX1-210ENST00000496120 LTN1O94822 1766 aa28.65■■■□□ 2.18
PBX1-210ENST00000496120 GCP02774 474 aa28.64■■■□□ 2.18
PBX1-210ENST00000496120 LARP1Q6PKG0 1096 aaKnown RBP28.64■■■□□ 2.18
PBX1-210ENST00000496120 USP35Q9P2H5 1018 aa28.64■■■□□ 2.18
PBX1-210ENST00000496120 U2AF1L5P0DN76 240 aaPredicted RBP28.64■■■□□ 2.17
PBX1-210ENST00000496120 U2AF1Q01081 240 aaKnown RBP eCLIP28.64■■■□□ 2.17
PBX1-210ENST00000496120 FAM196AQ6ZSG2 479 aa28.64■■■□□ 2.17
PBX1-210ENST00000496120 NFAT5O94916 1531 aa28.63■■■□□ 2.17
PBX1-210ENST00000496120 RUNDC1Q96C34 613 aa28.63■■■□□ 2.17
PBX1-210ENST00000496120 SLIT3O75094 1523 aa28.62■■■□□ 2.17
PBX1-210ENST00000496120 COL5A2P05997 1499 aaPredicted RBP28.61■■■□□ 2.17
PBX1-210ENST00000496120 U2SURPO15042 1029 aaKnown RBP28.61■■■□□ 2.17
PBX1-210ENST00000496120 MAP3K19Q56UN5 1328 aa28.61■■■□□ 2.17
PBX1-210ENST00000496120 TRIM37O94972 964 aa28.6■■■□□ 2.17
PBX1-210ENST00000496120 IL13P35225 146 aa28.6■■■□□ 2.17
PBX1-210ENST00000496120 TCP11L2Q8N4U5 519 aa28.6■■■□□ 2.17
PBX1-210ENST00000496120 SALL2Q9Y467 1007 aaPredicted RBP28.59■■■□□ 2.17
PBX1-210ENST00000496120 PARP4Q9UKK3 1724 aaKnown RBP28.59■■■□□ 2.17
PBX1-210ENST00000496120 APAF1O14727 1248 aa28.59■■■□□ 2.17
PBX1-210ENST00000496120 SOX12O15370 315 aa28.59■■■□□ 2.17
PBX1-210ENST00000496120 PDE3BQ13370 1112 aa28.59■■■□□ 2.17
PBX1-210ENST00000496120 EZH2Q15910 746 aaKnown RBP28.59■■■□□ 2.17
PBX1-210ENST00000496120 NGEFQ8N5V2 710 aa28.59■■■□□ 2.17
PBX1-210ENST00000496120 KIF24Q5T7B8 1368 aa28.58■■■□□ 2.17
PBX1-210ENST00000496120 CAMKK2Q96RR4 588 aa28.58■■■□□ 2.17
PBX1-210ENST00000496120 FLT4P35916 1363 aa28.58■■■□□ 2.17
PBX1-210ENST00000496120 THRAP3Q9Y2W1 955 aaKnown RBP28.57■■■□□ 2.16
PBX1-210ENST00000496120 ZNF521Q96K83 1311 aa28.56■■■□□ 2.16
PBX1-210ENST00000496120 COL18A1P39060 1754 aa28.55■■■□□ 2.16
PBX1-210ENST00000496120 RREB1Q92766 1687 aa28.55■■■□□ 2.16
PBX1-210ENST00000496120 CRB1P82279 1406 aa28.54■■■□□ 2.16
PBX1-210ENST00000496120 R3HDM1Q15032 1099 aaKnown RBP28.53■■■□□ 2.16
PBX1-210ENST00000496120 PLEKHF1Q96S99 279 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms