RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ZRANB1Q9UGI0 708 aa34■■■■□ 3.03
HLA-C-209ENST00000495835 FAM196AQ6ZSG2 479 aa33.99■■■■□ 3.03
HLA-C-209ENST00000495835 AXIN2Q9Y2T1 843 aa33.98■■■■□ 3.03
HLA-C-209ENST00000495835 RGPD1P0DJD0 1748 aa33.98■■■■□ 3.03
HLA-C-209ENST00000495835 WDR17Q8IZU2 1322 aa33.98■■■■□ 3.03
HLA-C-209ENST00000495835 PDE3BQ13370 1112 aa33.97■■■■□ 3.03
HLA-C-209ENST00000495835 CDCA8Q53HL2 280 aa33.97■■■■□ 3.03
HLA-C-209ENST00000495835 BAG6P46379 1132 aa33.96■■■■□ 3.03
HLA-C-209ENST00000495835 NME9Q86XW9 330 aa33.96■■■■□ 3.03
HLA-C-209ENST00000495835 PARP4Q9UKK3 1724 aaKnown RBP33.96■■■■□ 3.03
HLA-C-209ENST00000495835 C11orf95C9JLR9 678 aaPredicted RBP33.94■■■■□ 3.02
HLA-C-209ENST00000495835 TOM1L2Q6ZVM7 507 aa33.94■■■■□ 3.02
HLA-C-209ENST00000495835 DEFB132Q7Z7B7 95 aa33.94■■■■□ 3.02
HLA-C-209ENST00000495835 SOX12O15370 315 aa33.93■■■■□ 3.02
HLA-C-209ENST00000495835 FAM182BQ5T319 152 aa33.93■■■■□ 3.02
HLA-C-209ENST00000495835 RGPD5Q99666 1765 aa33.92■■■■□ 3.02
HLA-C-209ENST00000495835 ANKRD36BQ8N2N9 1353 aa33.91■■■■□ 3.02
HLA-C-209ENST00000495835 CDCA7Q9BWT1 371 aaPredicted RBP33.91■■■■□ 3.02
HLA-C-209ENST00000495835 OVOS2A0A0J9YW53 1432 aa33.89■■■■□ 3.02
HLA-C-209ENST00000495835 DISP2A7MBM2 1401 aa33.89■■■■□ 3.02
HLA-C-209ENST00000495835 OVOS2Q6IE36 1432 aa33.89■■■■□ 3.02
HLA-C-209ENST00000495835 CARD10Q9BWT7 1032 aa33.89■■■■□ 3.02
HLA-C-209ENST00000495835 CCER1Q8TC90 406 aaPredicted RBP33.88■■■■□ 3.01
HLA-C-209ENST00000495835 LTN1O94822 1766 aa33.85■■■■□ 3.01
HLA-C-209ENST00000495835 CSB-PGBD3P0DP91 1061 aa33.85■■■■□ 3.01
HLA-C-209ENST00000495835 TNS1Q9HBL0 1735 aaKnown RBP33.84■■■■□ 3.01
HLA-C-209ENST00000495835 WNK3Q9BYP7 1800 aa33.83■■■■□ 3.01
HLA-C-209ENST00000495835 CCDC7Q96M83 1385 aa33.83■■■■□ 3.01
HLA-C-209ENST00000495835 DDB1Q16531 1140 aa33.82■■■■□ 3
HLA-C-209ENST00000495835 COG3Q96JB2 828 aa33.82■■■■□ 3
HLA-C-209ENST00000495835 TRIM37O94972 964 aa33.81■■■■□ 3
HLA-C-209ENST00000495835 ERBB3P21860 1342 aa33.79■■■■□ 3
HLA-C-209ENST00000495835 LRRC37A3O60309 1634 aa33.79■■■■□ 3
HLA-C-209ENST00000495835 EN1Q05925 392 aaPredicted RBP33.78■■■■□ 3
HLA-C-209ENST00000495835 OVOS2A0A0G2JMS6 1433 aa33.77■■■■□ 3
HLA-C-209ENST00000495835 PARD3Q8TEW0 1356 aa33.76■■■■□ 3
HLA-C-209ENST00000495835 IP6K1Q92551 441 aa33.75■■■□□ 2.99
HLA-C-209ENST00000495835 SRCAPQ6ZRS2 3230 aa33.75■■■□□ 2.99
HLA-C-209ENST00000495835 PEAK1Q9H792 1746 aa33.74■■■□□ 2.99
HLA-C-209ENST00000495835 APBA3O96018 575 aa33.73■■■□□ 2.99
HLA-C-209ENST00000495835 BCL9O00512 1426 aa33.72■■■□□ 2.99
HLA-C-209ENST00000495835 FYB1O15117 783 aa33.72■■■□□ 2.99
HLA-C-209ENST00000495835 CAMKK2Q96RR4 588 aa33.72■■■□□ 2.99
HLA-C-209ENST00000495835 EXOC5O00471 708 aa33.71■■■□□ 2.99
HLA-C-209ENST00000495835 ANKRD24Q8TF21 1146 aa33.71■■■□□ 2.99
HLA-C-209ENST00000495835 EIF4G2P78344 907 aaKnown RBP eCLIP33.69■■■□□ 2.98
HLA-C-209ENST00000495835 NLRP2Q9NX02 1062 aa33.69■■■□□ 2.98
HLA-C-209ENST00000495835 MYOM1P52179 1685 aa33.68■■■□□ 2.98
HLA-C-209ENST00000495835 EZH2Q15910 746 aaKnown RBP33.68■■■□□ 2.98
HLA-C-209ENST00000495835 FAM208AQ9UK61 1670 aaKnown RBP33.68■■■□□ 2.98
HLA-C-209ENST00000495835 SBF2Q86WG5 1849 aa33.67■■■□□ 2.98
HLA-C-209ENST00000495835 MARCH10Q8NA82 808 aaPredicted RBP33.66■■■□□ 2.98
HLA-C-209ENST00000495835 MAP3K19Q56UN5 1328 aa33.65■■■□□ 2.98
HLA-C-209ENST00000495835 KIF20BQ96Q89 1820 aa33.64■■■□□ 2.98
HLA-C-209ENST00000495835 TNS2Q63HR2 1409 aa33.63■■■□□ 2.97
HLA-C-209ENST00000495835 RTL1A6NKG5 1358 aa33.63■■■□□ 2.97
HLA-C-209ENST00000495835 IL2RBP14784 551 aa33.63■■■□□ 2.97
HLA-C-209ENST00000495835 AMPHP49418 695 aa33.63■■■□□ 2.97
HLA-C-209ENST00000495835 GGNBP2Q9H3C7 697 aa33.63■■■□□ 2.97
HLA-C-209ENST00000495835 HOXC9P31274 260 aa33.62■■■□□ 2.97
HLA-C-209ENST00000495835 BCL11BQ9C0K0 894 aaPredicted RBP33.62■■■□□ 2.97
HLA-C-209ENST00000495835 PLSCR1O15162 318 aa33.6■■■□□ 2.97
HLA-C-209ENST00000495835 CARD14Q9BXL6 1004 aa33.6■■■□□ 2.97
HLA-C-209ENST00000495835 RREB1Q92766 1687 aa33.6■■■□□ 2.97
HLA-C-209ENST00000495835 RGPD3A6NKT7 1758 aaPredicted RBP33.59■■■□□ 2.97
HLA-C-209ENST00000495835 RGPD4Q7Z3J3 1758 aa33.59■■■□□ 2.97
HLA-C-209ENST00000495835 HSPA5P11021 654 aaKnown RBP33.58■■■□□ 2.97
HLA-C-209ENST00000495835 KIF24Q5T7B8 1368 aa33.58■■■□□ 2.97
HLA-C-209ENST00000495835 NSD3Q9BZ95 1437 aa33.56■■■□□ 2.96
HLA-C-209ENST00000495835 FBLN1P23142 703 aa33.55■■■□□ 2.96
HLA-C-209ENST00000495835 PSDA5PKW4 1024 aaPredicted RBP33.52■■■□□ 2.96
HLA-C-209ENST00000495835 RRS1Q15050 365 aaKnown RBP33.52■■■□□ 2.96
HLA-C-209ENST00000495835 NBPF14Q5TI25 921 aa33.52■■■□□ 2.96
HLA-C-209ENST00000495835 LTV1Q96GA3 475 aaPredicted RBP33.52■■■□□ 2.96
HLA-C-209ENST00000495835 CGNL1Q0VF96 1302 aa33.52■■■□□ 2.96
HLA-C-209ENST00000495835 NUP188Q5SRE5 1749 aa33.51■■■□□ 2.96
HLA-C-209ENST00000495835 R3HDM1Q15032 1099 aaKnown RBP33.5■■■□□ 2.95
HLA-C-209ENST00000495835 LRP5O75197 1615 aa33.49■■■□□ 2.95
HLA-C-209ENST00000495835 SMG6Q86US8 1419 aaKnown RBP33.48■■■□□ 2.95
HLA-C-209ENST00000495835 INSRP06213 1382 aa33.47■■■□□ 2.95
HLA-C-209ENST00000495835 FLT4P35916 1363 aa33.47■■■□□ 2.95
HLA-C-209ENST00000495835 POLR3GLQ9BT43 218 aa33.44■■■□□ 2.94
HLA-C-209ENST00000495835 NHSQ6T4R5 1651 aa33.44■■■□□ 2.94
HLA-C-209ENST00000495835 RGPD2P0DJD1 1756 aa33.44■■■□□ 2.94
HLA-C-209ENST00000495835 PTF1AQ7RTS3 328 aa33.43■■■□□ 2.94
HLA-C-209ENST00000495835 HSP90AB2PQ58FF8 381 aa33.41■■■□□ 2.94
HLA-C-209ENST00000495835 NBPF6Q5VWK0 638 aa33.4■■■□□ 2.94
HLA-C-209ENST00000495835 NBPF4Q96M43 638 aa33.4■■■□□ 2.94
HLA-C-209ENST00000495835 ANKRD26Q9UPS8 1709 aa33.38■■■□□ 2.93
HLA-C-209ENST00000495835 KCNQ2O43526 872 aa33.37■■■□□ 2.93
HLA-C-209ENST00000495835 ZCRB1Q8TBF4 217 aaKnown RBP33.37■■■□□ 2.93
HLA-C-209ENST00000495835 MAP2P11137 1827 aaKnown RBP33.37■■■□□ 2.93
HLA-C-209ENST00000495835 PROM2Q8N271 834 aa33.36■■■□□ 2.93
HLA-C-209ENST00000495835 PANK3Q9H999 370 aa33.36■■■□□ 2.93
HLA-C-209ENST00000495835 DDX54Q8TDD1 881 aaKnown RBP33.35■■■□□ 2.93
HLA-C-209ENST00000495835 EMILIN1Q9Y6C2 1016 aa33.35■■■□□ 2.93
HLA-C-209ENST00000495835 WASHC2AQ641Q2 1341 aa33.34■■■□□ 2.93
HLA-C-209ENST00000495835 RAPGEF4Q8WZA2 1011 aa33.34■■■□□ 2.93
HLA-C-209ENST00000495835 ACSBG1Q96GR2 724 aa33.34■■■□□ 2.93
HLA-C-209ENST00000495835 NSD2O96028 1365 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms