RNA–Protein interactions for RNA: ENST00000495341.5

LMNA-215, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-215ENST00000495341 NFAT5O94916 1531 aa23.33■■□□□ 1.33
LMNA-215ENST00000495341 ST20-MTHFSA0A0A6YYL1 179 aa23.33■■□□□ 1.33
LMNA-215ENST00000495341 PSDA5PKW4 1024 aaPredicted RBP23.33■■□□□ 1.33
LMNA-215ENST00000495341 APBA3O96018 575 aa23.33■■□□□ 1.33
LMNA-215ENST00000495341 EZH2Q15910 746 aaKnown RBP23.33■■□□□ 1.33
LMNA-215ENST00000495341 NME9Q86XW9 330 aa23.33■■□□□ 1.33
LMNA-215ENST00000495341 PARP4Q9UKK3 1724 aaKnown RBP23.33■■□□□ 1.32
LMNA-215ENST00000495341 TERF2IPQ9NYB0 399 aa23.32■■□□□ 1.32
LMNA-215ENST00000495341 EDC4Q6P2E9 1401 aaKnown RBP23.32■■□□□ 1.32
LMNA-215ENST00000495341 A0A1W2PP64 1363 aa23.3■■□□□ 1.32
LMNA-215ENST00000495341 USP31Q70CQ4 1352 aa23.3■■□□□ 1.32
LMNA-215ENST00000495341 PUS7Q96PZ0 661 aaKnown RBP23.3■■□□□ 1.32
LMNA-215ENST00000495341 TESK2Q96S53 571 aa23.3■■□□□ 1.32
LMNA-215ENST00000495341 DDB1Q16531 1140 aa23.29■■□□□ 1.32
LMNA-215ENST00000495341 OVOS2A0A0G2JMS6 1433 aa23.28■■□□□ 1.32
LMNA-215ENST00000495341 OVOS2A0A0J9YW53 1432 aa23.28■■□□□ 1.32
LMNA-215ENST00000495341 OVOS2Q6IE36 1432 aa23.28■■□□□ 1.32
LMNA-215ENST00000495341 CAMKK2Q96RR4 588 aa23.28■■□□□ 1.32
LMNA-215ENST00000495341 LRRC37A3O60309 1634 aa23.28■■□□□ 1.32
LMNA-215ENST00000495341 ABCC6O95255 1503 aa23.27■■□□□ 1.32
LMNA-215ENST00000495341 NINLQ9Y2I6 1382 aa23.27■■□□□ 1.31
LMNA-215ENST00000495341 USP54Q70EL1 1684 aa23.26■■□□□ 1.31
LMNA-215ENST00000495341 C11orf95C9JLR9 678 aaPredicted RBP23.26■■□□□ 1.31
LMNA-215ENST00000495341 SLC24A1O60721 1099 aa23.26■■□□□ 1.31
LMNA-215ENST00000495341 R3HDM1Q15032 1099 aaKnown RBP23.26■■□□□ 1.31
LMNA-215ENST00000495341 CDCA7Q9BWT1 371 aaPredicted RBP23.26■■□□□ 1.31
LMNA-215ENST00000495341 CARD10Q9BWT7 1032 aa23.26■■□□□ 1.31
LMNA-215ENST00000495341 PARD3Q8TEW0 1356 aa23.26■■□□□ 1.31
LMNA-215ENST00000495341 RGPD5Q99666 1765 aa23.24■■□□□ 1.31
LMNA-215ENST00000495341 USP47Q96K76 1375 aa23.24■■□□□ 1.31
LMNA-215ENST00000495341 WNK3Q9BYP7 1800 aa23.23■■□□□ 1.31
LMNA-215ENST00000495341 CCDC7Q96M83 1385 aa23.23■■□□□ 1.31
LMNA-215ENST00000495341 TMF1P82094 1093 aa23.21■■□□□ 1.31
LMNA-215ENST00000495341 PEAK1Q9H792 1746 aa23.2■■□□□ 1.3
LMNA-215ENST00000495341 ERBB3P21860 1342 aa23.2■■□□□ 1.3
LMNA-215ENST00000495341 PCGF6Q9BYE7 350 aa23.2■■□□□ 1.3
LMNA-215ENST00000495341 LRP5O75197 1615 aa23.19■■□□□ 1.3
LMNA-215ENST00000495341 MARCH10Q8NA82 808 aaPredicted RBP23.19■■□□□ 1.3
LMNA-215ENST00000495341 NLRP2Q9NX02 1062 aa23.19■■□□□ 1.3
LMNA-215ENST00000495341 EXOC5O00471 708 aa23.18■■□□□ 1.3
LMNA-215ENST00000495341 ANKRD24Q8TF21 1146 aa23.18■■□□□ 1.3
LMNA-215ENST00000495341 LTN1O94822 1766 aa23.18■■□□□ 1.3
LMNA-215ENST00000495341 RREB1Q92766 1687 aa23.18■■□□□ 1.3
LMNA-215ENST00000495341 ANKRD36BQ8N2N9 1353 aa23.17■■□□□ 1.3
LMNA-215ENST00000495341 COG3Q96JB2 828 aa23.17■■□□□ 1.3
LMNA-215ENST00000495341 NBPF14Q5TI25 921 aa23.16■■□□□ 1.3
LMNA-215ENST00000495341 TNS2Q63HR2 1409 aa23.16■■□□□ 1.3
LMNA-215ENST00000495341 NUP188Q5SRE5 1749 aa23.15■■□□□ 1.3
LMNA-215ENST00000495341 BCL11BQ9C0K0 894 aaPredicted RBP23.14■■□□□ 1.29
LMNA-215ENST00000495341 TIMELESSQ9UNS1 1208 aa23.13■■□□□ 1.29
LMNA-215ENST00000495341 CLSPNQ9HAW4 1339 aa23.12■■□□□ 1.29
LMNA-215ENST00000495341 BCL9O00512 1426 aa23.12■■□□□ 1.29
LMNA-215ENST00000495341 CDCA8Q53HL2 280 aa23.12■■□□□ 1.29
LMNA-215ENST00000495341 IL2RBP14784 551 aa23.11■■□□□ 1.29
LMNA-215ENST00000495341 PTF1AQ7RTS3 328 aa23.11■■□□□ 1.29
LMNA-215ENST00000495341 IP6K1Q92551 441 aa23.11■■□□□ 1.29
LMNA-215ENST00000495341 LTV1Q96GA3 475 aaPredicted RBP23.11■■□□□ 1.29
LMNA-215ENST00000495341 PLSCR1O15162 318 aa23.1■■□□□ 1.29
LMNA-215ENST00000495341 SBF2Q86WG5 1849 aa23.1■■□□□ 1.29
LMNA-215ENST00000495341 AMPHP49418 695 aa23.09■■□□□ 1.29
LMNA-215ENST00000495341 MAP3K19Q56UN5 1328 aa23.08■■□□□ 1.29
LMNA-215ENST00000495341 GGNBP2Q9H3C7 697 aa23.08■■□□□ 1.29
LMNA-215ENST00000495341 FBLN1P23142 703 aa23.07■■□□□ 1.28
LMNA-215ENST00000495341 RGPD3A6NKT7 1758 aaPredicted RBP23.06■■□□□ 1.28
LMNA-215ENST00000495341 RGPD4Q7Z3J3 1758 aa23.06■■□□□ 1.28
LMNA-215ENST00000495341 HOXC9P31274 260 aa23.06■■□□□ 1.28
LMNA-215ENST00000495341 FYB1O15117 783 aa23.05■■□□□ 1.28
LMNA-215ENST00000495341 ACSBG1Q96GR2 724 aa23.05■■□□□ 1.28
LMNA-215ENST00000495341 KCNQ2O43526 872 aa23.03■■□□□ 1.28
LMNA-215ENST00000495341 RRS1Q15050 365 aaKnown RBP23.03■■□□□ 1.28
LMNA-215ENST00000495341 FAM208AQ9UK61 1670 aaKnown RBP23.03■■□□□ 1.28
LMNA-215ENST00000495341 RTL1A6NKG5 1358 aa23.02■■□□□ 1.28
LMNA-215ENST00000495341 ANO8Q9HCE9 1232 aaPredicted RBP23.02■■□□□ 1.28
LMNA-215ENST00000495341 TXNRD1Q16881 649 aa23■■□□□ 1.27
LMNA-215ENST00000495341 CCER1Q8TC90 406 aaPredicted RBP23■■□□□ 1.27
LMNA-215ENST00000495341 NHSQ6T4R5 1651 aa23■■□□□ 1.27
LMNA-215ENST00000495341 NSD3Q9BZ95 1437 aa22.99■■□□□ 1.27
LMNA-215ENST00000495341 PROM2Q8N271 834 aa22.99■■□□□ 1.27
LMNA-215ENST00000495341 DDX54Q8TDD1 881 aaKnown RBP22.99■■□□□ 1.27
LMNA-215ENST00000495341 MYOM1P52179 1685 aa22.99■■□□□ 1.27
LMNA-215ENST00000495341 KIF20BQ96Q89 1820 aa22.98■■□□□ 1.27
LMNA-215ENST00000495341 SMG6Q86US8 1419 aaKnown RBP22.98■■□□□ 1.27
LMNA-215ENST00000495341 POLR3GLQ9BT43 218 aa22.97■■□□□ 1.27
LMNA-215ENST00000495341 CARD14Q9BXL6 1004 aa22.96■■□□□ 1.27
LMNA-215ENST00000495341 SPON1Q9HCB6 807 aa22.96■■□□□ 1.27
LMNA-215ENST00000495341 STK32BQ9NY57 414 aa22.96■■□□□ 1.27
LMNA-215ENST00000495341 PPP1R1BQ9UD71 204 aaPredicted RBP22.95■■□□□ 1.26
LMNA-215ENST00000495341 USHBP1Q8N6Y0 703 aa22.94■■□□□ 1.26
LMNA-215ENST00000495341 MEGF6O75095 1541 aa22.92■■□□□ 1.26
LMNA-215ENST00000495341 FLT4P35916 1363 aa22.92■■□□□ 1.26
LMNA-215ENST00000495341 NBPF6Q5VWK0 638 aa22.92■■□□□ 1.26
LMNA-215ENST00000495341 ZCRB1Q8TBF4 217 aaKnown RBP22.92■■□□□ 1.26
LMNA-215ENST00000495341 NBPF4Q96M43 638 aa22.92■■□□□ 1.26
LMNA-215ENST00000495341 EIF4G2P78344 907 aaKnown RBP eCLIP22.91■■□□□ 1.26
LMNA-215ENST00000495341 RGPD2P0DJD1 1756 aa22.91■■□□□ 1.26
LMNA-215ENST00000495341 INSRP06213 1382 aa22.9■■□□□ 1.26
LMNA-215ENST00000495341 SLC15A2Q16348 729 aa22.9■■□□□ 1.26
LMNA-215ENST00000495341 HSP90AB2PQ58FF8 381 aa22.9■■□□□ 1.26
LMNA-215ENST00000495341 RAPGEF4Q8WZA2 1011 aa22.9■■□□□ 1.26
LMNA-215ENST00000495341 SYTL4Q96C24 671 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms