RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 COL18A1P39060 1754 aa22.94■■□□□ 1.26
COL4A2-209ENST00000494852 WDR17Q8IZU2 1322 aa22.93■■□□□ 1.26
COL4A2-209ENST00000494852 ANO8Q9HCE9 1232 aaPredicted RBP22.92■■□□□ 1.26
COL4A2-209ENST00000494852 AXIN2Q9Y2T1 843 aa22.92■■□□□ 1.26
COL4A2-209ENST00000494852 QRICH2Q9H0J4 1663 aa22.92■■□□□ 1.26
COL4A2-209ENST00000494852 MARCH10Q8NA82 808 aaPredicted RBP22.91■■□□□ 1.26
COL4A2-209ENST00000494852 PTF1AQ7RTS3 328 aa22.9■■□□□ 1.26
COL4A2-209ENST00000494852 PROM2Q8N271 834 aa22.9■■□□□ 1.26
COL4A2-209ENST00000494852 CASZ1Q86V15 1759 aa22.9■■□□□ 1.26
COL4A2-209ENST00000494852 PIK3C2AO00443 1686 aa22.9■■□□□ 1.26
COL4A2-209ENST00000494852 ARHGEF25Q86VW2 580 aa22.89■■□□□ 1.25
COL4A2-209ENST00000494852 CPSF1Q10570 1443 aaKnown RBP22.89■■□□□ 1.25
COL4A2-209ENST00000494852 WNK3Q9BYP7 1800 aa22.89■■□□□ 1.25
COL4A2-209ENST00000494852 KCNH5Q8NCM2 988 aa22.88■■□□□ 1.25
COL4A2-209ENST00000494852 ZNF692Q9BU19 519 aaPredicted RBP22.88■■□□□ 1.25
COL4A2-209ENST00000494852 EVC2Q86UK5 1308 aa22.87■■□□□ 1.25
COL4A2-209ENST00000494852 CARD10Q9BWT7 1032 aa22.87■■□□□ 1.25
COL4A2-209ENST00000494852 PDGFDQ9GZP0 370 aaPredicted RBP22.85■■□□□ 1.25
COL4A2-209ENST00000494852 AKAP12Q02952 1782 aa22.85■■□□□ 1.25
COL4A2-209ENST00000494852 TTC21BQ7Z4L5 1316 aa22.84■■□□□ 1.25
COL4A2-209ENST00000494852 EXOC5O00471 708 aa22.83■■□□□ 1.25
COL4A2-209ENST00000494852 TTC21AQ8NDW8 1320 aa22.82■■□□□ 1.24
COL4A2-209ENST00000494852 TRPM1Q7Z4N2 1603 aa22.82■■□□□ 1.24
COL4A2-209ENST00000494852 ZBTB7AO95365 584 aa22.82■■□□□ 1.24
COL4A2-209ENST00000494852 CSB-PGBD3P0DP91 1061 aa22.82■■□□□ 1.24
COL4A2-209ENST00000494852 PTGER2P43116 358 aa22.82■■□□□ 1.24
COL4A2-209ENST00000494852 TXNRD1Q16881 649 aa22.82■■□□□ 1.24
COL4A2-209ENST00000494852 UTRNP46939 3433 aa22.82■■□□□ 1.24
COL4A2-209ENST00000494852 STK32BQ9NY57 414 aa22.81■■□□□ 1.24
COL4A2-209ENST00000494852 CCDC7Q96M83 1385 aa22.8■■□□□ 1.24
COL4A2-209ENST00000494852 SLC15A2Q16348 729 aa22.8■■□□□ 1.24
COL4A2-209ENST00000494852 RGPD5Q99666 1765 aa22.8■■□□□ 1.24
COL4A2-209ENST00000494852 ABCC6O95255 1503 aa22.79■■□□□ 1.24
COL4A2-209ENST00000494852 L3MBTL2Q969R5 705 aa22.79■■□□□ 1.24
COL4A2-209ENST00000494852 NFAT5O94916 1531 aa22.78■■□□□ 1.24
COL4A2-209ENST00000494852 ATF5Q9Y2D1 282 aaPredicted RBP22.78■■□□□ 1.24
COL4A2-209ENST00000494852 MYOM1P52179 1685 aa22.77■■□□□ 1.24
COL4A2-209ENST00000494852 SOX12O15370 315 aa22.77■■□□□ 1.24
COL4A2-209ENST00000494852 TNS2Q63HR2 1409 aa22.76■■□□□ 1.23
COL4A2-209ENST00000494852 MTFR1LQ9H019 292 aa22.76■■□□□ 1.23
COL4A2-209ENST00000494852 KTN1Q86UP2 1357 aaKnown RBP22.75■■□□□ 1.23
COL4A2-209ENST00000494852 SYT17Q9BSW7 474 aa22.74■■□□□ 1.23
COL4A2-209ENST00000494852 SGIP1Q9BQI5 828 aa22.73■■□□□ 1.23
COL4A2-209ENST00000494852 FHDC1Q9C0D6 1143 aaPredicted RBP22.73■■□□□ 1.23
COL4A2-209ENST00000494852 NHSQ6T4R5 1651 aa22.72■■□□□ 1.23
COL4A2-209ENST00000494852 ROCK2O75116 1388 aaKnown RBP22.72■■□□□ 1.23
COL4A2-209ENST00000494852 ZNF784Q8NCA9 323 aaPredicted RBP22.71■■□□□ 1.23
COL4A2-209ENST00000494852 USP31Q70CQ4 1352 aa22.71■■□□□ 1.23
COL4A2-209ENST00000494852 ERBB3P21860 1342 aa22.7■■□□□ 1.22
COL4A2-209ENST00000494852 ACSBG1Q96GR2 724 aa22.68■■□□□ 1.22
COL4A2-209ENST00000494852 MON2Q7Z3U7 1717 aa22.68■■□□□ 1.22
COL4A2-209ENST00000494852 USP54Q70EL1 1684 aa22.68■■□□□ 1.22
COL4A2-209ENST00000494852 IL2RBP14784 551 aa22.67■■□□□ 1.22
COL4A2-209ENST00000494852 NLRP2Q9NX02 1062 aa22.67■■□□□ 1.22
COL4A2-209ENST00000494852 PAPPAQ13219 1627 aa22.67■■□□□ 1.22
COL4A2-209ENST00000494852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.66■■□□□ 1.22
COL4A2-209ENST00000494852 ARXQ96QS3 562 aa22.66■■□□□ 1.22
COL4A2-209ENST00000494852 MAP3K5Q99683 1374 aa22.65■■□□□ 1.22
COL4A2-209ENST00000494852 SBNO2Q9Y2G9 1366 aa22.65■■□□□ 1.22
COL4A2-209ENST00000494852 SIN3AQ96ST3 1273 aa22.64■■□□□ 1.21
COL4A2-209ENST00000494852 CD163L1Q9NR16 1453 aa22.62■■□□□ 1.21
COL4A2-209ENST00000494852 NME9Q86XW9 330 aa22.62■■□□□ 1.21
COL4A2-209ENST00000494852 ANKRD24Q8TF21 1146 aa22.62■■□□□ 1.21
COL4A2-209ENST00000494852 BTAF1O14981 1849 aa22.61■■□□□ 1.21
COL4A2-209ENST00000494852 CHD4Q14839 1912 aa22.61■■□□□ 1.21
COL4A2-209ENST00000494852 LTN1O94822 1766 aa22.61■■□□□ 1.21
COL4A2-209ENST00000494852 ZNF827Q17R98 1081 aa22.6■■□□□ 1.21
COL4A2-209ENST00000494852 LRRC4BQ9NT99 713 aa22.6■■□□□ 1.21
COL4A2-209ENST00000494852 HDGFL2Q7Z4V5 671 aaPredicted RBP22.59■■□□□ 1.21
COL4A2-209ENST00000494852 NEUROD1Q13562 356 aa22.58■■□□□ 1.21
COL4A2-209ENST00000494852 SLC27A3Q5K4L6 730 aa22.58■■□□□ 1.21
COL4A2-209ENST00000494852 SLC16A10Q8TF71 515 aa22.58■■□□□ 1.21
COL4A2-209ENST00000494852 AKT1S1Q96B36 256 aa22.58■■□□□ 1.21
COL4A2-209ENST00000494852 EDC4Q6P2E9 1401 aaKnown RBP22.57■■□□□ 1.2
COL4A2-209ENST00000494852 TMC1Q8TDI8 760 aa22.56■■□□□ 1.2
COL4A2-209ENST00000494852 SLC12A5Q9H2X9 1139 aa22.55■■□□□ 1.2
COL4A2-209ENST00000494852 C1QTNF8P60827 252 aa22.54■■□□□ 1.2
COL4A2-209ENST00000494852 IP6K1Q92551 441 aa22.54■■□□□ 1.2
COL4A2-209ENST00000494852 TERF2IPQ9NYB0 399 aa22.54■■□□□ 1.2
COL4A2-209ENST00000494852 QSER1Q2KHR3 1735 aa22.54■■□□□ 1.2
COL4A2-209ENST00000494852 GPR162Q16538 588 aa22.53■■□□□ 1.2
COL4A2-209ENST00000494852 PUS7Q96PZ0 661 aaKnown RBP22.53■■□□□ 1.2
COL4A2-209ENST00000494852 CARD11Q9BXL7 1154 aa22.53■■□□□ 1.2
COL4A2-209ENST00000494852 POLD1P28340 1107 aa22.52■■□□□ 1.2
COL4A2-209ENST00000494852 DDX54Q8TDD1 881 aaKnown RBP22.52■■□□□ 1.2
COL4A2-209ENST00000494852 KAT6BQ8WYB5 2073 aa22.52■■□□□ 1.2
COL4A2-209ENST00000494852 COL24A1Q17RW2 1714 aa22.51■■□□□ 1.19
COL4A2-209ENST00000494852 PNPLA7Q6ZV29 1317 aa22.51■■□□□ 1.19
COL4A2-209ENST00000494852 A0A1W2PP64 1363 aa22.5■■□□□ 1.19
COL4A2-209ENST00000494852 GOLGB1Q14789 3259 aaKnown RBP22.5■■□□□ 1.19
COL4A2-209ENST00000494852 FAM208AQ9UK61 1670 aaKnown RBP22.5■■□□□ 1.19
COL4A2-209ENST00000494852 SENP3-EIF4A1A0A087X0R7 540 aa22.49■■□□□ 1.19
COL4A2-209ENST00000494852 ANKRD36BQ8N2N9 1353 aa22.49■■□□□ 1.19
COL4A2-209ENST00000494852 TFCP2L1Q9NZI6 479 aa22.48■■□□□ 1.19
COL4A2-209ENST00000494852 PRIM1P49642 420 aaKnown RBP22.47■■□□□ 1.19
COL4A2-209ENST00000494852 LTV1Q96GA3 475 aaPredicted RBP22.46■■□□□ 1.19
COL4A2-209ENST00000494852 KLHL34Q8N239 644 aa22.45■■□□□ 1.18
COL4A2-209ENST00000494852 SYTL4Q96C24 671 aaPredicted RBP22.45■■□□□ 1.18
COL4A2-209ENST00000494852 NSD2O96028 1365 aa22.44■■□□□ 1.18
COL4A2-209ENST00000494852 LY75O60449 1722 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms