RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 GJD4Q96KN9 370 aaPredicted RBP27.46■■□□□ 1.99
LMO4-204ENST00000495705 GLI3P10071 1580 aa27.45■■□□□ 1.99
LMO4-204ENST00000495705 PER1O15534 1290 aaPredicted RBP27.44■■□□□ 1.98
LMO4-204ENST00000495705 EVA1CP58658 441 aa27.44■■□□□ 1.98
LMO4-204ENST00000495705 STRN4Q9NRL3 753 aa27.44■■□□□ 1.98
LMO4-204ENST00000495705 CCDC9Q9Y3X0 531 aaKnown RBP27.44■■□□□ 1.98
LMO4-204ENST00000495705 ILDR2Q71H61 639 aa27.43■■□□□ 1.98
LMO4-204ENST00000495705 AMER1Q5JTC6 1135 aaPredicted RBP27.42■■□□□ 1.98
LMO4-204ENST00000495705 RTL1A6NKG5 1358 aa27.42■■□□□ 1.98
LMO4-204ENST00000495705 MAP3K19Q56UN5 1328 aa27.41■■□□□ 1.98
LMO4-204ENST00000495705 BLMP54132 1417 aaPredicted RBP27.41■■□□□ 1.98
LMO4-204ENST00000495705 AXIN2Q9Y2T1 843 aa27.41■■□□□ 1.98
LMO4-204ENST00000495705 SPATA31A5Q5VU36 1347 aa27.4■■□□□ 1.98
LMO4-204ENST00000495705 SPATA31A7Q8IWB4 1347 aa27.4■■□□□ 1.98
LMO4-204ENST00000495705 KIF24Q5T7B8 1368 aa27.39■■□□□ 1.98
LMO4-204ENST00000495705 NPC1L1Q9UHC9 1359 aa27.39■■□□□ 1.98
LMO4-204ENST00000495705 MAP2P11137 1827 aaKnown RBP27.39■■□□□ 1.97
LMO4-204ENST00000495705 FBLN1P23142 703 aa27.38■■□□□ 1.97
LMO4-204ENST00000495705 AMPHP49418 695 aa27.38■■□□□ 1.97
LMO4-204ENST00000495705 IP6K1Q92551 441 aa27.38■■□□□ 1.97
LMO4-204ENST00000495705 RGS12O14924 1447 aa27.38■■□□□ 1.97
LMO4-204ENST00000495705 CRB1P82279 1406 aa27.38■■□□□ 1.97
LMO4-204ENST00000495705 WDR17Q8IZU2 1322 aa27.38■■□□□ 1.97
LMO4-204ENST00000495705 RRS1Q15050 365 aaKnown RBP27.37■■□□□ 1.97
LMO4-204ENST00000495705 LARP1Q6PKG0 1096 aaKnown RBP27.37■■□□□ 1.97
LMO4-204ENST00000495705 MORC1Q86VD1 984 aa27.37■■□□□ 1.97
LMO4-204ENST00000495705 SPATA31A1Q5TZJ5 1347 aa27.37■■□□□ 1.97
LMO4-204ENST00000495705 FAM208AQ9UK61 1670 aaKnown RBP27.36■■□□□ 1.97
LMO4-204ENST00000495705 ERBB3P21860 1342 aa27.36■■□□□ 1.97
LMO4-204ENST00000495705 HOXC9P31274 260 aa27.35■■□□□ 1.97
LMO4-204ENST00000495705 FLT4P35916 1363 aa27.35■■□□□ 1.97
LMO4-204ENST00000495705 PEAK1Q9H792 1746 aa27.34■■□□□ 1.97
LMO4-204ENST00000495705 CSB-PGBD3P0DP91 1061 aa27.33■■□□□ 1.97
LMO4-204ENST00000495705 TOM1L2Q6ZVM7 507 aa27.32■■□□□ 1.96
LMO4-204ENST00000495705 TNNT2P45379 298 aaPredicted RBP27.31■■□□□ 1.96
LMO4-204ENST00000495705 ANKRD24Q8TF21 1146 aa27.31■■□□□ 1.96
LMO4-204ENST00000495705 THRAP3Q9Y2W1 955 aaKnown RBP27.31■■□□□ 1.96
LMO4-204ENST00000495705 ONECUT3O60422 494 aaPredicted RBP27.3■■□□□ 1.96
LMO4-204ENST00000495705 TCP11L2Q8N4U5 519 aa27.3■■□□□ 1.96
LMO4-204ENST00000495705 EMILIN1Q9Y6C2 1016 aa27.3■■□□□ 1.96
LMO4-204ENST00000495705 THSD7AQ9UPZ6 1657 aa27.3■■□□□ 1.96
LMO4-204ENST00000495705 FAM98CQ17RN3 349 aaKnown RBP27.29■■□□□ 1.96
LMO4-204ENST00000495705 CC2D1BQ5T0F9 858 aaKnown RBP27.29■■□□□ 1.96
LMO4-204ENST00000495705 USP35Q9P2H5 1018 aa27.29■■□□□ 1.96
LMO4-204ENST00000495705 POLKQ9UBT6 870 aa27.29■■□□□ 1.96
LMO4-204ENST00000495705 INSRP06213 1382 aa27.29■■□□□ 1.96
LMO4-204ENST00000495705 SMG6Q86US8 1419 aaKnown RBP27.29■■□□□ 1.96
LMO4-204ENST00000495705 WNK3Q9BYP7 1800 aa27.28■■□□□ 1.96
LMO4-204ENST00000495705 BARGINQ6ZT62 677 aa27.28■■□□□ 1.96
LMO4-204ENST00000495705 CARD10Q9BWT7 1032 aa27.28■■□□□ 1.96
LMO4-204ENST00000495705 PPM1GO15355 546 aaPredicted RBP27.25■■□□□ 1.95
LMO4-204ENST00000495705 SEPT12Q8IYM1 358 aa27.25■■□□□ 1.95
LMO4-204ENST00000495705 BRWD3Q6RI45 1802 aa27.25■■□□□ 1.95
LMO4-204ENST00000495705 A0A0G2JS52 829 aa27.24■■□□□ 1.95
LMO4-204ENST00000495705 ZNF316A6NFI3 1004 aaPredicted RBP27.24■■□□□ 1.95
LMO4-204ENST00000495705 MYT1Q01538 1121 aa27.24■■□□□ 1.95
LMO4-204ENST00000495705 DDX10Q13206 875 aaKnown RBP27.24■■□□□ 1.95
LMO4-204ENST00000495705 HSP90AB2PQ58FF8 381 aa27.24■■□□□ 1.95
LMO4-204ENST00000495705 LTV1Q96GA3 475 aaPredicted RBP27.24■■□□□ 1.95
LMO4-204ENST00000495705 NLRP2Q9NX02 1062 aa27.24■■□□□ 1.95
LMO4-204ENST00000495705 PARP4Q9UKK3 1724 aaKnown RBP27.23■■□□□ 1.95
LMO4-204ENST00000495705 RGPD2P0DJD1 1756 aa27.21■■□□□ 1.95
LMO4-204ENST00000495705 CNGB1Q14028 1251 aaPredicted RBP27.19■■□□□ 1.94
LMO4-204ENST00000495705 CDCA7Q9BWT1 371 aaPredicted RBP27.19■■□□□ 1.94
LMO4-204ENST00000495705 DISP2A7MBM2 1401 aa27.17■■□□□ 1.94
LMO4-204ENST00000495705 LRRC37A3O60309 1634 aa27.16■■□□□ 1.94
LMO4-204ENST00000495705 KRT27Q7Z3Y8 459 aa27.14■■□□□ 1.94
LMO4-204ENST00000495705 SOCS7O14512 581 aa27.12■■□□□ 1.93
LMO4-204ENST00000495705 MTHFSP49914 203 aa27.12■■□□□ 1.93
LMO4-204ENST00000495705 NBPF6Q5VWK0 638 aa27.12■■□□□ 1.93
LMO4-204ENST00000495705 NBPF4Q96M43 638 aa27.12■■□□□ 1.93
LMO4-204ENST00000495705 PARD3Q8TEW0 1356 aa27.11■■□□□ 1.93
LMO4-204ENST00000495705 IL2RBP14784 551 aa27.11■■□□□ 1.93
LMO4-204ENST00000495705 EIF4A2Q14240 407 aaKnown RBP27.11■■□□□ 1.93
LMO4-204ENST00000495705 NCAPD2Q15021 1401 aa27.1■■□□□ 1.93
LMO4-204ENST00000495705 DDB1Q16531 1140 aa27.1■■□□□ 1.93
LMO4-204ENST00000495705 PDE3BQ13370 1112 aa27.09■■□□□ 1.93
LMO4-204ENST00000495705 TNS2Q63HR2 1409 aa27.08■■□□□ 1.93
LMO4-204ENST00000495705 USHBP1Q8N6Y0 703 aa27.06■■□□□ 1.92
LMO4-204ENST00000495705 EYA1Q99502 592 aa27.06■■□□□ 1.92
LMO4-204ENST00000495705 EXOC5O00471 708 aa27.05■■□□□ 1.92
LMO4-204ENST00000495705 PPP2R1AP30153 589 aa27.05■■□□□ 1.92
LMO4-204ENST00000495705 RALBP1Q15311 655 aa27.04■■□□□ 1.92
LMO4-204ENST00000495705 RAPGEF4Q8WZA2 1011 aa27.04■■□□□ 1.92
LMO4-204ENST00000495705 IGSF1Q8N6C5 1336 aa27.04■■□□□ 1.92
LMO4-204ENST00000495705 MEGF6O75095 1541 aa27.04■■□□□ 1.92
LMO4-204ENST00000495705 RGPD1P0DJD0 1748 aa27.04■■□□□ 1.92
LMO4-204ENST00000495705 OVOS2A0A0G2JMS6 1433 aa27.03■■□□□ 1.92
LMO4-204ENST00000495705 COL3A1P02461 1466 aaPredicted RBP27.03■■□□□ 1.92
LMO4-204ENST00000495705 CFAP53Q96M91 514 aa27.02■■□□□ 1.92
LMO4-204ENST00000495705 IL13P35225 146 aa27.01■■□□□ 1.91
LMO4-204ENST00000495705 EP400Q96L91 3159 aa27■■□□□ 1.91
LMO4-204ENST00000495705 DIAPH1O60610 1272 aaKnown RBP27■■□□□ 1.91
LMO4-204ENST00000495705 TATP17735 454 aaPredicted RBP27■■□□□ 1.91
LMO4-204ENST00000495705 PLEKHG2Q9H7P9 1386 aa26.99■■□□□ 1.91
LMO4-204ENST00000495705 FAM196AQ6ZSG2 479 aa26.98■■□□□ 1.91
LMO4-204ENST00000495705 UPF1Q92900 1129 aaKnown RBP eCLIP26.98■■□□□ 1.91
LMO4-204ENST00000495705 PKD1L3Q7Z443 1732 aa26.98■■□□□ 1.91
LMO4-204ENST00000495705 SHANK3Q9BYB0 1731 aa26.98■■□□□ 1.91
LMO4-204ENST00000495705 FAM182BQ5T319 152 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms