RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 EDC4Q6P2E9 1401 aaKnown RBP14.93□□□□□ -0.02
NELFE-213ENST00000494956 SF3B2Q13435 895 aaKnown RBP14.93□□□□□ -0.02
NELFE-213ENST00000494956 KCNH5Q8NCM2 988 aa14.93□□□□□ -0.02
NELFE-213ENST00000494956 CCER1Q8TC90 406 aaPredicted RBP14.93□□□□□ -0.02
NELFE-213ENST00000494956 TNS1Q9HBL0 1735 aaKnown RBP14.92□□□□□ -0.02
NELFE-213ENST00000494956 WNK3Q9BYP7 1800 aa14.92□□□□□ -0.02
NELFE-213ENST00000494956 TOM1L2Q6ZVM7 507 aa14.92□□□□□ -0.02
NELFE-213ENST00000494956 PUS7Q96PZ0 661 aaKnown RBP14.92□□□□□ -0.02
NELFE-213ENST00000494956 TERF2IPQ9NYB0 399 aa14.92□□□□□ -0.02
NELFE-213ENST00000494956 USP31Q70CQ4 1352 aa14.92□□□□□ -0.02
NELFE-213ENST00000494956 RGPD1P0DJD0 1748 aa14.92□□□□□ -0.02
NELFE-213ENST00000494956 PARP4Q9UKK3 1724 aaKnown RBP14.92□□□□□ -0.02
NELFE-213ENST00000494956 CLSPNQ9HAW4 1339 aa14.92□□□□□ -0.02
NELFE-213ENST00000494956 TRIM37O94972 964 aa14.91□□□□□ -0.02
NELFE-213ENST00000494956 FBLN1P23142 703 aa14.91□□□□□ -0.02
NELFE-213ENST00000494956 CSB-PGBD3P0DP91 1061 aa14.9□□□□□ -0.02
NELFE-213ENST00000494956 TMF1P82094 1093 aa14.9□□□□□ -0.02
NELFE-213ENST00000494956 EN1Q05925 392 aaPredicted RBP14.9□□□□□ -0.02
NELFE-213ENST00000494956 LRRC37A3O60309 1634 aa14.9□□□□□ -0.02
NELFE-213ENST00000494956 WDR17Q8IZU2 1322 aa14.9□□□□□ -0.02
NELFE-213ENST00000494956 PDE3BQ13370 1112 aa14.89□□□□□ -0.03
NELFE-213ENST00000494956 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
NELFE-213ENST00000494956 OVOS2A0A0J9YW53 1432 aa14.89□□□□□ -0.03
NELFE-213ENST00000494956 OVOS2Q6IE36 1432 aa14.89□□□□□ -0.03
NELFE-213ENST00000494956 MYOM1P52179 1685 aa14.88□□□□□ -0.03
NELFE-213ENST00000494956 TIMELESSQ9UNS1 1208 aa14.88□□□□□ -0.03
NELFE-213ENST00000494956 THRAP3Q9Y2W1 955 aaKnown RBP14.88□□□□□ -0.03
NELFE-213ENST00000494956 BAG6P46379 1132 aa14.87□□□□□ -0.03
NELFE-213ENST00000494956 FAM196AQ6ZSG2 479 aa14.87□□□□□ -0.03
NELFE-213ENST00000494956 ANKRD36BQ8N2N9 1353 aa14.86□□□□□ -0.03
NELFE-213ENST00000494956 NINLQ9Y2I6 1382 aa14.86□□□□□ -0.03
NELFE-213ENST00000494956 PEAK1Q9H792 1746 aa14.86□□□□□ -0.03
NELFE-213ENST00000494956 EZH2Q15910 746 aaKnown RBP14.85□□□□□ -0.03
NELFE-213ENST00000494956 GGNBP2Q9H3C7 697 aa14.85□□□□□ -0.03
NELFE-213ENST00000494956 SBF2Q86WG5 1849 aa14.85□□□□□ -0.03
NELFE-213ENST00000494956 RGPD2P0DJD1 1756 aa14.84□□□□□ -0.03
NELFE-213ENST00000494956 PSDA5PKW4 1024 aaPredicted RBP14.84□□□□□ -0.03
NELFE-213ENST00000494956 PTF1AQ7RTS3 328 aa14.84□□□□□ -0.03
NELFE-213ENST00000494956 CARD10Q9BWT7 1032 aa14.84□□□□□ -0.03
NELFE-213ENST00000494956 DISP2A7MBM2 1401 aa14.83□□□□□ -0.03
NELFE-213ENST00000494956 KIF20BQ96Q89 1820 aa14.83□□□□□ -0.04
NELFE-213ENST00000494956 ABCC6O95255 1503 aa14.83□□□□□ -0.04
NELFE-213ENST00000494956 SLC24A1O60721 1099 aa14.83□□□□□ -0.04
NELFE-213ENST00000494956 APBA3O96018 575 aa14.83□□□□□ -0.04
NELFE-213ENST00000494956 DDB1Q16531 1140 aa14.83□□□□□ -0.04
NELFE-213ENST00000494956 ANKRD24Q8TF21 1146 aa14.83□□□□□ -0.04
NELFE-213ENST00000494956 LTV1Q96GA3 475 aaPredicted RBP14.83□□□□□ -0.04
NELFE-213ENST00000494956 COG3Q96JB2 828 aa14.83□□□□□ -0.04
NELFE-213ENST00000494956 POLR3GLQ9BT43 218 aa14.83□□□□□ -0.04
NELFE-213ENST00000494956 NLRP2Q9NX02 1062 aa14.83□□□□□ -0.04
NELFE-213ENST00000494956 ERBB3P21860 1342 aa14.83□□□□□ -0.04
NELFE-213ENST00000494956 FYB1O15117 783 aa14.82□□□□□ -0.04
NELFE-213ENST00000494956 HSPA5P11021 654 aaKnown RBP14.82□□□□□ -0.04
NELFE-213ENST00000494956 MARCH10Q8NA82 808 aaPredicted RBP14.82□□□□□ -0.04
NELFE-213ENST00000494956 CARD14Q9BXL6 1004 aa14.82□□□□□ -0.04
NELFE-213ENST00000494956 MAP3K19Q56UN5 1328 aa14.82□□□□□ -0.04
NELFE-213ENST00000494956 RRS1Q15050 365 aaKnown RBP14.81□□□□□ -0.04
NELFE-213ENST00000494956 CAMKK2Q96RR4 588 aa14.81□□□□□ -0.04
NELFE-213ENST00000494956 OVOS2A0A0G2JMS6 1433 aa14.8□□□□□ -0.04
NELFE-213ENST00000494956 HOXC9P31274 260 aa14.79□□□□□ -0.04
NELFE-213ENST00000494956 CDCA8Q53HL2 280 aa14.79□□□□□ -0.04
NELFE-213ENST00000494956 IP6K1Q92551 441 aa14.79□□□□□ -0.04
NELFE-213ENST00000494956 RREB1Q92766 1687 aa14.79□□□□□ -0.04
NELFE-213ENST00000494956 CCDC7Q96M83 1385 aa14.79□□□□□ -0.04
NELFE-213ENST00000494956 NSD3Q9BZ95 1437 aa14.79□□□□□ -0.04
NELFE-213ENST00000494956 NUP188Q5SRE5 1749 aa14.78□□□□□ -0.04
NELFE-213ENST00000494956 EXOC5O00471 708 aa14.77□□□□□ -0.05
NELFE-213ENST00000494956 AMPHP49418 695 aa14.77□□□□□ -0.05
NELFE-213ENST00000494956 EIF4G2P78344 907 aaKnown RBP eCLIP14.77□□□□□ -0.05
NELFE-213ENST00000494956 R3HDM1Q15032 1099 aaKnown RBP14.77□□□□□ -0.05
NELFE-213ENST00000494956 IL2RBP14784 551 aa14.76□□□□□ -0.05
NELFE-213ENST00000494956 CDCA7Q9BWT1 371 aaPredicted RBP14.76□□□□□ -0.05
NELFE-213ENST00000494956 TNS2Q63HR2 1409 aa14.75□□□□□ -0.05
NELFE-213ENST00000494956 FAM208AQ9UK61 1670 aaKnown RBP14.75□□□□□ -0.05
NELFE-213ENST00000494956 C11orf95C9JLR9 678 aaPredicted RBP14.75□□□□□ -0.05
NELFE-213ENST00000494956 KAT6BQ8WYB5 2073 aa14.74□□□□□ -0.05
NELFE-213ENST00000494956 KCNQ2O43526 872 aa14.74□□□□□ -0.05
NELFE-213ENST00000494956 USHBP1Q8N6Y0 703 aa14.74□□□□□ -0.05
NELFE-213ENST00000494956 ACSBG1Q96GR2 724 aa14.74□□□□□ -0.05
NELFE-213ENST00000494956 EMILIN1Q9Y6C2 1016 aa14.73□□□□□ -0.05
NELFE-213ENST00000494956 MAP2P11137 1827 aaKnown RBP14.72□□□□□ -0.05
NELFE-213ENST00000494956 HSP90AB2PQ58FF8 381 aa14.72□□□□□ -0.05
NELFE-213ENST00000494956 NBPF6Q5VWK0 638 aa14.72□□□□□ -0.05
NELFE-213ENST00000494956 NBPF4Q96M43 638 aa14.72□□□□□ -0.05
NELFE-213ENST00000494956 SHANK3Q9BYB0 1731 aa14.72□□□□□ -0.05
NELFE-213ENST00000494956 BCL11BQ9C0K0 894 aaPredicted RBP14.71□□□□□ -0.05
NELFE-213ENST00000494956 BCL9O00512 1426 aa14.7□□□□□ -0.06
NELFE-213ENST00000494956 PROM2Q8N271 834 aa14.7□□□□□ -0.06
NELFE-213ENST00000494956 DDX54Q8TDD1 881 aaKnown RBP14.7□□□□□ -0.06
NELFE-213ENST00000494956 NHSQ6T4R5 1651 aa14.7□□□□□ -0.06
NELFE-213ENST00000494956 MEGF6O75095 1541 aa14.7□□□□□ -0.06
NELFE-213ENST00000494956 RTL1A6NKG5 1358 aa14.7□□□□□ -0.06
NELFE-213ENST00000494956 PARD3Q8TEW0 1356 aa14.7□□□□□ -0.06
NELFE-213ENST00000494956 PPM1GO15355 546 aaPredicted RBP14.69□□□□□ -0.06
NELFE-213ENST00000494956 PANK3Q9H999 370 aa14.69□□□□□ -0.06
NELFE-213ENST00000494956 RGPD3A6NKT7 1758 aaPredicted RBP14.69□□□□□ -0.06
NELFE-213ENST00000494956 RGPD4Q7Z3J3 1758 aa14.69□□□□□ -0.06
NELFE-213ENST00000494956 ANKRD26Q9UPS8 1709 aa14.69□□□□□ -0.06
NELFE-213ENST00000494956 BTAF1O14981 1849 aa14.69□□□□□ -0.06
NELFE-213ENST00000494956 LRP5O75197 1615 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms