RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 MARCH10Q8NA82 808 aaPredicted RBP25.23■■□□□ 1.63
TMEM53-209ENST00000495630 TTC21BQ7Z4L5 1316 aa25.22■■□□□ 1.63
TMEM53-209ENST00000495630 CARD10Q9BWT7 1032 aa25.22■■□□□ 1.63
TMEM53-209ENST00000495630 BCL9O00512 1426 aa25.21■■□□□ 1.63
TMEM53-209ENST00000495630 PTF1AQ7RTS3 328 aa25.21■■□□□ 1.63
TMEM53-209ENST00000495630 PROM2Q8N271 834 aa25.21■■□□□ 1.63
TMEM53-209ENST00000495630 NINLQ9Y2I6 1382 aa25.2■■□□□ 1.63
TMEM53-209ENST00000495630 PEAK1Q9H792 1746 aa25.2■■□□□ 1.62
TMEM53-209ENST00000495630 TTC21AQ8NDW8 1320 aa25.19■■□□□ 1.62
TMEM53-209ENST00000495630 EXOC5O00471 708 aa25.19■■□□□ 1.62
TMEM53-209ENST00000495630 CSB-PGBD3P0DP91 1061 aa25.18■■□□□ 1.62
TMEM53-209ENST00000495630 ANO8Q9HCE9 1232 aaPredicted RBP25.18■■□□□ 1.62
TMEM53-209ENST00000495630 CPSF1Q10570 1443 aaKnown RBP25.17■■□□□ 1.62
TMEM53-209ENST00000495630 QRICH2Q9H0J4 1663 aa25.17■■□□□ 1.62
TMEM53-209ENST00000495630 COL18A1P39060 1754 aa25.16■■□□□ 1.62
TMEM53-209ENST00000495630 SOX12O15370 315 aa25.14■■□□□ 1.62
TMEM53-209ENST00000495630 LRRC37A3O60309 1634 aa25.13■■□□□ 1.61
TMEM53-209ENST00000495630 TXNRD1Q16881 649 aa25.12■■□□□ 1.61
TMEM53-209ENST00000495630 PIK3C2AO00443 1686 aa25.12■■□□□ 1.61
TMEM53-209ENST00000495630 RGPD3A6NKT7 1758 aaPredicted RBP25.12■■□□□ 1.61
TMEM53-209ENST00000495630 RGPD4Q7Z3J3 1758 aa25.12■■□□□ 1.61
TMEM53-209ENST00000495630 SBF2Q86WG5 1849 aa25.12■■□□□ 1.61
TMEM53-209ENST00000495630 ROCK2O75116 1388 aaKnown RBP25.11■■□□□ 1.61
TMEM53-209ENST00000495630 CCDC7Q96M83 1385 aa25.11■■□□□ 1.61
TMEM53-209ENST00000495630 PDGFDQ9GZP0 370 aaPredicted RBP25.11■■□□□ 1.61
TMEM53-209ENST00000495630 STK32BQ9NY57 414 aa25.11■■□□□ 1.61
TMEM53-209ENST00000495630 KTN1Q86UP2 1357 aaKnown RBP25.1■■□□□ 1.61
TMEM53-209ENST00000495630 SIN3AQ96ST3 1273 aa25.1■■□□□ 1.61
TMEM53-209ENST00000495630 ZBTB7AO95365 584 aa25.09■■□□□ 1.61
TMEM53-209ENST00000495630 SLC15A2Q16348 729 aa25.09■■□□□ 1.61
TMEM53-209ENST00000495630 PTGER2P43116 358 aa25.08■■□□□ 1.61
TMEM53-209ENST00000495630 TRPM1Q7Z4N2 1603 aa25.08■■□□□ 1.6
TMEM53-209ENST00000495630 NEUROD1Q13562 356 aa25.06■■□□□ 1.6
TMEM53-209ENST00000495630 ATF5Q9Y2D1 282 aaPredicted RBP25.06■■□□□ 1.6
TMEM53-209ENST00000495630 USP31Q70CQ4 1352 aa25.05■■□□□ 1.6
TMEM53-209ENST00000495630 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.03■■□□□ 1.6
TMEM53-209ENST00000495630 NFAT5O94916 1531 aa25.02■■□□□ 1.6
TMEM53-209ENST00000495630 MTFR1LQ9H019 292 aa25.02■■□□□ 1.6
TMEM53-209ENST00000495630 NLRP2Q9NX02 1062 aa25.02■■□□□ 1.6
TMEM53-209ENST00000495630 CASZ1Q86V15 1759 aa25.02■■□□□ 1.6
TMEM53-209ENST00000495630 ABCC6O95255 1503 aa25.02■■□□□ 1.6
TMEM53-209ENST00000495630 IL2RBP14784 551 aa25■■□□□ 1.59
TMEM53-209ENST00000495630 SYT17Q9BSW7 474 aa25■■□□□ 1.59
TMEM53-209ENST00000495630 ERBB3P21860 1342 aa25■■□□□ 1.59
TMEM53-209ENST00000495630 TNS2Q63HR2 1409 aa25■■□□□ 1.59
TMEM53-209ENST00000495630 AKAP12Q02952 1782 aa25■■□□□ 1.59
TMEM53-209ENST00000495630 NME9Q86XW9 330 aa24.99■■□□□ 1.59
TMEM53-209ENST00000495630 ACSBG1Q96GR2 724 aa24.99■■□□□ 1.59
TMEM53-209ENST00000495630 RGPD5Q99666 1765 aa24.99■■□□□ 1.59
TMEM53-209ENST00000495630 WNK3Q9BYP7 1800 aa24.99■■□□□ 1.59
TMEM53-209ENST00000495630 SBNO2Q9Y2G9 1366 aa24.99■■□□□ 1.59
TMEM53-209ENST00000495630 HDGFL2Q7Z4V5 671 aaPredicted RBP24.97■■□□□ 1.59
TMEM53-209ENST00000495630 SGIP1Q9BQI5 828 aa24.97■■□□□ 1.59
TMEM53-209ENST00000495630 FHDC1Q9C0D6 1143 aaPredicted RBP24.97■■□□□ 1.59
TMEM53-209ENST00000495630 TMC1Q8TDI8 760 aa24.96■■□□□ 1.59
TMEM53-209ENST00000495630 ANKRD24Q8TF21 1146 aa24.96■■□□□ 1.59
TMEM53-209ENST00000495630 SLC12A5Q9H2X9 1139 aa24.95■■□□□ 1.58
TMEM53-209ENST00000495630 CARD11Q9BXL7 1154 aa24.94■■□□□ 1.58
TMEM53-209ENST00000495630 PUS7Q96PZ0 661 aaKnown RBP24.93■■□□□ 1.58
TMEM53-209ENST00000495630 ARXQ96QS3 562 aa24.92■■□□□ 1.58
TMEM53-209ENST00000495630 TERF2IPQ9NYB0 399 aa24.92■■□□□ 1.58
TMEM53-209ENST00000495630 CD163L1Q9NR16 1453 aa24.91■■□□□ 1.58
TMEM53-209ENST00000495630 ZNF784Q8NCA9 323 aaPredicted RBP24.9■■□□□ 1.58
TMEM53-209ENST00000495630 IP6K1Q92551 441 aa24.89■■□□□ 1.58
TMEM53-209ENST00000495630 MYOM1P52179 1685 aa24.88■■□□□ 1.57
TMEM53-209ENST00000495630 EDC4Q6P2E9 1401 aaKnown RBP24.88■■□□□ 1.57
TMEM53-209ENST00000495630 LRRC4BQ9NT99 713 aa24.88■■□□□ 1.57
TMEM53-209ENST00000495630 MON2Q7Z3U7 1717 aa24.88■■□□□ 1.57
TMEM53-209ENST00000495630 SLC27A3Q5K4L6 730 aa24.87■■□□□ 1.57
TMEM53-209ENST00000495630 NHSQ6T4R5 1651 aa24.87■■□□□ 1.57
TMEM53-209ENST00000495630 ZNF827Q17R98 1081 aa24.86■■□□□ 1.57
TMEM53-209ENST00000495630 SLC16A10Q8TF71 515 aa24.86■■□□□ 1.57
TMEM53-209ENST00000495630 MAP3K5Q99683 1374 aa24.85■■□□□ 1.57
TMEM53-209ENST00000495630 DDX54Q8TDD1 881 aaKnown RBP24.85■■□□□ 1.57
TMEM53-209ENST00000495630 USP54Q70EL1 1684 aa24.85■■□□□ 1.57
TMEM53-209ENST00000495630 AKT1S1Q96B36 256 aa24.84■■□□□ 1.57
TMEM53-209ENST00000495630 A0A1W2PP64 1363 aa24.81■■□□□ 1.56
TMEM53-209ENST00000495630 LTV1Q96GA3 475 aaPredicted RBP24.81■■□□□ 1.56
TMEM53-209ENST00000495630 PAPPAQ13219 1627 aa24.79■■□□□ 1.56
TMEM53-209ENST00000495630 UTRNP46939 3433 aa24.79■■□□□ 1.56
TMEM53-209ENST00000495630 SLC24A1O60721 1099 aa24.79■■□□□ 1.56
TMEM53-209ENST00000495630 PRIM1P49642 420 aaKnown RBP24.79■■□□□ 1.56
TMEM53-209ENST00000495630 COG3Q96JB2 828 aa24.79■■□□□ 1.56
TMEM53-209ENST00000495630 KAT6BQ8WYB5 2073 aa24.78■■□□□ 1.56
TMEM53-209ENST00000495630 POLD1P28340 1107 aa24.78■■□□□ 1.56
TMEM53-209ENST00000495630 LTN1O94822 1766 aa24.77■■□□□ 1.56
TMEM53-209ENST00000495630 BTAF1O14981 1849 aa24.77■■□□□ 1.56
TMEM53-209ENST00000495630 GPR162Q16538 588 aa24.77■■□□□ 1.56
TMEM53-209ENST00000495630 TFCP2L1Q9NZI6 479 aa24.77■■□□□ 1.56
TMEM53-209ENST00000495630 HOXC9P31274 260 aa24.76■■□□□ 1.55
TMEM53-209ENST00000495630 AMPHP49418 695 aa24.76■■□□□ 1.55
TMEM53-209ENST00000495630 ZCRB1Q8TBF4 217 aaKnown RBP24.76■■□□□ 1.55
TMEM53-209ENST00000495630 SYTL4Q96C24 671 aaPredicted RBP24.76■■□□□ 1.55
TMEM53-209ENST00000495630 MAP3K19Q56UN5 1328 aa24.76■■□□□ 1.55
TMEM53-209ENST00000495630 PNPLA7Q6ZV29 1317 aa24.75■■□□□ 1.55
TMEM53-209ENST00000495630 TESK2Q96S53 571 aa24.74■■□□□ 1.55
TMEM53-209ENST00000495630 ANKRD36BQ8N2N9 1353 aa24.74■■□□□ 1.55
TMEM53-209ENST00000495630 TONSLQ96HA7 1378 aa24.72■■□□□ 1.55
TMEM53-209ENST00000495630 KCNQ4P56696 695 aa24.72■■□□□ 1.55
TMEM53-209ENST00000495630 ST20-MTHFSA0A0A6YYL1 179 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms