RNA–Protein interactions for RNA: ENST00000495350.5

CBX1-205, Transcript of chromobox 1, humanhuman

TSL 2 BASIC

Gene CBX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-205ENST00000495350 LRRC37A3O60309 1634 aa9.02□□□□□ -0.96
CBX1-205ENST00000495350 PELP1Q8IZL8 1130 aaKnown RBP9.02□□□□□ -0.97
CBX1-205ENST00000495350 KLHL34Q8N239 644 aa9.02□□□□□ -0.97
CBX1-205ENST00000495350 DCAF11Q8TEB1 546 aa9.02□□□□□ -0.97
CBX1-205ENST00000495350 STAC3Q96MF2 364 aa9.02□□□□□ -0.97
CBX1-205ENST00000495350 PEAK1Q9H792 1746 aa9.02□□□□□ -0.97
CBX1-205ENST00000495350 PLEKHG3A1L390 1219 aa9.01□□□□□ -0.97
CBX1-205ENST00000495350 CSB-PGBD3P0DP91 1061 aa9.01□□□□□ -0.97
CBX1-205ENST00000495350 PTF1AQ7RTS3 328 aa9.01□□□□□ -0.97
CBX1-205ENST00000495350 PROM2Q8N271 834 aa9.01□□□□□ -0.97
CBX1-205ENST00000495350 CEP350Q5VT06 3117 aa9.01□□□□□ -0.97
CBX1-205ENST00000495350 SBF2Q86WG5 1849 aa9.01□□□□□ -0.97
CBX1-205ENST00000495350 AATKQ6ZMQ8 1374 aa9□□□□□ -0.97
CBX1-205ENST00000495350 MAP3K5Q99683 1374 aa9□□□□□ -0.97
CBX1-205ENST00000495350 BCL9O00512 1426 aa9□□□□□ -0.97
CBX1-205ENST00000495350 NLRP6P59044 892 aa9□□□□□ -0.97
CBX1-205ENST00000495350 SRPK2P78362 688 aaKnown RBP9□□□□□ -0.97
CBX1-205ENST00000495350 MARCH10Q8NA82 808 aaPredicted RBP9□□□□□ -0.97
CBX1-205ENST00000495350 WDR17Q8IZU2 1322 aa9□□□□□ -0.97
CBX1-205ENST00000495350 ARHGEF28Q8N1W1 1705 aaKnown RBP9□□□□□ -0.97
CBX1-205ENST00000495350 BRD4O60885 1362 aaPredicted RBP8.99□□□□□ -0.97
CBX1-205ENST00000495350 EXOC5O00471 708 aa8.99□□□□□ -0.97
CBX1-205ENST00000495350 POLD1P28340 1107 aa8.99□□□□□ -0.97
CBX1-205ENST00000495350 TOPAZ1Q8N9V7 1692 aa8.99□□□□□ -0.97
CBX1-205ENST00000495350 AKAP12Q02952 1782 aa8.99□□□□□ -0.97
CBX1-205ENST00000495350 PPIP5K1Q6PFW1 1433 aa8.98□□□□□ -0.97
CBX1-205ENST00000495350 SGIP1Q9BQI5 828 aa8.98□□□□□ -0.97
CBX1-205ENST00000495350 CARD10Q9BWT7 1032 aa8.96□□□□□ -0.98
CBX1-205ENST00000495350 CCDC7Q96M83 1385 aa8.96□□□□□ -0.98
CBX1-205ENST00000495350 CPSF1Q10570 1443 aaKnown RBP8.96□□□□□ -0.98
CBX1-205ENST00000495350 TNS2Q63HR2 1409 aa8.96□□□□□ -0.98
CBX1-205ENST00000495350 SLIT3O75094 1523 aa8.95□□□□□ -0.98
CBX1-205ENST00000495350 SOX12O15370 315 aa8.95□□□□□ -0.98
CBX1-205ENST00000495350 GRIN3BO60391 1043 aa8.95□□□□□ -0.98
CBX1-205ENST00000495350 KCNH5Q8NCM2 988 aa8.95□□□□□ -0.98
CBX1-205ENST00000495350 SLC16A10Q8TF71 515 aa8.95□□□□□ -0.98
CBX1-205ENST00000495350 ACSBG1Q96GR2 724 aa8.95□□□□□ -0.98
CBX1-205ENST00000495350 WNK3Q9BYP7 1800 aa8.95□□□□□ -0.98
CBX1-205ENST00000495350 USP6P35125 1406 aa8.95□□□□□ -0.98
CBX1-205ENST00000495350 CABP2Q9NPB3 220 aa8.94□□□□□ -0.98
CBX1-205ENST00000495350 AXIN2Q9Y2T1 843 aa8.94□□□□□ -0.98
CBX1-205ENST00000495350 ZNF827Q17R98 1081 aa8.93□□□□□ -0.98
CBX1-205ENST00000495350 ARHGEF25Q86VW2 580 aa8.93□□□□□ -0.98
CBX1-205ENST00000495350 GPBP1L1Q9HC44 474 aaPredicted RBP8.93□□□□□ -0.98
CBX1-205ENST00000495350 CABP1Q9NZU7 370 aa8.93□□□□□ -0.98
CBX1-205ENST00000495350 CENPJQ9HC77 1338 aaPredicted RBP8.93□□□□□ -0.98
CBX1-205ENST00000495350 GOLGB1Q14789 3259 aaKnown RBP8.93□□□□□ -0.98
CBX1-205ENST00000495350 KAT6BQ8WYB5 2073 aa8.92□□□□□ -0.98
CBX1-205ENST00000495350 NHSQ6T4R5 1651 aa8.92□□□□□ -0.98
CBX1-205ENST00000495350 TFCP2L1Q9NZI6 479 aa8.92□□□□□ -0.98
CBX1-205ENST00000495350 SHANK3Q9BYB0 1731 aa8.91□□□□□ -0.98
CBX1-205ENST00000495350 PAPPAQ13219 1627 aa8.91□□□□□ -0.98
CBX1-205ENST00000495350 ABCC6O95255 1503 aa8.91□□□□□ -0.98
CBX1-205ENST00000495350 RAB3GAP2Q9H2M9 1393 aa8.91□□□□□ -0.98
CBX1-205ENST00000495350 IL2RBP14784 551 aa8.91□□□□□ -0.98
CBX1-205ENST00000495350 HSPA6P17066 643 aa8.91□□□□□ -0.98
CBX1-205ENST00000495350 SLC27A3Q5K4L6 730 aa8.91□□□□□ -0.98
CBX1-205ENST00000495350 NLGN2Q8NFZ4 835 aa8.91□□□□□ -0.98
CBX1-205ENST00000495350 NLRP2Q9NX02 1062 aa8.91□□□□□ -0.98
CBX1-205ENST00000495350 QRICH2Q9H0J4 1663 aa8.91□□□□□ -0.98
CBX1-205ENST00000495350 ATP10DQ9P241 1426 aa8.9□□□□□ -0.98
CBX1-205ENST00000495350 MSH5O43196 834 aa8.9□□□□□ -0.98
CBX1-205ENST00000495350 COL18A1P39060 1754 aa8.9□□□□□ -0.98
CBX1-205ENST00000495350 TRPM1Q7Z4N2 1603 aa8.9□□□□□ -0.99
CBX1-205ENST00000495350 PNPLA7Q6ZV29 1317 aa8.89□□□□□ -0.99
CBX1-205ENST00000495350 EVC2Q86UK5 1308 aa8.89□□□□□ -0.99
CBX1-205ENST00000495350 TTC21AQ8NDW8 1320 aa8.89□□□□□ -0.99
CBX1-205ENST00000495350 PIK3C2AO00443 1686 aa8.89□□□□□ -0.99
CBX1-205ENST00000495350 AKT1S1Q96B36 256 aa8.89□□□□□ -0.99
CBX1-205ENST00000495350 SYTL4Q96C24 671 aaPredicted RBP8.89□□□□□ -0.99
CBX1-205ENST00000495350 ZNF692Q9BU19 519 aaPredicted RBP8.89□□□□□ -0.99
CBX1-205ENST00000495350 LRRC4BQ9NT99 713 aa8.89□□□□□ -0.99
CBX1-205ENST00000495350 BTAF1O14981 1849 aa8.89□□□□□ -0.99
CBX1-205ENST00000495350 ERBB3P21860 1342 aa8.88□□□□□ -0.99
CBX1-205ENST00000495350 TTC21BQ7Z4L5 1316 aa8.88□□□□□ -0.99
CBX1-205ENST00000495350 YBX3P16989 372 aaKnown RBP eCLIP8.88□□□□□ -0.99
CBX1-205ENST00000495350 ZNF526Q8TF50 670 aaPredicted RBP8.88□□□□□ -0.99
CBX1-205ENST00000495350 KIAA1210Q9ULL0 1709 aa8.88□□□□□ -0.99
CBX1-205ENST00000495350 RGPD5Q99666 1765 aa8.87□□□□□ -0.99
CBX1-205ENST00000495350 NBPF1Q3BBV0 1214 aa8.87□□□□□ -0.99
CBX1-205ENST00000495350 DDX54Q8TDD1 881 aaKnown RBP8.86□□□□□ -0.99
CBX1-205ENST00000495350 KTN1Q86UP2 1357 aaKnown RBP8.86□□□□□ -0.99
CBX1-205ENST00000495350 QSER1Q2KHR3 1735 aa8.85□□□□□ -0.99
CBX1-205ENST00000495350 NFAT5O94916 1531 aa8.85□□□□□ -0.99
CBX1-205ENST00000495350 HMGB2P26583 209 aaKnown RBP8.85□□□□□ -0.99
CBX1-205ENST00000495350 ANKRD24Q8TF21 1146 aa8.85□□□□□ -0.99
CBX1-205ENST00000495350 CCNL1Q9UK58 526 aaPredicted RBP8.85□□□□□ -0.99
CBX1-205ENST00000495350 APLP1P51693 650 aa8.84□□□□□ -0.99
CBX1-205ENST00000495350 KCNQ4P56696 695 aa8.84□□□□□ -0.99
CBX1-205ENST00000495350 MSL1Q68DK7 614 aa8.84□□□□□ -0.99
CBX1-205ENST00000495350 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.84□□□□□ -0.99
CBX1-205ENST00000495350 CD2APQ9Y5K6 639 aa8.84□□□□□ -0.99
CBX1-205ENST00000495350 ADCY9O60503 1353 aa8.83□□□□□ -1
CBX1-205ENST00000495350 ANKRD36BQ8N2N9 1353 aa8.83□□□□□ -1
CBX1-205ENST00000495350 USP47Q96K76 1375 aa8.83□□□□□ -1
CBX1-205ENST00000495350 COL24A1Q17RW2 1714 aa8.83□□□□□ -1
CBX1-205ENST00000495350 PRIM1P49642 420 aaKnown RBP8.82□□□□□ -1
CBX1-205ENST00000495350 COL23A1Q86Y22 540 aaPredicted RBP8.82□□□□□ -1
CBX1-205ENST00000495350 FLAD1Q8NFF5 587 aa8.82□□□□□ -1
CBX1-205ENST00000495350 LTV1Q96GA3 475 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms