RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 A0A1W2PP64 1363 aa16.58■□□□□ 0.24
VTI1A-208ENST00000494728 ABCC6O95255 1503 aa16.58■□□□□ 0.24
VTI1A-208ENST00000494728 TRIM37O94972 964 aa16.57■□□□□ 0.24
VTI1A-208ENST00000494728 ARHGEF25Q86VW2 580 aa16.57■□□□□ 0.24
VTI1A-208ENST00000494728 PSDA5PKW4 1024 aaPredicted RBP16.56■□□□□ 0.24
VTI1A-208ENST00000494728 TESK2Q96S53 571 aa16.56■□□□□ 0.24
VTI1A-208ENST00000494728 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
VTI1A-208ENST00000494728 RGPD3A6NKT7 1758 aaPredicted RBP16.56■□□□□ 0.24
VTI1A-208ENST00000494728 RGPD4Q7Z3J3 1758 aa16.56■□□□□ 0.24
VTI1A-208ENST00000494728 OVOS2A0A0J9YW53 1432 aa16.55■□□□□ 0.24
VTI1A-208ENST00000494728 OVOS2Q6IE36 1432 aa16.55■□□□□ 0.24
VTI1A-208ENST00000494728 NME9Q86XW9 330 aa16.55■□□□□ 0.24
VTI1A-208ENST00000494728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.55■□□□□ 0.24
VTI1A-208ENST00000494728 MYOM1P52179 1685 aa16.55■□□□□ 0.24
VTI1A-208ENST00000494728 EDC4Q6P2E9 1401 aaKnown RBP16.54■□□□□ 0.24
VTI1A-208ENST00000494728 USP31Q70CQ4 1352 aa16.54■□□□□ 0.24
VTI1A-208ENST00000494728 WDR17Q8IZU2 1322 aa16.54■□□□□ 0.24
VTI1A-208ENST00000494728 EZH2Q15910 746 aaKnown RBP16.54■□□□□ 0.24
VTI1A-208ENST00000494728 SLC12A5Q9H2X9 1139 aa16.54■□□□□ 0.24
VTI1A-208ENST00000494728 THRAP3Q9Y2W1 955 aaKnown RBP16.54■□□□□ 0.24
VTI1A-208ENST00000494728 FAM196AQ6ZSG2 479 aa16.53■□□□□ 0.24
VTI1A-208ENST00000494728 RGPD2P0DJD1 1756 aa16.53■□□□□ 0.24
VTI1A-208ENST00000494728 ST20-MTHFSA0A0A6YYL1 179 aa16.52■□□□□ 0.24
VTI1A-208ENST00000494728 PDE3BQ13370 1112 aa16.52■□□□□ 0.24
VTI1A-208ENST00000494728 TMC1Q8TDI8 760 aa16.52■□□□□ 0.24
VTI1A-208ENST00000494728 CAMKK2Q96RR4 588 aa16.52■□□□□ 0.24
VTI1A-208ENST00000494728 OVOS2A0A0G2JMS6 1433 aa16.52■□□□□ 0.23
VTI1A-208ENST00000494728 TOM1L2Q6ZVM7 507 aa16.51■□□□□ 0.23
VTI1A-208ENST00000494728 KCNH5Q8NCM2 988 aa16.51■□□□□ 0.23
VTI1A-208ENST00000494728 KIF20BQ96Q89 1820 aa16.51■□□□□ 0.23
VTI1A-208ENST00000494728 FAM208AQ9UK61 1670 aaKnown RBP16.5■□□□□ 0.23
VTI1A-208ENST00000494728 PTF1AQ7RTS3 328 aa16.49■□□□□ 0.23
VTI1A-208ENST00000494728 USP47Q96K76 1375 aa16.49■□□□□ 0.23
VTI1A-208ENST00000494728 APBA3O96018 575 aa16.48■□□□□ 0.23
VTI1A-208ENST00000494728 R3HDM1Q15032 1099 aaKnown RBP16.48■□□□□ 0.23
VTI1A-208ENST00000494728 NHSQ6T4R5 1651 aa16.48■□□□□ 0.23
VTI1A-208ENST00000494728 SHANK3Q9BYB0 1731 aa16.48■□□□□ 0.23
VTI1A-208ENST00000494728 TNS2Q63HR2 1409 aa16.47■□□□□ 0.23
VTI1A-208ENST00000494728 HDGFL2Q7Z4V5 671 aaPredicted RBP16.47■□□□□ 0.23
VTI1A-208ENST00000494728 PARD3Q8TEW0 1356 aa16.47■□□□□ 0.23
VTI1A-208ENST00000494728 ERBB3P21860 1342 aa16.46■□□□□ 0.23
VTI1A-208ENST00000494728 DDB1Q16531 1140 aa16.46■□□□□ 0.23
VTI1A-208ENST00000494728 MARCH10Q8NA82 808 aaPredicted RBP16.46■□□□□ 0.23
VTI1A-208ENST00000494728 CARD10Q9BWT7 1032 aa16.46■□□□□ 0.23
VTI1A-208ENST00000494728 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
VTI1A-208ENST00000494728 PIAS4Q8N2W9 510 aaPredicted RBP16.45■□□□□ 0.22
VTI1A-208ENST00000494728 PUS7Q96PZ0 661 aaKnown RBP16.45■□□□□ 0.22
VTI1A-208ENST00000494728 NINLQ9Y2I6 1382 aa16.45■□□□□ 0.22
VTI1A-208ENST00000494728 CASZ1Q86V15 1759 aa16.44■□□□□ 0.22
VTI1A-208ENST00000494728 CCDC7Q96M83 1385 aa16.44■□□□□ 0.22
VTI1A-208ENST00000494728 TERF2IPQ9NYB0 399 aa16.44■□□□□ 0.22
VTI1A-208ENST00000494728 BTAF1O14981 1849 aa16.44■□□□□ 0.22
VTI1A-208ENST00000494728 ANKRD36BQ8N2N9 1353 aa16.43■□□□□ 0.22
VTI1A-208ENST00000494728 BCL9O00512 1426 aa16.43■□□□□ 0.22
VTI1A-208ENST00000494728 FBLN1P23142 703 aa16.42■□□□□ 0.22
VTI1A-208ENST00000494728 KAT6BQ8WYB5 2073 aa16.42■□□□□ 0.22
VTI1A-208ENST00000494728 ANKRD24Q8TF21 1146 aa16.4■□□□□ 0.22
VTI1A-208ENST00000494728 DOT1LQ8TEK3 1739 aa16.39■□□□□ 0.21
VTI1A-208ENST00000494728 CDCA7Q9BWT1 371 aaPredicted RBP16.39■□□□□ 0.21
VTI1A-208ENST00000494728 ANKRD26Q9UPS8 1709 aa16.39■□□□□ 0.21
VTI1A-208ENST00000494728 PAPPAQ13219 1627 aa16.38■□□□□ 0.21
VTI1A-208ENST00000494728 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
VTI1A-208ENST00000494728 NLRP2Q9NX02 1062 aa16.38■□□□□ 0.21
VTI1A-208ENST00000494728 MAP3K19Q56UN5 1328 aa16.38■□□□□ 0.21
VTI1A-208ENST00000494728 BCL11BQ9C0K0 894 aaPredicted RBP16.37■□□□□ 0.21
VTI1A-208ENST00000494728 UTRNP46939 3433 aa16.37■□□□□ 0.21
VTI1A-208ENST00000494728 PCGF6Q9BYE7 350 aa16.36■□□□□ 0.21
VTI1A-208ENST00000494728 MEGF6O75095 1541 aa16.35■□□□□ 0.21
VTI1A-208ENST00000494728 C11orf95C9JLR9 678 aaPredicted RBP16.35■□□□□ 0.21
VTI1A-208ENST00000494728 KCNQ2O43526 872 aa16.35■□□□□ 0.21
VTI1A-208ENST00000494728 TMF1P82094 1093 aa16.35■□□□□ 0.21
VTI1A-208ENST00000494728 PROM2Q8N271 834 aa16.35■□□□□ 0.21
VTI1A-208ENST00000494728 IP6K1Q92551 441 aa16.35■□□□□ 0.21
VTI1A-208ENST00000494728 TUBGCP6Q96RT7 1819 aa16.34■□□□□ 0.21
VTI1A-208ENST00000494728 EXOC5O00471 708 aa16.34■□□□□ 0.21
VTI1A-208ENST00000494728 PLSCR1O15162 318 aa16.34■□□□□ 0.21
VTI1A-208ENST00000494728 IL2RBP14784 551 aa16.34■□□□□ 0.21
VTI1A-208ENST00000494728 LTV1Q96GA3 475 aaPredicted RBP16.34■□□□□ 0.21
VTI1A-208ENST00000494728 COG3Q96JB2 828 aa16.34■□□□□ 0.21
VTI1A-208ENST00000494728 GGNBP2Q9H3C7 697 aa16.34■□□□□ 0.21
VTI1A-208ENST00000494728 FYB1O15117 783 aa16.33■□□□□ 0.2
VTI1A-208ENST00000494728 HOXC9P31274 260 aa16.33■□□□□ 0.2
VTI1A-208ENST00000494728 RTL1A6NKG5 1358 aa16.32■□□□□ 0.2
VTI1A-208ENST00000494728 MAP2P11137 1827 aaKnown RBP16.32■□□□□ 0.2
VTI1A-208ENST00000494728 RRS1Q15050 365 aaKnown RBP16.32■□□□□ 0.2
VTI1A-208ENST00000494728 ACSBG1Q96GR2 724 aa16.32■□□□□ 0.2
VTI1A-208ENST00000494728 NSD3Q9BZ95 1437 aa16.32■□□□□ 0.2
VTI1A-208ENST00000494728 PDGFDQ9GZP0 370 aaPredicted RBP16.32■□□□□ 0.2
VTI1A-208ENST00000494728 CLSPNQ9HAW4 1339 aa16.32■□□□□ 0.2
VTI1A-208ENST00000494728 LY75O60449 1722 aa16.31■□□□□ 0.2
VTI1A-208ENST00000494728 CARD14Q9BXL6 1004 aa16.31■□□□□ 0.2
VTI1A-208ENST00000494728 TOGARAM1Q9Y4F4 1720 aa16.3■□□□□ 0.2
VTI1A-208ENST00000494728 GOLGB1Q14789 3259 aaKnown RBP16.29■□□□□ 0.2
VTI1A-208ENST00000494728 PKD1L3Q7Z443 1732 aa16.29■□□□□ 0.2
VTI1A-208ENST00000494728 SLC24A1O60721 1099 aa16.29■□□□□ 0.2
VTI1A-208ENST00000494728 NBPF14Q5TI25 921 aa16.29■□□□□ 0.2
VTI1A-208ENST00000494728 TXNRD1Q16881 649 aa16.28■□□□□ 0.2
VTI1A-208ENST00000494728 TIMELESSQ9UNS1 1208 aa16.28■□□□□ 0.2
VTI1A-208ENST00000494728 QSER1Q2KHR3 1735 aa16.28■□□□□ 0.2
VTI1A-208ENST00000494728 AMPHP49418 695 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms