RNA–Protein interactions for RNA: ENST00000495190.1

VPS8-226, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 756 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-226ENST00000495190 ATP9BO43861 1147 aa11.18□□□□□ -0.62
VPS8-226ENST00000495190 MPNDQ8N594 471 aa11.18□□□□□ -0.62
VPS8-226ENST00000495190 PKD2L1Q9P0L9 805 aa11.18□□□□□ -0.62
VPS8-226ENST00000495190 MAP4K5Q9Y4K4 846 aa11.18□□□□□ -0.62
VPS8-226ENST00000495190 MAFBQ9Y5Q3 323 aaPredicted RBP11.18□□□□□ -0.62
VPS8-226ENST00000495190 ZNF697Q5TEC3 545 aa11.17□□□□□ -0.62
VPS8-226ENST00000495190 CDV3Q9UKY7 258 aaKnown RBP11.17□□□□□ -0.62
VPS8-226ENST00000495190 GRM5P41594 1212 aa11.16□□□□□ -0.62
VPS8-226ENST00000495190 SLFNL1Q499Z3 407 aa11.16□□□□□ -0.62
VPS8-226ENST00000495190 CCDC85AQ96PX6 553 aaPredicted RBP11.16□□□□□ -0.62
VPS8-226ENST00000495190 NBPF20Q3BBV1 942 aa11.15□□□□□ -0.62
VPS8-226ENST00000495190 TRAF7Q6Q0C0 670 aa11.15□□□□□ -0.62
VPS8-226ENST00000495190 RNF135Q8IUD6 432 aa11.15□□□□□ -0.62
VPS8-226ENST00000495190 KCTD15Q96SI1 283 aaPredicted RBP11.15□□□□□ -0.62
VPS8-226ENST00000495190 TLL2Q9Y6L7 1015 aa11.15□□□□□ -0.62
VPS8-226ENST00000495190 SKIP12755 728 aa11.14□□□□□ -0.63
VPS8-226ENST00000495190 RFX1P22670 979 aa11.14□□□□□ -0.63
VPS8-226ENST00000495190 LMOD1P29536 600 aaPredicted RBP11.14□□□□□ -0.63
VPS8-226ENST00000495190 GDF9O60383 454 aa11.13□□□□□ -0.63
VPS8-226ENST00000495190 VASH1Q7L8A9 365 aaPredicted RBP11.13□□□□□ -0.63
VPS8-226ENST00000495190 PLPP7Q8NBV4 271 aa11.13□□□□□ -0.63
VPS8-226ENST00000495190 USP17L5A8MUK1 530 aa11.12□□□□□ -0.63
VPS8-226ENST00000495190 INTS6LQ5JSJ4 861 aaKnown RBP11.12□□□□□ -0.63
VPS8-226ENST00000495190 TRIM67Q6ZTA4 783 aa11.12□□□□□ -0.63
VPS8-226ENST00000495190 PLEKHM2Q8IWE5 1019 aa11.12□□□□□ -0.63
VPS8-226ENST00000495190 SEPT12Q8IYM1 358 aa11.12□□□□□ -0.63
VPS8-226ENST00000495190 ARXQ96QS3 562 aa11.12□□□□□ -0.63
VPS8-226ENST00000495190 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.11□□□□□ -0.63
VPS8-226ENST00000495190 FOXC1Q12948 553 aa11.11□□□□□ -0.63
VPS8-226ENST00000495190 ARID5BQ14865 1188 aa11.11□□□□□ -0.63
VPS8-226ENST00000495190 DEPDC4Q8N2C3 294 aa11.11□□□□□ -0.63
VPS8-226ENST00000495190 USP17L3A6NCW0 530 aa11.1□□□□□ -0.63
VPS8-226ENST00000495190 USP17L4A6NCW7 530 aa11.1□□□□□ -0.63
VPS8-226ENST00000495190 MAP7D1Q3KQU3 841 aa11.1□□□□□ -0.63
VPS8-226ENST00000495190 KANK4Q5T7N3 995 aaPredicted RBP11.1□□□□□ -0.63
VPS8-226ENST00000495190 RNF20Q5VTR2 975 aa11.1□□□□□ -0.63
VPS8-226ENST00000495190 USP17L2Q6R6M4 530 aa11.1□□□□□ -0.63
VPS8-226ENST00000495190 USP17L1Q7RTZ2 530 aa11.1□□□□□ -0.63
VPS8-226ENST00000495190 CDCA7Q9BWT1 371 aaPredicted RBP11.1□□□□□ -0.63
VPS8-226ENST00000495190 ADH1CP00326 375 aa11.09□□□□□ -0.63
VPS8-226ENST00000495190 PBXIP1Q96AQ6 731 aa11.09□□□□□ -0.63
VPS8-226ENST00000495190 PPP1R15AO75807 674 aaPredicted RBP11.08□□□□□ -0.64
VPS8-226ENST00000495190 NCOA4Q13772 614 aa11.08□□□□□ -0.64
VPS8-226ENST00000495190 ERVH48-1M5A8F1 160 aa11.07□□□□□ -0.64
VPS8-226ENST00000495190 LZTS3O60299 673 aaPredicted RBP11.07□□□□□ -0.64
VPS8-226ENST00000495190 NR3C2P08235 984 aa11.07□□□□□ -0.64
VPS8-226ENST00000495190 FSHRP23945 695 aa11.07□□□□□ -0.64
VPS8-226ENST00000495190 RAB15P59190 212 aa11.06□□□□□ -0.64
VPS8-226ENST00000495190 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
VPS8-226ENST00000495190 SNIP1Q8TAD8 396 aaKnown RBP11.06□□□□□ -0.64
VPS8-226ENST00000495190 TOR4AQ9NXH8 423 aa11.06□□□□□ -0.64
VPS8-226ENST00000495190 DOLKQ9UPQ8 538 aa11.06□□□□□ -0.64
VPS8-226ENST00000495190 TNFRSF10AO00220 468 aa11.05□□□□□ -0.64
VPS8-226ENST00000495190 RGS20O76081 388 aa11.05□□□□□ -0.64
VPS8-226ENST00000495190 ALDH1A1P00352 501 aa11.05□□□□□ -0.64
VPS8-226ENST00000495190 PRR20EP86478 221 aa11.05□□□□□ -0.64
VPS8-226ENST00000495190 PRR20CP86479 221 aa11.05□□□□□ -0.64
VPS8-226ENST00000495190 PRR20DP86480 221 aa11.05□□□□□ -0.64
VPS8-226ENST00000495190 PRR20BP86481 221 aa11.05□□□□□ -0.64
VPS8-226ENST00000495190 PRR20AP86496 221 aa11.05□□□□□ -0.64
VPS8-226ENST00000495190 NR5A1Q13285 461 aa11.05□□□□□ -0.64
VPS8-226ENST00000495190 CDCA8Q53HL2 280 aa11.05□□□□□ -0.64
VPS8-226ENST00000495190 PCDHB11Q9Y5F2 797 aa11.05□□□□□ -0.64
VPS8-226ENST00000495190 VRTNQ9H8Y1 702 aa11.04□□□□□ -0.64
VPS8-226ENST00000495190 TMPRSS4Q9NRS4 437 aa11.04□□□□□ -0.64
VPS8-226ENST00000495190 MKRN1Q9UHC7 482 aaKnown RBP11.04□□□□□ -0.64
VPS8-226ENST00000495190 J3QL48 77 aa11.03□□□□□ -0.64
VPS8-226ENST00000495190 SCTRP47872 440 aa11.03□□□□□ -0.64
VPS8-226ENST00000495190 ATG7O95352 703 aa11.02□□□□□ -0.65
VPS8-226ENST00000495190 EML3Q32P44 896 aa11.02□□□□□ -0.65
VPS8-226ENST00000495190 OXLD1Q5BKU9 147 aa11.02□□□□□ -0.65
VPS8-226ENST00000495190 HOMEZQ8IX15 550 aa11.02□□□□□ -0.65
VPS8-226ENST00000495190 CCDC116Q8IYX3 515 aa11.02□□□□□ -0.65
VPS8-226ENST00000495190 SMPD1P17405 629 aa11.01□□□□□ -0.65
VPS8-226ENST00000495190 PPP1R26Q5T8A7 1209 aaPredicted RBP11.01□□□□□ -0.65
VPS8-226ENST00000495190 LILRA1O75019 489 aa11□□□□□ -0.65
VPS8-226ENST00000495190 ERVK-9P63128 1117 aa11□□□□□ -0.65
VPS8-226ENST00000495190 CLDN10P78369 228 aa11□□□□□ -0.65
VPS8-226ENST00000495190 NNTQ13423 1086 aa11□□□□□ -0.65
VPS8-226ENST00000495190 CYP4X1Q8N118 509 aa11□□□□□ -0.65
VPS8-226ENST00000495190 KLF16Q9BXK1 252 aaPredicted RBP11□□□□□ -0.65
VPS8-226ENST00000495190 PCDHGA11Q9Y5H2 935 aa11□□□□□ -0.65
VPS8-226ENST00000495190 ATP5J2-PTCD1G3V325 749 aa10.99□□□□□ -0.65
VPS8-226ENST00000495190 ZBTB7BO15156 539 aaPredicted RBP10.99□□□□□ -0.65
VPS8-226ENST00000495190 DHX9Q08211 1270 aaKnown RBP10.99□□□□□ -0.65
VPS8-226ENST00000495190 USP4Q13107 963 aa10.99□□□□□ -0.65
VPS8-226ENST00000495190 CRTC2Q53ET0 693 aaPredicted RBP10.99□□□□□ -0.65
VPS8-226ENST00000495190 ZNF784Q8NCA9 323 aaPredicted RBP10.99□□□□□ -0.65
VPS8-226ENST00000495190 NOD1Q9Y239 953 aa10.99□□□□□ -0.65
VPS8-226ENST00000495190 TTC24A2A3L6 582 aaPredicted RBP10.98□□□□□ -0.65
VPS8-226ENST00000495190 PTK7Q13308 1070 aa10.98□□□□□ -0.65
VPS8-226ENST00000495190 WASF2Q9Y6W5 498 aa10.98□□□□□ -0.65
VPS8-226ENST00000495190 FAM196BA6NMK8 535 aa10.97□□□□□ -0.65
VPS8-226ENST00000495190 DKK1O94907 266 aa10.97□□□□□ -0.65
VPS8-226ENST00000495190 CC2D2BQ6DHV5 1058 aa10.97□□□□□ -0.65
VPS8-226ENST00000495190 OGFOD1Q8N543 542 aa10.97□□□□□ -0.65
VPS8-226ENST00000495190 RETREG2Q8NC44 543 aa10.97□□□□□ -0.65
VPS8-226ENST00000495190 CYLDQ9NQC7 956 aa10.97□□□□□ -0.65
VPS8-226ENST00000495190 KIAA1024Q9UPX6 916 aa10.97□□□□□ -0.65
VPS8-226ENST00000495190 ACIN1Q9UKV3 1341 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms